Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGGTATGCATCTCTTCTTATTTATTTTCAGCGTTATATTTTGTCTGAGTCGCAAGAATTCATGGAAAACAATGCGCAAGGAAGTTTAGATTGCAATGATGTTCGTAATCAGTAGCCTGACAGTTTTTGTTTCTTTATTTCCCGTGCTTCTAGCCGTTTATCGTGATCCGAATTCTGAAATATATAGATTTCATTTTGATCCTACCTATGTTCTTGATGTTTCATAAGGAATTTATTATGTCGGAGCTTTTAAGAGATTTACATTTTCAATACATTTTACTGCAGACATCGAAATTTTTACTTACGCAGCTTAGTTCGGTTTGTTCATTGATTGAATTGACTTCATATTTGTTGATACAAGGTTAAGTTACTTTAGGTTTTGATTAAGAATAATCAGATGACTAAGAATTTGGAGTATTCGGAGTATAATCTTGTCGTGCAAACTCGATCCAATCTCTTCAGTTTTACGTCATTATTTTCGAATCTGTTCCAGAGGAAACGCAAAATATTCAAGGAAAACATGAAGTTTCTTTTAATGTAATATAAAATGAAAATATTAATGGTTTTGATGGTTTTTAGCAGGTCAAATGCGTTAACCACCGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCACTGTTTCTTCTCGGATATTCAGGTTTTAAGACTTTGTTTCTCCCTCAAGAAATGAAGGAAATGATACTAAAAAAAAAAAAAAAAAAAAAAAAAGAAAACATCTGATCATGCATATTTCATCGTGATCATTATCTTTGAAAAAAAAAAAAAAAGTTTTCCCCTTATCACTCCTTCAATTTTGCTTTGTGGAGAATATAGTCATATGCATGAAGGTATTTGTATTATCTCCGTTGCCATGATGAAATTCCATCTTCACTTGTTGTTCCAGCTTCAAGTCACCAGGTATTACAATTGCAAATAGGAGCCTTATGGGACTATGTTCCATTTCAGGAGATGACCTTGTCTACTCCTTCCCTTTCTAAAAACCTTTTTACTACCAGTCTAGCCTTTTATGTGATTGCAGAGCCAAGAGGAATTGTCTATTATGAAGGAAAAAAGAATTGTTCAACCCAGAAAGAAACCTCCCCTTTGGAAACATCATAGCAACGATAACTTCGCATACCCTACTTACCTTGAAAAGACCACATAACTACACCTGATTTTTTATCAGTCATCACAGAAACAAAAAGTCGGCTGACATGAGGAACTCAGTGAGCTGGCAGGTTTTCGGTTATTCAGTTACACCTAAGCTTATGTTTATTTTACAATTTTATACTAACTAGCTTGCTACAATCAGTTGCATAATAGGACTACTAAAAAAACTCATCATATCCACGTCATATCTTGAATTTGGCAGGTCAAATACCTCAAAATGTACCTCTCTCTATATATTATTTTGTTATAGATATAAGAGCGCCATGATGAATGCTCTGAGTCTCTCATGCCATGAGGATCTGACTACGACATCATATCAACTTGAAATAAAGTTTTATGATTGTAGTGGTGTTCTTTTTGTTTTCATCTCTTATGACTTAACTTTGACGTACCATTCTGTTTGGCAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTTCCGGACTCTAAGTGTAAGTTCACTCTCTTGGACTCGGCAGGCAGGTTGATCAGCTATCATTTCCTTCAACCTTTATAATAATCGTCCCTTAATTTGTGATAATTTTAGCTTTCCTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATTGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCATGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGGTGAGCTTTGTAATCTTTCAAGCTGAAAAGTAAAATCCGAAGAGAAACTATGTACTAGTATTACTAGCTTGGAAAACACTTCCTGCATTGAAACCTGATGTGTTTGATTCTCAAGTAGGAATAAGGTGATGAATATGCTTTACTTGAATTTCAATTCCTTAATAGAGTAGGATTAAACTTTCTATGTTAAGAATGTGAGAAGGGAAAGTGCCCGAATCAATAAGTATTTCTGACCTCAAAGTCATCGCTTTAAGGCCAAAAGCTTTGTCAAGCAATATGCTTATTTTTTTAAAATAATTGCAGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGGTAAATAGATCAATGCAATATTATATTGAGCATTAAGTTTGTTTAATTTTAATCACAATGTCTAAATTTTCCATTCAACTAATGAGTACAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAATCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTAAAGAAGGATGCATACCAAGAAAGGCTACACGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAACTAAGAAATGATTTCATCAGCACGTTCACCCAAGAAATGAAAGTAAGTGCATGTCGTATCAAGTACTGCTATAAATGCACGATAAAAAGGATTCTCCCCGTAACTCTATTTCGATGAGATGAGGTGTTTATAAATTATGTATACATTCTTAAAAGTACCCCGCCTAAATTTTTGTTCTTAGATTGTTTTAACATTTCAACAAATGCCACTTTGCAGTCACGTAACTTATTGGTTGTTCTTCAAAAACTTGTAGGCAATGGTCTGTACCCTGAAAAAACCCTTGCAGAAATTTCCACATCGCCCTATTGAATCTCCCGAGGTTCAGTTTCTTATTAGATATCGGTCAAATATTTTAAGCATTTGTCTCATTCTGAACTGTTCCTCATGAAAGTCTTTAATTGCAAATGTCAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATGTAATGAACGTCAGTTTTCTTAATAATTGCCTTGATTCCTAGTATTTTCATGCATTCCATATTCAGACAGTAATTCATTCAACAGTTATCATTCTTGAATGAATTACTGATAATGGCCAATGGGTTAAAAGATTGAATTGATGTATACTAATCTGGGAGTTGATCTTGTCCTTCTAATGCACAAAAATAGAATTTCATGCAGTCCGACATTTAGTGACCTGTAAAAGCTCAATGGTTTCTTTCATTCCTGTATATTTTATGGTTCTGATGTACTGCAGTCTGGAAGTTCTCAAAGGAATTACTATGTTATATTTGATTAAATTCTATCATTTGGCTTGTGGATATGCGGGAAAAGAGAAGTTTTCACATTTTTCAGTAATGTTATCTTAATGTGGCATGAAAAACCACGGCAGCCACAATATGTTCTGGTGACCATGATTGCTAATGAATTACGGAATTATATGCATAGATCCTTTGTTCTTTAGCATCTTAAGTGATCTTACCTTTTCCACTTGATAACAGCCAATCTGCGTCTCCAGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACATTTTGCACTAGTACTGTGGCGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGGTAATGGTTCGAGTTTCATTATTTTTTCTGCCATCTCATTACATATATTACGGAAATTGCATGATTGTACTTTTTAAAGCAAATATTAACTTATTCCCTGATTATTGAATCCGAAATTTAAACTTATTATTCATTGAAGCGGGTAAAGATTTCTCCTTGAATATTAACAGCGCCTGGTGGTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
mRNA sequence
ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGGTCAAATGCGTTAACCACCGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATTGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCATGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGAGCACGATGACATGAAATCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTAAAGAAGGATGCATACCAAGAAAGGCTACACGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAACTAAGAAATGATTTCATCAGCACGTTCACCCAAGAAATGAAAGCAATGGTCTGTACCCTGAAAAAACCCTTGCAGAAATTTCCACATCGCCCTATTGAATCTCCCGAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATCCAATCTGCGTCTCCAGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACATTTTGCACTAGTACTGTGGCGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGCGCCTGGTGGTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
Coding sequence (CDS)
ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGGTCAAATGCGTTAACCACCGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACACAAAGATGGAAATCAACTCCACTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATTGAAAACTCATTGAACAAATTTGGAAAGATCCTGGATTCTCTTCATGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAATCCATGAACAAAGAGCACGATGACATGAAATCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTAAAGAAGGATGCATACCAAGAAAGGCTACACGAGATTTCTGATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAACTAAGAAATGATTTCATCAGCACGTTCACCCAAGAAATGAAAGCAATGGTCTGTACCCTGAAAAAACCCTTGCAGAAATTTCCACATCGCCCTATTGAATCTCCCGAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATCCAATCTGCGTCTCCAGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACATTTTGCACTAGTACTGTGGCGAAAAAGGAAGATGCAAAGAAAGCAATTCCATTTTCTGAACAGCGCCTGGTGGTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
Protein sequence
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGDSWK
Homology
BLAST of Csor.00g273690.m01 vs. ExPASy Swiss-Prot
Match:
Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)
HSP 1 Score: 219.2 bits (557), Expect = 8.1e-56
Identity = 155/432 (35.88%), Postives = 244/432 (56.48%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQ 60
M++ INKACDL SISV PP R +A Q + QLRSQ SQQSFSQG SS G SQ
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRSA--EPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQ 60
Query: 61 FSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREECQLPLSKSSTSLTQRWKST 120
+Q+S DE++ N+QRFSSQ+R+ S+KK +S PP+++ RE+ QL S+SS+ L++RW S
Sbjct: 61 MTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSA 120
Query: 121 PLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVI 180
+ +SK Q+ EEL++R G +E SL++FG +LDS+ DI+ N+G K++ L+ E I QK+
Sbjct: 121 SIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLT 180
Query: 181 VNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLK 240
+ + LQ + KE D K++LDGG K I ++ KD QE+L +I +L+ + +QV+ + K
Sbjct: 181 LQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQK 240
Query: 241 LRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA---- 300
++ + TFT+E++ ++ +L+ P + R +P+ A ++P+Q+ + K+ ++
Sbjct: 241 IQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSLKMP 300
Query: 301 SPDVCIRA-----------------------TAVQTE----------------------- 360
P V + A T ++T+
Sbjct: 301 EPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLSPK 360
Query: 361 -EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEE-IERSFSC 377
+VG WK+VK K + KK +K + R E + V++DSDEE I+ FSC
Sbjct: 361 IQVGCWKTVKPEK-----SNFKKRATRKPVKSESTRTQFE-QCSVVIDSDEEDIDGGFSC 420
BLAST of Csor.00g273690.m01 vs. ExPASy Swiss-Prot
Match:
Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 1.4e-28
Identity = 106/287 (36.93%), Postives = 159/287 (55.40%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQ---SRSNALTTGQQAPQLRSQP-------SQQSFSQGLS- 60
M+LK+NKACD++SISVLPP+ S A +G A + SQP SQQSFSQG S
Sbjct: 1 MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60
Query: 61 SLHGTNSQFSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFPPLSYS--REECQL 120
SL + SQFSQ S D+ + T +QRF D +S K+ S P S S REE QL
Sbjct: 61 SLLHSQSQFSQVSLDDNLLTLLPSPTRDQRFGLHD--DSSKRMSSLPASSASCAREESQL 120
Query: 121 PLSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQ 180
L+K ++ RW + QV E+++R+ + +S++K G ++DS+ D++ LN+
Sbjct: 121 QLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLNR 180
Query: 181 GMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLK-KDAYQERLHE 240
MK+ SLD I QK+ V S LQ + K DD+K+ K DQ ++ +L+E
Sbjct: 181 AMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLNE 240
Query: 241 ISDVLSALEKQVQASQLKLRNDFI----STFTQEMKAMVCTLKKPLQ 262
IS L+ L+ Q+QA QL+ + ++ + E+ + + TL+ +Q
Sbjct: 241 ISSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISSTLATLQTQMQ 285
BLAST of Csor.00g273690.m01 vs. NCBI nr
Match:
KAG6597127.1 (putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 723 bits (1867), Expect = 1.34e-262
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD
Sbjct: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
Query: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS
Sbjct: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
Query: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND
Sbjct: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
Query: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Sbjct: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
Query: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER
Sbjct: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
Query: 361 SFSCLIEEKKTGDSWK 376
SFSCLIEEKKTGDSWK
Sbjct: 361 SFSCLIEEKKTGDSWK 376
BLAST of Csor.00g273690.m01 vs. NCBI nr
Match:
XP_022943732.1 (protein PAIR1 isoform X2 [Cucurbita moschata])
HSP 1 Score: 714 bits (1843), Expect = 2.02e-258
Identity = 372/373 (99.73%), Postives = 373/373 (100.00%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD
Sbjct: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
Query: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS
Sbjct: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
Query: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND
Sbjct: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
Query: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Sbjct: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
Query: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER
Sbjct: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
Query: 361 SFSCLIEEKKTGD 373
SFSCLIEEKKTG+
Sbjct: 361 SFSCLIEEKKTGE 373
BLAST of Csor.00g273690.m01 vs. NCBI nr
Match:
XP_022943725.1 (protein PAIR1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 709 bits (1831), Expect = 1.41e-256
Identity = 372/374 (99.47%), Postives = 373/374 (99.73%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP
Sbjct: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
Query: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN
Sbjct: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
Query: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Sbjct: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
Query: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE
Sbjct: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
Query: 361 RSFSCLIEEKKTGD 373
RSFSCLIEEKKTG+
Sbjct: 361 RSFSCLIEEKKTGE 374
BLAST of Csor.00g273690.m01 vs. NCBI nr
Match:
XP_023539314.1 (protein PAIR1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 708 bits (1827), Expect = 5.54e-256
Identity = 368/373 (98.66%), Postives = 371/373 (99.46%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD
Sbjct: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
Query: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
SKCQ+GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS
Sbjct: 121 SKCQLGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
Query: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
LLQSMNKEHDDMK+TLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND
Sbjct: 181 LLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
Query: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Sbjct: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
Query: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
TAVQTEEVGRWKSVKVGK FCTSTV KKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER
Sbjct: 301 TAVQTEEVGRWKSVKVGKAFCTSTVMKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
Query: 361 SFSCLIEEKKTGD 373
SFSCLIEEKKTG+
Sbjct: 361 SFSCLIEEKKTGE 373
BLAST of Csor.00g273690.m01 vs. NCBI nr
Match:
KAG7028594.1 (Protein PAIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 700 bits (1806), Expect = 1.02e-252
Identity = 372/397 (93.70%), Postives = 372/397 (93.70%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQ-------------------------RFSSQDRENSIKKNSFFPPLSYSR 120
NSFDEVVTNEQ RFSSQDRENSIKKNSFFPPLSYSR
Sbjct: 61 NSFDEVVTNEQLQVTSGVLFVFISYDLTLTYHSVWQRFSSQDRENSIKKNSFFPPLSYSR 120
Query: 121 EECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDIL 180
EECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDIL
Sbjct: 121 EECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDIL 180
Query: 181 HLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQER 240
HLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQER
Sbjct: 181 HLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQER 240
Query: 241 LHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTA 300
LHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTA
Sbjct: 241 LHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTA 300
Query: 301 SLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAI 360
SLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAI
Sbjct: 301 SLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAI 360
Query: 361 PFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTG 372
PFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 PFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTG 397
BLAST of Csor.00g273690.m01 vs. ExPASy TrEMBL
Match:
A0A6J1FTV4 (protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 714 bits (1843), Expect = 9.79e-259
Identity = 372/373 (99.73%), Postives = 373/373 (100.00%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD
Sbjct: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
Query: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS
Sbjct: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
Query: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND
Sbjct: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
Query: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Sbjct: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
Query: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER
Sbjct: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
Query: 361 SFSCLIEEKKTGD 373
SFSCLIEEKKTG+
Sbjct: 361 SFSCLIEEKKTGE 373
BLAST of Csor.00g273690.m01 vs. ExPASy TrEMBL
Match:
A0A6J1FY69 (protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 709 bits (1831), Expect = 6.85e-257
Identity = 372/374 (99.47%), Postives = 373/374 (99.73%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP
Sbjct: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS
Sbjct: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
Query: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN
Sbjct: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
Query: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Sbjct: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
Query: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE
Sbjct: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
Query: 361 RSFSCLIEEKKTGD 373
RSFSCLIEEKKTG+
Sbjct: 361 RSFSCLIEEKKTGE 374
BLAST of Csor.00g273690.m01 vs. ExPASy TrEMBL
Match:
A0A6J1IAP9 (protein PAIR1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 SV=1)
HSP 1 Score: 698 bits (1802), Expect = 1.73e-252
Identity = 363/373 (97.32%), Postives = 369/373 (98.93%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQ 60
Query: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD
Sbjct: 61 NSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPD 120
Query: 121 SKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS
Sbjct: 121 YKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSS 180
Query: 181 LLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRND 240
LLQSMNKEHDDMK+TLDGGFKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+ND
Sbjct: 181 LLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQLKLKND 240
Query: 241 FISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
FIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Sbjct: 241 FISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA 300
Query: 301 TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIER 360
TAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIER
Sbjct: 301 TAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEEIER 360
Query: 361 SFSCLIEEKKTGD 373
SFSCLIEEKKTG+
Sbjct: 361 SFSCLIEEKKTGE 373
BLAST of Csor.00g273690.m01 vs. ExPASy TrEMBL
Match:
A0A6J1IBT5 (protein PAIR1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 SV=1)
HSP 1 Score: 694 bits (1790), Expect = 1.21e-250
Identity = 363/374 (97.06%), Postives = 369/374 (98.66%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP
Sbjct: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
D KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS
Sbjct: 121 DYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
Query: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
SLLQSMNKEHDDMK+TLDGGFKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+N
Sbjct: 181 SLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQLKLKN 240
Query: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
DFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Sbjct: 241 DFISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
Query: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
ATAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIE
Sbjct: 301 ATAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEEIE 360
Query: 361 RSFSCLIEEKKTGD 373
RSFSCLIEEKKTG+
Sbjct: 361 RSFSCLIEEKKTGE 374
BLAST of Csor.00g273690.m01 vs. ExPASy TrEMBL
Match:
A0A6J1IGR9 (protein PAIR1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 SV=1)
HSP 1 Score: 653 bits (1685), Expect = 7.10e-235
Identity = 347/374 (92.78%), Postives = 353/374 (94.39%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP
Sbjct: 61 QNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLP 120
Query: 121 DSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS 180
D KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDV
Sbjct: 121 DYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDV----------- 180
Query: 181 SLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRN 240
Q NKEHDDMK+TLDGGFKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+N
Sbjct: 181 ---QCQNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQVQASQLKLKN 240
Query: 241 DFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
DFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Sbjct: 241 DFISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR 300
Query: 301 ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIE 360
ATAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIE
Sbjct: 301 ATAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYRVIVDSDEEIE 360
Query: 361 RSFSCLIEEKKTGD 373
RSFSCLIEEKKTG+
Sbjct: 361 RSFSCLIEEKKTGE 360
BLAST of Csor.00g273690.m01 vs. TAIR 10
Match:
AT1G01690.1 (putative recombination initiation defects 3 )
HSP 1 Score: 219.2 bits (557), Expect = 5.8e-57
Identity = 155/432 (35.88%), Postives = 244/432 (56.48%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQ 60
M++ INKACDL SISV PP R +A Q + QLRSQ SQQSFSQG SS G SQ
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRSA--EPQASQQLRSQQSQQSFSQGPSSSQRGCGGFSQ 60
Query: 61 FSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSREECQLPLSKSSTSLTQRWKST 120
+Q+S DE++ N+QRFSSQ+R+ S+KK +S PP+++ RE+ QL S+SS+ L++RW S
Sbjct: 61 MTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRWSSA 120
Query: 121 PLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVI 180
+ +SK Q+ EEL++R G +E SL++FG +LDS+ DI+ N+G K++ L+ E I QK+
Sbjct: 121 SIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQKLT 180
Query: 181 VNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLK 240
+ + LQ + KE D K++LDGG K I ++ KD QE+L +I +L+ + +QV+ + K
Sbjct: 181 LQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETALQK 240
Query: 241 LRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA---- 300
++ + TFT+E++ ++ +L+ P + R +P+ A ++P+Q+ + K+ ++
Sbjct: 241 IQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSLKMP 300
Query: 301 SPDVCIRA-----------------------TAVQTE----------------------- 360
P V + A T ++T+
Sbjct: 301 EPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYLSPK 360
Query: 361 -EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEE-IERSFSC 377
+VG WK+VK K + KK +K + R E + V++DSDEE I+ FSC
Sbjct: 361 IQVGCWKTVKPEK-----SNFKKRATRKPVKSESTRTQFE-QCSVVIDSDEEDIDGGFSC 420
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q0WWX5 | 8.1e-56 | 35.88 | Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P... | [more] |
| Q75RY2 | 1.4e-28 | 36.93 | Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6597127.1 | 1.34e-262 | 100.00 | putative recombination initiation defects 3, partial [Cucurbita argyrosperma sub... | [more] |
| XP_022943732.1 | 2.02e-258 | 99.73 | protein PAIR1 isoform X2 [Cucurbita moschata] | [more] |
| XP_022943725.1 | 1.41e-256 | 99.47 | protein PAIR1 isoform X1 [Cucurbita moschata] | [more] |
| XP_023539314.1 | 5.54e-256 | 98.66 | protein PAIR1-like [Cucurbita pepo subsp. pepo] | [more] |
| KAG7028594.1 | 1.02e-252 | 93.70 | Protein PAIR1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FTV4 | 9.79e-259 | 99.73 | protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
| A0A6J1FY69 | 6.85e-257 | 99.47 | protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
| A0A6J1IAP9 | 1.73e-252 | 97.32 | protein PAIR1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 S... | [more] |
| A0A6J1IBT5 | 1.21e-250 | 97.06 | protein PAIR1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 S... | [more] |
| A0A6J1IGR9 | 7.10e-235 | 92.78 | protein PAIR1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G01690.1 | 5.8e-57 | 35.88 | putative recombination initiation defects 3 | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.CDS01 | Csor.00g273690.m01.CDS01 | CDS |
| Csor.00g273690.m01.CDS02 | Csor.00g273690.m01.CDS02 | CDS |
| Csor.00g273690.m01.CDS03 | Csor.00g273690.m01.CDS03 | CDS |
| Csor.00g273690.m01.CDS04 | Csor.00g273690.m01.CDS04 | CDS |
| Csor.00g273690.m01.CDS05 | Csor.00g273690.m01.CDS05 | CDS |
| Csor.00g273690.m01.CDS06 | Csor.00g273690.m01.CDS06 | CDS |
| Csor.00g273690.m01.CDS07 | Csor.00g273690.m01.CDS07 | CDS |
| Csor.00g273690.m01.CDS08 | Csor.00g273690.m01.CDS08 | CDS |
| Csor.00g273690.m01.CDS09 | Csor.00g273690.m01.CDS09 | CDS |
| Csor.00g273690.m01.CDS10 | Csor.00g273690.m01.CDS10 | CDS |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.stop_codon01 | Csor.00g273690.m01.stop_codon01 | stop_codon |
The following terminal feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.terminal01 | Csor.00g273690.m01.terminal01 | terminal |
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.intron01 | Csor.00g273690.m01.intron01 | intron |
| Csor.00g273690.m01.intron02 | Csor.00g273690.m01.intron02 | intron |
| Csor.00g273690.m01.intron03 | Csor.00g273690.m01.intron03 | intron |
| Csor.00g273690.m01.intron04 | Csor.00g273690.m01.intron04 | intron |
| Csor.00g273690.m01.intron05 | Csor.00g273690.m01.intron05 | intron |
| Csor.00g273690.m01.intron06 | Csor.00g273690.m01.intron06 | intron |
| Csor.00g273690.m01.intron07 | Csor.00g273690.m01.intron07 | intron |
| Csor.00g273690.m01.intron08 | Csor.00g273690.m01.intron08 | intron |
| Csor.00g273690.m01.intron09 | Csor.00g273690.m01.intron09 | intron |
The following internal feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.internal01 | Csor.00g273690.m01.internal01 | internal |
| Csor.00g273690.m01.internal02 | Csor.00g273690.m01.internal02 | internal |
| Csor.00g273690.m01.internal03 | Csor.00g273690.m01.internal03 | internal |
| Csor.00g273690.m01.internal04 | Csor.00g273690.m01.internal04 | internal |
| Csor.00g273690.m01.internal05 | Csor.00g273690.m01.internal05 | internal |
| Csor.00g273690.m01.internal06 | Csor.00g273690.m01.internal06 | internal |
| Csor.00g273690.m01.internal07 | Csor.00g273690.m01.internal07 | internal |
| Csor.00g273690.m01.internal08 | Csor.00g273690.m01.internal08 | internal |
The following initial feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.initial01 | Csor.00g273690.m01.initial01 | initial |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01.start_codon01 | Csor.00g273690.m01.start_codon01 | start_codon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g273690.m01 | Csor.00g273690.m01-protein | polypeptide |
