Csor.00g273750.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g273750.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin-conjugating enzyme
Location	Csor_Chr06: 8160178 .. 8164580 (-)
Sequence length	549
RNA-Seq Expression	Csor.00g273750.m01
Synteny	Csor.00g273750.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGTTAAGTCTCTTTTTCCTTTTCTGGGTTTATGAACTTGTTTCTTATTGACTGTTCTTGGATGGATTCTTCTGGGTTTTGACAGGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGAGTTTCATGGACCCAGTGAGAGTAAATCTTCAATACTCTGATCTAGAAGTTTCATTACATTTTTGTTTTGTTTGTTCGTGTTTGTGTTCGTGTTCATGTTCTTGTTCTTGTTCTTGATGAGTTTGGATCTCTGATGCATGGGGTTTTCTGTATTTGCTGAACTCTGGATTTGATTTGATCTATATGTAATAGAACGGTTAGCAGATATTGTTCTTTTTAGGCCTTCTTTTACGGCGTATGTTAGGGAGAGGTTTCTACACCCTTATAAGAAATGTTTTGTTCTATTCTCCAACCAGTTTGGGCTATTACAAATGGTATAGAGCTAGACACTAAGCGGTGTGTCAGTGAGGACGTTGGCGCCCAAGGAGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTACTTATAAGGGTGTGGAAACCTCTCATTAGTAGACGTGTTTTAAAACCTTGAGAGGAAGCTTGAAAGGGAAAACTCAAAGAGGACTATATCATCGGGTGGTGTGTCAATGAGGACGTTGGGTCCACAAGGGGGTGGATTGTGAGATCTCACATTGGTTGGAGAAGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCATTAGTGGACGTGTTTTAAAACCTCGAGAGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATATCATCGGGCGGTGTGCCAATGAGGACGCTGGGTTCACAACGGGGTGGACTGTGAGATCTCACATTGGTTGGAGAGGGAAATGAAGCAAGGGTGTGGAAACCTCTCATTAGTAGACGCGTTTTAAAACCTTGAGGGGAGCCTGAAAGGGAAAGCTCAAAGAGGACTATATCATCGGGTGTGTGCCAATGAGGACGCTGGGTCCACAAGGGGGTGGACTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCACTCCTTATAAGGGTGTGAAAATCTCTCATTAGTAGACGCGTTTTAAGACCTTGAGGGGAAACTCTAAAGGGAAAGCTCAAAGAATACTATATCATCGGGCGGTGTGCCAATGAGGACGCTGGATCCACAAGGGGGTGGACTGTGAGATCCCATATCAGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCCAGTAGATGCGTTTTAAAAACCTTGAGGTGAAGCCCGAAAGGGAAAGCTCAAAGAGGACTATATCATCGAACGGTGTGCCAATGAGGACGTTGGGTCTACAAGGGAGTGGATTGTGAGATCCTACATCTGTTGGAGAGGGGAACAAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATATGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGAAAAACCCAAAGAGGACAATATTTGCTAGCGATGGGCTTGGATTGTGGACCTGTCGAGTGTTTTATCATCGGTTCTCGAACATATGAAGTTATAGTTTAGTATTTGCCATCCTTTTTGTTCCTTTTTTTAGTTGCTTAAGCTGATGTTGATCTAAATAACGTGAGAATCTGTTCTTCTGAATGTTCATAGAGTAACAGGTTGTTTATCTGGTCATGTTGTGTATGGCTATACTCATTTGAGGGACCTAATTCTCCCATGTTCTTGGAGAACAGAAGGAAATGGATAAAGAAAAGTCATATTGTCATGGGTTGTCTGGCAGGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCGGACGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTGAGTTCATCATGTGTTCTTAGCTTAAAATGAAGTCGGTTTCAGGTCGTTTCATGTTTGGTCTTTGTTTTAGGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGGTAGGTGAACTTCTTGGTTTGTTGTTTATTTCCCGTCATCTCGTGTTTTTCGGATTAATCACGCATCTTTATATGCTATACTTTCAGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGGTATTGATTTTTTCGTTGTTTTTGTGCGTCGGAAACGAGCTTTACGAATGGTTTTTCTAATGCTTGCTGTCCATGTATAGCATTAATTTGATAGTTGTGTCGAACGTTTGGGATAGGATACTCTTTATCTTTGATGTTTGTTCCCTAGGCTCGTGATTTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACGTCTCCCTAGTAGACGTGTTTTAAAATCGTGAGGCTGATGGCGATATGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTATAAATGGTATTAGAGCTAGACACTGAACGGTGTGTTAGCAAGGACGCTGGTCCCCCAAGGGGGGTGGGGTAGATTGTGAGATCCCATATCGGTTGGAGAGAGGAACGAAGCATTCCTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGATGACGATACGTAACGGGCCAAAGTGGGCAATATCTGCTAGCGGTGGGCTTGGGCTGTTATAAATGGTATTAGAGCTAGACACTGAATGGTGTGTTAGCAAGGACGCTGGCCCCCAAGGGGGGTGGGGTGGATTGTGAGATCCCATATCGATTGGAGAGAGGAACGAAGCATTCCTTATATGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGGGCCAAAGTGGACAATATCTGCTAGCAGTGGACTTGGGATGTTATAAATGGTATTAGAGCTAGACACTGGACAGTGTGTCAGCGAGGACGTTGGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTAGAGAGGGGAACAGAGCATTCCTTATATGGGTGTGGAAACCTCTTCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGACAATACGTAACGGGCTAAAGTGGAGAATATCTACTAGCGGTGGACTTGGGCTGGTATAAATTATATTAGAGCTAGACACTGGACGGTGTGTTAACGAGGACACTGGGCCCCCAAGTGGGGTGGATTGAGATCCCACCTCGGTTGGAAAGGGGAACGAAACATTCCTTATATGGGTGTGGAAACCTCTTCCTAATAGATGCGTTTTAAAACCGTGAGGCTGACGGCGATACGTAACGGGCCAAAGTGGACAATATCTGCTAGCAGTGGACTTGGGATGTTATAAATGGTATTAGAGCTAGACACTGGACAGTGTGTCAGCGAGGACGTTGGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTAGAGAGGGGAACAGAGCATTCCTTATATGGGTGTGGAAACCTCTTCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGACAATACGTAACGGGCTAAAGTGGAGAATATCTACTAGCGGTGGACTTGGGCTGGTATAAATTATATTAGAGCTAGACACTGGACGGTGTGTTAACGAGGACACTGGGCCCCCAAGTGGGGTGGATTGAGATCCCACCTCGGTTGGAAAGGGGAACGAAACATTCCTTATATGGGTGTGGAAACCTCTTCTTAGTATACGCGTTTTAAAACTGTGAGGCTGATGACGATACGTAACGGGCTCAAGCGGACAATATTTGTTAGCAGTGGGCTTGAGCTGTTATAAATGGTATCAGAGGCAGACACCGGGCAGTTTGTCAGTGAGGACGTTGGAACCCGGGGGGTGGATTGTGAGATTTCACATTGGTTGGAGAGCGAAACGAAACCTTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGCATTTTAAAACCGTGAGGCTGATGACAATACGTAACGGGCCCAAATGATCTGTTAGCGGTGGGCTTGGGTTGTTAACATTAATAGCGGAGATAGCACATATGAGTTCTCATCATATCTTATCTTATTACAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAA

mRNA sequence

ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGAGTTTCATGGACCCAGTGAGAGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCGGACGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAA

Coding sequence (CDS)

ATGTCTTCTCCAAGCAAACGCCGAGAGATGGACTTGATGAAACTGATGATGAGCGATTACAAAGTGGAGATGATTAATGATGGGATGCAAGAGTTTTATGTAGAGTTTCATGGACCCAGTGAGAGTCCTTATCATGGAGGTGTATGGAGGATACGAGTCGAACTCCCGGACGCTTACCCGTATAAATCGCCTTCGATAGGATTCGTTAACAAAATTTACCACCCCAATGTTGATGAGATGTCGGGTTCGGTTTGTTTGGACGTTATCAATCAAACTTGGAGTCCCATGTTCGATCTTGTAAATGTTTTTGAAGTGTTCCTACCACAACTTCTTTTGTATCCCAATCCATCAGATCCTTTGAATGGAGAGGCTGCAGCCTTGATGATGCGTGACCGTGTTGCTTATGATCAAAGAGTAAAAGAATACCGTGAAAGATACGCCAAGGCAGAAGACATAGTAGCTGCACCCGACCAATCAAGCGACGAGGAACTAAGTGAAAATGAATCCGAGTCGAGCGAGGAGGAAGTTGCAGGGAAAGCGGACCTCTAA

Protein sequence

MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKADL

Homology

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BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-76
Identity = 147/188 (78.19%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVE INDGMQEFYVEF+GP +S Y GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEE----- 180
           NGEAAALMMRDR AY+QRVKEY E+YAK  +   + D+SSDEELSE E  S  E+     
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGE--GSEDKSSDEELSEEEYGSDNEDDDDDD 180

Query: 181 --VAGKAD 182
             +AGK D
Sbjct: 181 VAIAGKPD 186

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 2.2e-75
Identity = 145/186 (77.96%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+VEF GP +S Y GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENE--SESSEEE--- 180
           NGEAAALMMRDR  Y+QRVKEY E+YAK        + SSD+E+SE+E  S+  +E+   
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR--ADTEEMSSDDEMSEDEYASDGDDEDDVA 180

Query: 181 VAGKAD 182
           +AGK D
Sbjct: 181 IAGKLD 184

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-75
Identity = 142/183 (77.60%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKV+MINDGM EF+V FHGP +S Y GGVW++RVEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVN+FEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDI-VAAPDQSSDEELSENES-ESSEEEVAG 180
           NGEAA+LMMRD+ AY+ +VKEY ERYAK EDI     ++ SDEELS+ E  +S +E + G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180

Query: 181 KAD 182
            AD
Sbjct: 181 HAD 183

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-71
Identity = 131/184 (71.20%), Postives = 159/184 (86.41%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV FHGP++S Y GGVW+I+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESES---SEEEVA 180
           NGEAA+L+MRDR AY+ +VKEY E+YAK E+I++  D   D+ +SE+ S+S    ++E+ 
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILS--DDDDDDSMSEDGSDSDDDDDDEIV 180

Query: 181 GKAD 182
           GKAD
Sbjct: 181 GKAD 182

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.3e-63
Identity = 114/181 (62.98%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSP +R E D+MKL+MSDY+V ++ND MQEFYV FHGPSE+PY GG+W++ VELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           +KSPSIGFVN+I+HPN+DE+SGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAAL++R+   Y  +V++Y  RYA  ED     + SSD++   +    S +E+AG  
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSIDTESGDEIAGPM 180

Query: 181 D 182
           D
Sbjct: 181 D 181

[Close]

BLAST of Csor.00g273750.m01 vs. NCBI nr
Match: XP_022935452.1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita moschata] >KAG6597133.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362 bits (930), Expect = 2.87e-126
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g273750.m01 vs. NCBI nr
Match: XP_023541016.1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361 bits (927), Expect = 8.24e-126
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESS+EEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSDEEVAGKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g273750.m01 vs. NCBI nr
Match: XP_022974572.1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 358 bits (920), Expect = 9.63e-125
Identity = 179/182 (98.35%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAYDQRVKEYRERYAKAE+IVAAPDQSSDEELSENESESS+EEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEEIVAAPDQSSDEELSENESESSDEEVAGKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g273750.m01 vs. NCBI nr
Match: XP_022147338.1 (ubiquitin-conjugating enzyme E2 4 isoform X1 [Momordica charantia])

HSP 1 Score: 342 bits (877), Expect = 3.47e-118
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEM+NDGM EFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMHEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAY+QRVKEY ERYAK EDI+AAPD+SSDEELSE+ES+S +EEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYEQRVKEYCERYAKPEDIIAAPDKSSDEELSEDESDSCDEEVAGKA 180

[Close]

BLAST of Csor.00g273750.m01 vs. NCBI nr
Match: KAG2725299.1 (hypothetical protein I3760_01G059000 [Carya illinoinensis] >KAG7994480.1 hypothetical protein I3843_01G059200 [Carya illinoinensis])

HSP 1 Score: 338 bits (866), Expect = 1.71e-116
Identity = 169/182 (92.86%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMM DYKVEMINDGMQEFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMGDYKVEMINDGMQEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQ-SSDEELSENESESSEEEVAGK 180
           NGEAAALMMRDR AYDQRVKEYRE+YAK EDI AAP++ SSDEELSE+ES+SS+E+VAGK
Sbjct: 121 NGEAAALMMRDRAAYDQRVKEYREKYAKPEDIGAAPEENSSDEELSEDESDSSDEQVAGK 180

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL
Match: A0A6J1F5L1 (ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442319 PE=3 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.39e-126
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL
Match: A0A6J1IAM3 (ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473269 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 4.66e-125
Identity = 179/182 (98.35%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAYDQRVKEYRERYAKAE+IVAAPDQSSDEELSENESESS+EEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEEIVAAPDQSSDEELSENESESSDEEVAGKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL
Match: A0A6J1D120 (ubiquitin-conjugating enzyme E2 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016307 PE=3 SV=1)

HSP 1 Score: 342 bits (877), Expect = 1.68e-118
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEM+NDGM EFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMHEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEEVAGKA 180
           NGEAAALMMRDRVAY+QRVKEY ERYAK EDI+AAPD+SSDEELSE+ES+S +EEVAGKA
Sbjct: 121 NGEAAALMMRDRVAYEQRVKEYCERYAKPEDIIAAPDKSSDEELSEDESDSCDEEVAGKA 180

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL
Match: A0A6P9EI87 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Juglans regia OX=51240 GN=LOC109021526 PE=3 SV=1)

HSP 1 Score: 336 bits (862), Expect = 3.37e-116
Identity = 168/182 (92.31%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMM DYKVEMINDGMQEFYV+FHGPSESPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMGDYKVEMINDGMQEFYVDFHGPSESPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQ-SSDEELSENESESSEEEVAGK 180
           NGEAAALMMRDR AY+QRVKEYRE+YAK EDI AAP++ SSDEELSE+ES+SS+E+VAGK
Sbjct: 121 NGEAAALMMRDRAAYEQRVKEYREKYAKPEDIGAAPEEKSSDEELSEDESDSSDEQVAGK 180

[Close]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL
Match: A0A1S3AW08 (ubiquitin-conjugating enzyme E2-23 kDa isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483264 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 3.93e-115
Identity = 167/183 (91.26%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDG+QEFYV+FHGPSESPYHGG+WRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGVQEFYVDFHGPSESPYHGGLWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEE-LSENESESSEEEVAGK 180
           NGEAAALMMRDRVAY+Q+VKEY ERYAK EDIVAAPD+SSDEE LSE+ES+ S+E+V G+
Sbjct: 121 NGEAAALMMRDRVAYEQKVKEYCERYAKPEDIVAAPDKSSDEEELSEDESDLSDEQVMGQ 180

Query: 181 ADL 182
           ADL
Sbjct: 181 ADL 183

[Close]

BLAST of Csor.00g273750.m01 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 147/188 (78.19%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVE INDGMQEFYVEF+GP +S Y GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESESSEEE----- 180
           NGEAAALMMRDR AY+QRVKEY E+YAK  +   + D+SSDEELSE E  S  E+     
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGE--GSEDKSSDEELSEEEYGSDNEDDDDDD 180

Query: 181 --VAGKAD 182
             +AGK D
Sbjct: 181 VAIAGKPD 186

[Close]

BLAST of Csor.00g273750.m01 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 283.1 bits (723), Expect = 1.6e-76
Identity = 145/186 (77.96%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+VEF GP +S Y GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENE--SESSEEE--- 180
           NGEAAALMMRDR  Y+QRVKEY E+YAK        + SSD+E+SE+E  S+  +E+   
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR--ADTEEMSSDDEMSEDEYASDGDDEDDVA 180

Query: 181 VAGKAD 182
           +AGK D
Sbjct: 181 IAGKLD 184

[Close]

BLAST of Csor.00g273750.m01 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 270.8 bits (691), Expect = 8.1e-73
Identity = 131/184 (71.20%), Postives = 159/184 (86.41%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV FHGP++S Y GGVW+I+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAALMMRDRVAYDQRVKEYRERYAKAEDIVAAPDQSSDEELSENESES---SEEEVA 180
           NGEAA+L+MRDR AY+ +VKEY E+YAK E+I++  D   D+ +SE+ S+S    ++E+ 
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILS--DDDDDDSMSEDGSDSDDDDDDEIV 180

Query: 181 GKAD 182
           GKAD
Sbjct: 181 GKAD 182

[Close]

BLAST of Csor.00g273750.m01 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 11  DLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70
           DL K   S+     + + M  +     GP ESPY GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMR 130
           K+YHPN++  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRVAYDQRVKEYRERYA 148
           DR  Y+   + + ++YA
Sbjct: 132 DRSKYESTARSWTQKYA 146

[Close]

BLAST of Csor.00g273750.m01 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 11  DLMKLMMSDYKVEMINDGMQEFYVEFHGPSESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70
           DL K   S+     + + M  +     GP ESPY GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMR 130
           K+YHPN++  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRVAYDQRVKEYRERYA 148
           DR  Y+   + + ++YA
Sbjct: 132 DRSKYESTARSWTQKYA 146

The following BLAST results are available for this feature:

BLAST of Csor.00g273750.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42748	1.5e-76	78.19	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S...	[more]
P42749	2.2e-75	77.96	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S...	[more]
P16577	2.9e-75	77.60	Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1...	[more]
P42750	1.1e-71	71.20	Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S...	[more]
Q9P7R4	3.3e-63	62.98	Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Csor.00g273750.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935452.1	2.87e-126	100.00	ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita moschata] >KAG65971...	[more]
XP_023541016.1	8.24e-126	99.45	ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022974572.1	9.63e-125	98.35	ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucurbita maxima]	[more]
XP_022147338.1	3.47e-118	92.82	ubiquitin-conjugating enzyme E2 4 isoform X1 [Momordica charantia]	[more]
KAG2725299.1	1.71e-116	92.86	hypothetical protein I3760_01G059000 [Carya illinoinensis] >KAG7994480.1 hypothe...	[more]

BLAST of Csor.00g273750.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5L1	1.39e-126	100.00	ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IAM3	4.66e-125	98.35	ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1D120	1.68e-118	92.82	ubiquitin-conjugating enzyme E2 4 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6P9EI87	3.37e-116	92.31	ubiquitin-conjugating enzyme E2-23 kDa-like OS=Juglans regia OX=51240 GN=LOC1090...	[more]
A0A1S3AW08	3.93e-115	91.26	ubiquitin-conjugating enzyme E2-23 kDa isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Csor.00g273750.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41340.1	1.1e-77	78.19	ubiquitin conjugating enzyme 4	[more]
AT1G63800.1	1.6e-76	77.96	ubiquitin-conjugating enzyme 5	[more]
AT2G46030.1	8.1e-73	71.20	ubiquitin-conjugating enzyme 6	[more]
AT3G08690.1	1.1e-21	35.77	ubiquitin-conjugating enzyme 11	[more]
AT3G08690.2	1.1e-21	35.77	ubiquitin-conjugating enzyme 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..148 e-value: 1.5E-50 score: 183.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..182
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..181
None	No IPR available	PANTHER	PTHR24068:SF294	UBIQUITIN-CONJUGATING ENZYME E2-21 KDA 1	coord: 3..181
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..159 e-value: 2.1E-49 score: 169.1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 4..148
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 10..142 e-value: 1.3E-38 score: 131.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..148 score: 41.844105
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..142 e-value: 3.9932E-52 score: 161.601
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 73..89

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g273750	Csor.00g273750	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.CDS01	Csor.00g273750.m01.CDS01	CDS
Csor.00g273750.m01.CDS02	Csor.00g273750.m01.CDS02	CDS
Csor.00g273750.m01.CDS03	Csor.00g273750.m01.CDS03	CDS
Csor.00g273750.m01.CDS04	Csor.00g273750.m01.CDS04	CDS
Csor.00g273750.m01.CDS05	Csor.00g273750.m01.CDS05	CDS
Csor.00g273750.m01.CDS06	Csor.00g273750.m01.CDS06	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.stop_codon01	Csor.00g273750.m01.stop_codon01	stop_codon

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.terminal01	Csor.00g273750.m01.terminal01	terminal

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.intron01	Csor.00g273750.m01.intron01	intron
Csor.00g273750.m01.intron02	Csor.00g273750.m01.intron02	intron
Csor.00g273750.m01.intron03	Csor.00g273750.m01.intron03	intron
Csor.00g273750.m01.intron04	Csor.00g273750.m01.intron04	intron
Csor.00g273750.m01.intron05	Csor.00g273750.m01.intron05	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.internal01	Csor.00g273750.m01.internal01	internal
Csor.00g273750.m01.internal02	Csor.00g273750.m01.internal02	internal
Csor.00g273750.m01.internal03	Csor.00g273750.m01.internal03	internal
Csor.00g273750.m01.internal04	Csor.00g273750.m01.internal04	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.initial01	Csor.00g273750.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01.start_codon01	Csor.00g273750.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g273750.m01	Csor.00g273750.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity