Csor.00g275620.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g275620.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRING-type domain-containing protein
LocationCsor_Chr15: 9876800 .. 9878351 (-)
Sequence length645
RNA-Seq ExpressionCsor.00g275620.m01
SyntenyCsor.00g275620.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGTTGCTGCTGCTGCTGTTCTTCGAAAGAAACAGAATCAAATATCGCACCAGGCTACTATTATGTCAGTATTGAATTTTTCATTGGATGTTTATTGTCATCTTCTTATCAATCAAATTCATTATCGTAAGCAAGGACAATGCAGCCATCATCTGGTATTCATTCGTTTCTTTATTATCATTGGCAGCATGTCTAGATGCATGTAGCTGTAGGTATTCCGTTATAACCTGTAAGTTAACGTAACTTGCATTATTTGAGGCACAAAACTGAACTGATTGTAGTGCGAGAGTGAATTCTTGAATGAAGCTTCTTTTTATAAGTAATTCTTTGCATTTAATGGTATAATTCAGCATCTTTGTGTTTTCCATATAAGTCTTCTTCCTTAGCATGAATCAAGTTAGATTGGCTGTGATTTAGGAGATGCTTGTGTATTACACTTGAATAAATAATGCAAGTTGCCGATTTAAATTTAAGTTATAAACGTGACATAGGCTACAATTTCTATTATTTGATCTCGTAAGTGGTTGAGATTTATCCTTAACTGCTAACTAACATGATGGGCTAGGGAATTTTCTTTCCATTGTCAATTTCCTTGCTCAAAATCTCAATTTACTTGAATCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAGTGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAATCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGCAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGGTGAAGTTTTGCCAAAACTTTGTTTAGCTACCTATACCAACCCACCAAACCATGGAATTTTTCTAACCTTATATGTCTATTGCCAACGTTCGACATTTTAGTTGCTTGAACTAACAAGTCACAACATCGTTGCTTTCTCGATAACCGCACAGTACCATTTCATTTTAATTACTTGGACTAACAAGTCACGTAGTCATCATTTTCTATTGTCTTATGCAGAATATGACGGAGAGAATCCAAAACTCACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATATGTCCTGTGTGCGATCAGGTCTGTTTCAGCAGTTTATGCTTTTTATCATCTGTCACCCCACTCATTTGCGTGTAACCCACCAAGATTACCTTTCTTTATGTCCTAATCATCTGCCTCTTACATACAGGAAATGGTTTTCAGCCCTCCAATTGATTAA

mRNA sequence

ATGGGAGGTTGCTGCTGCTGCTGTTCTTCGAAAGAAACAGAATCAAATATCGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAGTGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAATCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGCAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGACGGAGAGAATCCAAAACTCACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATATGTCCTGTGTGCGATCAGGAAATGGTTTTCAGCCCTCCAATTGATTAA

Coding sequence (CDS)

ATGGGAGGTTGCTGCTGCTGCTGTTCTTCGAAAGAAACAGAATCAAATATCGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAGTGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAATCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGCAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGACGGAGAGAATCCAAAACTCACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATATGTCCTGTGTGCGATCAGGAAATGGTTTTCAGCCCTCCAATTGATTAA

Protein sequence

MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Homology
[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39
Identity = 94/209 (44.98%), Postives = 127/209 (60.77%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGG  CC SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPD
Sbjct: 1   MGG--CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           T+   P P+PYD++L  P                  Q T+S++I+     ++ ET A CE
Sbjct: 61  TF-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTK
Sbjct: 121 DL-GESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVF 210
           CEH FHL+C+LEW+ERSD CP+CD+E+VF
Sbjct: 181 CEHEFHLSCLLEWIERSDRCPICDKEVVF 185

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 0 

Query: 55  DTSIPDTYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINT-- 114
           D  + + +RS P P+PYD    +  +    +E  S+ +    +   SD+  ++       
Sbjct: 70  DNFLSEAFRSTPRPLPYDADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGG 129

Query: 115 -RETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYD 174
            +  + K    D +S  +  +   +  L+     +    +++ +  E+EDVCP CLEEY 
Sbjct: 130 CKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYT 189

Query: 175 GENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFS 211
            ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F+
Sbjct: 190 SENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFN 228

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 69/210 (32.86%), Postives = 93/210 (44.29%), Query Frame = 0 

Query: 3   GCCCCCSSKETESNIAPGYYYYPRASEEHVPLS--SPLSAPPAFPMGLLVDTNLDTSIPD 62
           GCCCC  S    S          R  +EH+PLS  +P S   A+   L            
Sbjct: 2   GCCCCLPSIPESS----------RTIDEHLPLSRATPSSLSNAYSSPL------------ 61

Query: 63  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 122
              SPP+P+    +     +PP       N ++A+   T     ++T             
Sbjct: 62  ---SPPIPLAITNINLQT-SPPKLPRTQGNSSEASPGLTQVVPEKKT------------- 121

Query: 123 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 182
                        + VD L  ++ EL K  +  +      D CPICLEEY+ +NPKL TK
Sbjct: 122 -------------WHVDDL--TDFELKKQYREAI------DECPICLEEYEIDNPKLLTK 151

Query: 183 CEHHFHLACILEWMERSDICPVCDQEMVFS 211
           C H FHLACIL WMERS+ CPVCD+E+V +
Sbjct: 182 CGHDFHLACILAWMERSEACPVCDKELVLT 151

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 160 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSPP 213
           +D C ICLE +  ++P   T C+H +HL CI+EW +RS  CP+C Q  V   P
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDP 95

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0 

Query: 160 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSPP 213
           +D C ICLE +   +P   T C+H +HL CILEW +RS  CP+C Q +    P
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82

[Close]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match: KAG6579518.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446 bits (1147), Expect = 2.70e-158
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214

[Close]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match: XP_022929148.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata])

HSP 1 Score: 444 bits (1143), Expect = 1.10e-157
Identity = 213/214 (99.53%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGCCCCCSSKE+ESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGCCCCCSSKESESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214

[Close]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match: XP_023551494.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443 bits (1140), Expect = 3.16e-157
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GI DESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIGDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214

[Close]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match: XP_022970099.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima])

HSP 1 Score: 434 bits (1116), Expect = 1.39e-153
Identity = 210/214 (98.13%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSKETESNIAPGYYYYPRASEEHVPLSSPL+APPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPY+VVL+HPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 213

[Close]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match: XP_038876112.1 (probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876115.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida])

HSP 1 Score: 399 bits (1024), Expect = 1.43e-139
Identity = 198/214 (92.52%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSK TESNIAP YYYYPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKRTESNIAPSYYYYPRASEEHVPLSSPLSTPPAFSRGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLT P TPPVAQEI SNKNDAAAQTTN DTIQET CINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTSPLTPPVAQEIGSNKNDAAAQTTNPDTIQETACINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           G+D ESDCKKHTDFEVDTLKESEIELSKGV+S+VLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GVD-ESDCKKHTDFEVDTLKESEIELSKGVESMVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSSPID 212

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match: A0A6J1ER94 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC111435815 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 5.33e-158
Identity = 213/214 (99.53%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGCCCCCSSKE+ESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGCCCCCSSKESESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match: A0A6J1I4I7 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111469091 PE=4 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 6.74e-154
Identity = 210/214 (98.13%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSKETESNIAPGYYYYPRASEEHVPLSSPL+APPAFPMGLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPY+VVL+HPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 213

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match: A0A6J1DR88 (probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 5.45e-137
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSK TESNIAP YYYYPRAS+EHVPLSSP+ AP AF  GLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKGTESNIAPSYYYYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLTHPHTPPVAQEI SNKNDAAAQTTNSD +QE  C N RETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           GID ESDCKKHTDFE DTLKESEIELSKGV+SV L IEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GID-ESDCKKHTDFETDTLKESEIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEM+FSPPID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMLFSPPID 212

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match: A0A5A7TH60 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002410 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 4.29e-134
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSK TESNIAPGYYYYPRASEEHVPLSSPL  P AF  GLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLT P TPPVAQEI S KN+AAAQT NS+TIQET CINTRE SAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           G+D ESDCKKHTDFEV+TLKESEIELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GVD-ESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSSPID 212

[Close]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match: A0A1S3AU90 (E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC103482766 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 4.29e-134
Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGGC CCCSSK TESNIAPGYYYYPRASEEHVPLSSPL  P AF  GLLVDTNLDTSIPD
Sbjct: 1   MGGC-CCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYRSPPLPMPYDVVLT P TPPVAQEI S KN+AAAQT NS+TIQET CINTRE SAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           G+D ESDCKKHTDFEV+TLKESEIELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GVD-ESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214
           CEHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSSPID 212

[Close]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-52
Identity = 108/217 (49.77%), Postives = 143/217 (65.90%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLS-APPAFPMG-LLVDTNLDTSI 60
           MGGCCCC SS+  + +  P YYYYPRA+EE VPLSS  +    A   G ++VDTNL+TS 
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSS 60

Query: 61  PDTYRSPPLPMPYDVVLTHPHTPPVAQE-ICSNKNDAAAQTTNSDTIQETTCINTRETSA 120
           PD Y  PPLP P+DV +  P TP   +E  C +  + +  + N+++ QET    T     
Sbjct: 61  PDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVDGITLGVPT 120

Query: 121 KCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKL 180
            C     E+D K  T+ ++++ +E + +LS   K+V +PIEEE+ CPICLEEYD ENPKL
Sbjct: 121 TCS--HKETDSKIQTEIDLESTEEIDPKLS---KAVFIPIEEEEDCPICLEEYDIENPKL 180

Query: 181 TTKCEHHFHLACILEWMERSDICPVCDQEMVFSPPID 215
             KC+HHFHLACILEWMERS+ CPVC++EMVF   +D
Sbjct: 181 VAKCDHHFHLACILEWMERSETCPVCNKEMVFDSTLD 212

[Close]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 164.5 bits (415), Expect = 9.6e-41
Identity = 94/209 (44.98%), Postives = 127/209 (60.77%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGG  CC SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPD
Sbjct: 1   MGG--CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           T+   P P+PYD++L  P                  Q T+S++I+     ++ ET A CE
Sbjct: 61  TF-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTK
Sbjct: 121 DL-GESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVF 210
           CEH FHL+C+LEW+ERSD CP+CD+E+VF
Sbjct: 181 CEHEFHLSCLLEWIERSDRCPICDKEVVF 185

[Close]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A )

HSP 1 Score: 164.5 bits (415), Expect = 9.6e-41
Identity = 94/209 (44.98%), Postives = 127/209 (60.77%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGG  CC SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPD
Sbjct: 1   MGG--CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           T+   P P+PYD++L  P                  Q T+S++I+     ++ ET A CE
Sbjct: 61  TF-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTK
Sbjct: 121 DL-GESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVF 210
           CEH FHL+C+LEW+ERSD CP+CD+E+VF
Sbjct: 181 CEHEFHLSCLLEWIERSDRCPICDKEVVF 185

[Close]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A )

HSP 1 Score: 157.9 bits (398), Expect = 9.0e-39
Identity = 91/205 (44.39%), Postives = 123/205 (60.00%), Query Frame = 0 

Query: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60
           MGG  CC SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPD
Sbjct: 1   MGG--CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPD 60

Query: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           T+   P P+PYD++L  P                  Q T+S++I+     ++ ET A CE
Sbjct: 61  TF-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTK
Sbjct: 121 DL-GESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 206
           CEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 181 CEHEFHLSCLLEWIERSDRCPICDK 181

[Close]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-21
Identity = 61/162 (37.65%), Postives = 83/162 (51.23%), Query Frame = 0 

Query: 52  TNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPVAQEI-CSNKNDAAAQTTNSDTIQETTCI 111
           T LD S+   Y SPP P+PYD        P   + +  S+ +   ++    DT   +  +
Sbjct: 67  TALDDSLSSVYHSPPTPLPYDA------DPRYFRFVKGSSHSGEESEPLRGDTEMSSEAL 126

Query: 112 NTRETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSK---GVKSVVLPIEEEDVCPICL 171
              +  AK    D E   K     EV T   S    SK   G++      ++ED+CP CL
Sbjct: 127 G--DGGAKWSKSDSEDGSK-----EVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCL 186

Query: 172 EEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVF 210
           ++Y  ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F
Sbjct: 187 DDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215

The following BLAST results are available for this feature:
BLAST of Csor.00g275620.m01 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2HIJ81.4e-3944.98Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q8LE941.0e-1833.33E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022... [more]
Q93ZF61.1e-1732.86E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ... [more]
Q4TU141.1e-0945.28E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ... [more]
Q9ZT421.9e-0945.28E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ... [more]
BLAST of Csor.00g275620.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579518.12.70e-158100.00putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs... [more]
XP_022929148.11.10e-15799.53probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata][more]
XP_023551494.13.16e-15799.53probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo][more]
XP_022970099.11.39e-15398.13probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima][more]
XP_038876112.11.43e-13992.52probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 p... [more]
BLAST of Csor.00g275620.m01 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ER945.33e-15899.53probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1I4I76.74e-15498.13probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1DR885.45e-13789.72probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=... [more]
A0A5A7TH604.29e-13489.72E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A1S3AU904.29e-13489.72E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC1034827... [more]
BLAST of Csor.00g275620.m01 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41350.12.4e-5249.77RING/U-box superfamily protein [more]
AT4G00335.19.6e-4144.98RING-H2 finger B1A [more]
AT4G00335.29.6e-4144.98RING-H2 finger B1A [more]
AT4G00335.39.0e-3944.39RING-H2 finger B1A [more]
AT5G38895.15.0e-2137.65RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 163..203
e-value: 6.3E-8
score: 42.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 162..203
e-value: 1.3E-11
score: 44.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 163..204
score: 12.061441
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 134..209
e-value: 2.9E-16
score: 60.4
NoneNo IPR availablePANTHERPTHR46463ZINC FINGER, RING/FYVE/PHD-TYPEcoord: 1..214
NoneNo IPR availablePANTHERPTHR46463:SF37ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEINcoord: 1..214
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 157..210

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g275620Csor.00g275620gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.CDS04Csor.00g275620.m01.CDS04CDS
Csor.00g275620.m01.CDS03Csor.00g275620.m01.CDS03CDS
Csor.00g275620.m01.CDS02Csor.00g275620.m01.CDS02CDS
Csor.00g275620.m01.CDS01Csor.00g275620.m01.CDS01CDS


The following terminal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.terminal01Csor.00g275620.m01.terminal01terminal


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.stop_codon01Csor.00g275620.m01.stop_codon01stop_codon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.intron03Csor.00g275620.m01.intron03intron
Csor.00g275620.m01.intron02Csor.00g275620.m01.intron02intron
Csor.00g275620.m01.intron01Csor.00g275620.m01.intron01intron


The following internal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.internal02Csor.00g275620.m01.internal02internal
Csor.00g275620.m01.internal01Csor.00g275620.m01.internal01internal


The following initial feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.initial01Csor.00g275620.m01.initial01initial


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01.start_codon01Csor.00g275620.m01.start_codon01start_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g275620.m01Csor.00g275620.m01-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding