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Csor.00g283340.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATAAAGAGTTTGGCATTGCAAGCTCTTCTTATAGCCGGCTTGTTGATGGCGTCCCGATTTACACTCACCGCCTCCATCCAACCGTTTCTCATAAGAACGTACTTGCTCTCCGTTTCCTCTCCAAGCCGTTTACCAAAATCACTTCCCTGCCCCCTCTGGTCATCTTCCTTCTCCTTCTGCCTTCACAACCTTCACAACTCTGTTACCTCCTCTTCCATCCCTCACTTCTCTTCCTGTTCTTCGATTTCTGCTCCGTCAATGGCTGCTTCTGCCGCCCTGGATGAAATTCCGCAATCGAATCCTCTCCTCCAAAATTTTTATTTTCCGCCTTTCGATGCCGTGGAAGCTAAGCATGTTCGTCCAGGAATTCTTACGCTTTTGAAGACGCTCGTATGCCCCTTTCCCTGTTCTTAGTTTCCCTCCCGTCGTGCTTTATTTTATTTTATTATCTTTTTCTTGGCTTTATTTGTTTACCTTTTGGTCTCTGATTAATCTTTTGAGTTTGACTTGCCTTTTCCCTTTCCTTCTTTAATTGGGTAACGCCTTCGGGTCGATTGTATGCATGCGGGAATTTCAGGAGGGTGATTTGGAGGAATTGGAGCGAACAGTGGAGCCATCTTGGTCAAAACTGGTTGAGCCATTAGAGAAGATTACGGACCGGTTGAATGTGGTTTGGGGTATTGTCAACCACCTCAAGTCTGTTAAGGATACTGCTGATCTTCGGATCGCTATCGAAGAAGTCCAGGTATATTCACCATTTTTGGAGGAGCGTTTACGTTGTTTATATTGGAGGTATCAGTTGAGTGGGGAGATCTAAGAAATCATCAGCATAATTTCGAGTGTTTTTTGTTTAAAAATTGTTCGTGCTACATTTTGAGAACGATAATAGAAATTCTTCAGCCCTCCCTAACTGATTATTGCCCATAAAATTAGGACAAAGTTGGAGCAAACCTTGGAAAATTATTCGTCATTCAGTTGACCAAGAAAGAAATAAATAAACCAGCACTAGAAGTTACTGTGGCAAAATGTCCATTATGGCTTGTTGGGACTTCCCGACTTTACTAATTAAATCTGCTTTTGGTCACGAGACTTGAGTTATCTTACTCATTTCTTCTACAATACTAATGTTACTTATTGTGGCTGCAGCCGGAGAAAGTAAAATTTCAGCTTAGGTTGGGGCAAAGCAAACCCATTTACAATGCTTTTAAAGCTATTCGTGAATCTCCCGAGTGGAACACACTCAATGATGCTCGGAAACGCATAGTGGAATGTCAGTATTATTTATTTATTTTTGTATCTTGTCAATTAAAAGGATTATGATGTTCGTAGTTATTTTTTTTTTGTTAACACTGCATCACTGCTACTTCAAAGAGTTTGGTTTCTCGTAAAAAAATTGTGACACTTCAACACGAGTTAGAAAATTCATGTATTTTATTATTACTTTTTTAACACTTTCCTGGACTTTACTTGACCTCGAGCAGCTCAAATAAAAGAGGCTCTTCTTCATGGTGTTACTCTTGAAGATGATAAAAGGGATAATTTCAACAAAATTCAGCAGGTGAGTTTTCACTTCAAGTTGTTAAGGGAAACGATGCAAAAGTTGGGAACCATCTTTCTAACACTTTGCATTCAAATAACTGTCTACTAATTCAACTATACGTATGGCATTTTGTGTCCCCTATCCAAAGGAGAAATGGAAGATGAGATAATACTTATTTCTGTCGATTGGGTGATTGCAGTAGCTATTGTAACTTTGATAGTGCATCTTGTGGAGTGAACTGTCCCGTTGAACAAAAGAAAACAAATGAAGCTTCTATCTGTCTAAAGTTGAAAATGGGTTGAGGTAATTGTGTAAAAAGATTGGGCTTGCTTGGTTTATTGTTGGACCGGGTTGGCTTAAGGAAAATAAATTAAGAGAGGTAAAGCTGGGTAAGGCTCTGTGGGTCATGGGCCCAAAATGAAGGGAGCTGATTACGAGTCGGTTTGTGTGGAGTTTGGGAAAAAAGACTCACCATGTGGGTTGGATTGAGGCTTCCAATGTCTTCATTCTCAACTTCTTTGTCTTTGCACACAACAACACAGTTTCATCATTTTTGCATGGGAACCCTTAAAATCCTTGGTTTGGGTTGCATGGATAATGGGTTGAAAAGAATCACCCAACTTTTATCTTTGAATGTGTCCTCATCCTCCTTGTTGCACATGATAACCCAAAAGGTTTTGTCAATTGATTCTTCTCCCTTCTTGACATCAACAACTTTGTTTAGCTATAGGTCCGATTCATCTTTGTCTTCGGTCGCATCACATTCTTTTTGTTCTTGCACATTTCTTTTCGGTGTCTTTCTTTTCTCTTCTCCTTCATCATGTGAATTTTTCAGAATCAATCTTTAGAACCTTTATTAGGAATCAAATTGTGAAGAATACATGAGAGAGCTCTCTATTTATAGGGAATTCGAGACCAAACTAAAAATTCAAAATTACCAAGGATATTAAAAGAGGATTAATCAAGAATTACCCTAATTAACCTTATTCTCCTACATCAATTCTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAGAGAACCTGGTCTCGAGTTTCATAAGGAAAAAATGAGGGTAGGTGGAAAGGAGTAAACAATCCTCCTCCAGAAATGGGATATTGTACTTCAGCCAATGGTTGCCAAAAACTCCAATTGATCTACCTTCAAATTTCAACAAGACGCCAAAAAAGAATACCACTTCAAGCCTAGGTGTTCTCAATTTCATAGAACAAATTAGATTGAGATTCTTGTTGCATTGTACTAATCTTCCAAAATTTCCAAATTCAACAATATTTTCTGCATTAGAAACCTGCCACTATTGACCCCAAGCAATACAACAATATTCTCCTCCACGTCAACTTCATGGTTCTATGGTTGTAGCTGGAGTGTTTCCAAATTGAATTTTTCTTCCACAATAGTAAAGAGTTTCCCATACATAATAAAATTTCATTATCGTCGTCAAATAATTTGAAAAATGCAAAAGAAATTCAATGAATACATCATTTGAAGTTATATGATTGATGTTCTCCTTCGCACAGATTTTCTTCAGTGCATAGGTTCTTTTGGTTTGTGATTTCGCTGGAGGTTCTGTACACATTTTTGGTTGTGATTTCTTGGACACTTTTTGTACCGTAGATGGGGAATAGTGTTCTTCAAATCCTTTGCTTCGGATTGGTATATTTTCAAATTCGTTCCAGTGCCTCAATCCATCACCATTCTACTGCTCATAAGCTATTTTCGTCCTTTTATTCTCCTTCCTGACTTTTCTCTCTTTTTTGTTGAATTTCTTGTGCTTCCTTTGAAAGCGTTGTTGTCGGCCATAATTTCCATCATACTTACAAAAGATGGTCATTAGTTACGGACTCTTTCTTGGTAGACGTCTGATTGTTAATCTGTCCCGAACTGCTATACAGTATTTGTTGGAATATTGGTAGAATCAAAACTTCAATGTGAATCTTGATAGTTTCTTTGATAAAATTGAGCATGAGCGACGCTATGACATTGAAATTCCTCTTTTGAATCACTTAAATCAGAATTCCAGCACCGTTTTGGAAGTATTTTTGACTTTCTTGCCTATACCAATGACTGTACTATTTCAAGAAAACAATTCTCTAGAGAATTGGAAAGACAACTAATCCTAATCTTAAATAATCATGGATTTGGCTAAGATACCCCAATTTACCATGATCCTACTACATCACAGGAGCTGGAAAGGTTATCTCATAAATTTGATGAAAATGTTTTGGATGCAACAAAGAAGTTCGAGAAGTTAATTGTTGATAAGCACGAAGTTGATGGATTGCCTTCTACTGCGCTAGGAATGGCAGCTCAAACAGCAGTTTCCAAGGTAATTCACTGTCAGTGATGTGCTTTGATTAAGTTATCTTTAAAATGGTTCAGAGTTTTACAGCATCAATTTGATGTTTGAGTCTTGCCAATTAATCTTTGATGTCTTTATTCTCATCAGGGTCACGAAAATGCTACTTCAGAAAATGGTCCATGGATAATTACGCTAGATGCTCCGTGTTATCTTTCTGTCATGCAACATGCTAAAAATCGATCCTTGCGGGAGGAAGTTTACTATGCTTATATAACCCGAGCCTCTAGTGGAGAAATGGACAATACATCAATAATTGACCAAACATTGAAATTCTAA ATGAAGATAAAGAGTTTGGCATTGCAAGCTCTTCTTATAGCCGGCTTGTTGATGGCGTCCCGATTTACACTCACCGCCTCCATCCAACCGTTTCTCATAAGAACGTACTTGCTCTCCGTTTCCTCTCCAAGCCGTTTACCAAAATCACTTCCCTGCCCCCTCTGGTCATCTTCCTTCTCCTTCTGCCTTCACAACCTTCACAACTCTGTTACCTCCTCTTCCATCCCTCACTTCTCTTCCTGTTCTTCGATTTCTGCTCCGTCAATGGCTGCTTCTGCCGCCCTGGATGAAATTCCGCAATCGAATCCTCTCCTCCAAAATTTTTATTTTCCGCCTTTCGATGCCGTGGAAGCTAAGCATGTTCGTCCAGGAATTCTTACGCTTTTGAAGACGCTCGAGGGTGATTTGGAGGAATTGGAGCGAACAGTGGAGCCATCTTGGTCAAAACTGGTTGAGCCATTAGAGAAGATTACGGACCGGTTGAATGTGGTTTGGGGTATTGTCAACCACCTCAAGTCTGTTAAGGATACTGCTGATCTTCGGATCGCTATCGAAGAAGTCCAGCCGGAGAAAGTAAAATTTCAGCTTAGGTTGGGGCAAAGCAAACCCATTTACAATGCTTTTAAAGCTATTCGTGAATCTCCCGAGTGGAACACACTCAATGATGCTCGGAAACGCATAGTGGAATCTCAAATAAAAGAGGCTCTTCTTCATGGTGTTACTCTTGAAGATGATAAAAGGGATAATTTCAACAAAATTCAGCAGGAGCTGGAAAGGTTATCTCATAAATTTGATGAAAATGTTTTGGATGCAACAAAGAAGTTCGAGAAGTTAATTGTTGATAAGCACGAAGTTGATGGATTGCCTTCTACTGCGCTAGGAATGGCAGCTCAAACAGCAGTTTCCAAGGGTCACGAAAATGCTACTTCAGAAAATGGTCCATGGATAATTACGCTAGATGCTCCGTGTTATCTTTCTGTCATGCAACATGCTAAAAATCGATCCTTGCGGGAGGAAGTTTACTATGCTTATATAACCCGAGCCTCTAGTGGAGAAATGGACAATACATCAATAATTGACCAAACATTGAAATTCTAA ATGAAGATAAAGAGTTTGGCATTGCAAGCTCTTCTTATAGCCGGCTTGTTGATGGCGTCCCGATTTACACTCACCGCCTCCATCCAACCGTTTCTCATAAGAACGTACTTGCTCTCCGTTTCCTCTCCAAGCCGTTTACCAAAATCACTTCCCTGCCCCCTCTGGTCATCTTCCTTCTCCTTCTGCCTTCACAACCTTCACAACTCTGTTACCTCCTCTTCCATCCCTCACTTCTCTTCCTGTTCTTCGATTTCTGCTCCGTCAATGGCTGCTTCTGCCGCCCTGGATGAAATTCCGCAATCGAATCCTCTCCTCCAAAATTTTTATTTTCCGCCTTTCGATGCCGTGGAAGCTAAGCATGTTCGTCCAGGAATTCTTACGCTTTTGAAGACGCTCGAGGGTGATTTGGAGGAATTGGAGCGAACAGTGGAGCCATCTTGGTCAAAACTGGTTGAGCCATTAGAGAAGATTACGGACCGGTTGAATGTGGTTTGGGGTATTGTCAACCACCTCAAGTCTGTTAAGGATACTGCTGATCTTCGGATCGCTATCGAAGAAGTCCAGCCGGAGAAAGTAAAATTTCAGCTTAGGTTGGGGCAAAGCAAACCCATTTACAATGCTTTTAAAGCTATTCGTGAATCTCCCGAGTGGAACACACTCAATGATGCTCGGAAACGCATAGTGGAATCTCAAATAAAAGAGGCTCTTCTTCATGGTGTTACTCTTGAAGATGATAAAAGGGATAATTTCAACAAAATTCAGCAGGAGCTGGAAAGGTTATCTCATAAATTTGATGAAAATGTTTTGGATGCAACAAAGAAGTTCGAGAAGTTAATTGTTGATAAGCACGAAGTTGATGGATTGCCTTCTACTGCGCTAGGAATGGCAGCTCAAACAGCAGTTTCCAAGGGTCACGAAAATGCTACTTCAGAAAATGGTCCATGGATAATTACGCTAGATGCTCCGTGTTATCTTTCTGTCATGCAACATGCTAAAAATCGATCCTTGCGGGAGGAAGTTTACTATGCTTATATAACCCGAGCCTCTAGTGGAGAAATGGACAATACATCAATAATTGACCAAACATTGAAATTCTAA MKIKSLALQALLIAGLLMASRFTLTASIQPFLIRTYLLSVSSPSRLPKSLPCPLWSSSFSFCLHNLHNSVTSSSIPHFSSCSSISAPSMAASAALDEIPQSNPLLQNFYFPPFDAVEAKHVRPGILTLLKTLEGDLEELERTVEPSWSKLVEPLEKITDRLNVVWGIVNHLKSVKDTADLRIAIEEVQPEKVKFQLRLGQSKPIYNAFKAIRESPEWNTLNDARKRIVESQIKEALLHGVTLEDDKRDNFNKIQQELERLSHKFDENVLDATKKFEKLIVDKHEVDGLPSTALGMAAQTAVSKGHENATSENGPWIITLDAPCYLSVMQHAKNRSLREEVYYAYITRASSGEMDNTSIIDQTLKF Homology
BLAST of Csor.00g283340.m01 vs. ExPASy Swiss-Prot
Match: Q94AM1 (Organellar oligopeptidase A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OOP PE=1 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-127 Identity = 231/328 (70.43%), Postives = 276/328 (84.15%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy Swiss-Prot
Match: Q949P2 (Probable cytosolic oligopeptidase A OS=Arabidopsis thaliana OX=3702 GN=CYOP PE=1 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.6e-117 Identity = 203/271 (74.91%), Postives = 241/271 (88.93%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy Swiss-Prot
Match: P44573 (Oligopeptidase A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=prlC PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-44 Identity = 97/268 (36.19%), Postives = 160/268 (59.70%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy Swiss-Prot
Match: P27237 (Oligopeptidase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=prlC PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.0e-42 Identity = 94/269 (34.94%), Postives = 157/269 (58.36%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy Swiss-Prot
Match: P27298 (Oligopeptidase A OS=Escherichia coli (strain K12) OX=83333 GN=prlC PE=3 SV=3) HSP 1 Score: 167.9 bits (424), Expect = 2.1e-40 Identity = 91/269 (33.83%), Postives = 155/269 (57.62%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. NCBI nr
Match: KAG6576606.1 (putative cytosolic oligopeptidase A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 706 bits (1823), Expect = 2.89e-256 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. NCBI nr
Match: XP_022922757.1 (probable cytosolic oligopeptidase A [Cucurbita moschata]) HSP 1 Score: 694 bits (1792), Expect = 6.93e-245 Identity = 360/364 (98.90%), Postives = 361/364 (99.18%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. NCBI nr
Match: XP_022984450.1 (probable cytosolic oligopeptidase A [Cucurbita maxima]) HSP 1 Score: 691 bits (1783), Expect = 1.61e-243 Identity = 357/364 (98.08%), Postives = 359/364 (98.63%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. NCBI nr
Match: XP_023552164.1 (probable cytosolic oligopeptidase A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 659 bits (1699), Expect = 8.71e-231 Identity = 341/364 (93.68%), Postives = 348/364 (95.60%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. NCBI nr
Match: XP_038895779.1 (LOW QUALITY PROTEIN: probable cytosolic oligopeptidase A [Benincasa hispida]) HSP 1 Score: 626 bits (1615), Expect = 4.61e-218 Identity = 325/364 (89.29%), Postives = 339/364 (93.13%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy TrEMBL
Match: A0A6J1E479 (probable cytosolic oligopeptidase A OS=Cucurbita moschata OX=3662 GN=LOC111430657 PE=3 SV=1) HSP 1 Score: 694 bits (1792), Expect = 3.35e-245 Identity = 360/364 (98.90%), Postives = 361/364 (99.18%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy TrEMBL
Match: A0A6J1J8N1 (probable cytosolic oligopeptidase A OS=Cucurbita maxima OX=3661 GN=LOC111482754 PE=3 SV=1) HSP 1 Score: 691 bits (1783), Expect = 7.77e-244 Identity = 357/364 (98.08%), Postives = 359/364 (98.63%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy TrEMBL
Match: A0A0A0L0F6 (Peptidase_M3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G090300 PE=3 SV=1) HSP 1 Score: 605 bits (1559), Expect = 1.32e-212 Identity = 316/367 (86.10%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy TrEMBL
Match: A0A1S3BS19 (probable cytosolic oligopeptidase A OS=Cucumis melo OX=3656 GN=LOC103492908 PE=3 SV=1) HSP 1 Score: 606 bits (1563), Expect = 1.83e-210 Identity = 315/367 (85.83%), Postives = 335/367 (91.28%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. ExPASy TrEMBL
Match: A0A6J1CHM9 (probable cytosolic oligopeptidase A OS=Momordica charantia OX=3673 GN=LOC111011725 PE=3 SV=1) HSP 1 Score: 602 bits (1553), Expect = 5.41e-209 Identity = 310/364 (85.16%), Postives = 330/364 (90.66%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. TAIR 10
Match: AT5G65620.1 (Zincin-like metalloproteases family protein ) HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-128 Identity = 231/328 (70.43%), Postives = 276/328 (84.15%), Query Frame = 0
BLAST of Csor.00g283340.m01 vs. TAIR 10
Match: AT5G10540.1 (Zincin-like metalloproteases family protein ) HSP 1 Score: 422.9 bits (1086), Expect = 2.6e-118 Identity = 203/271 (74.91%), Postives = 241/271 (88.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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