Csor.00g254640.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g254640.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	chaperone protein dnaJ 20, chloroplastic-like
Location	Csor_Chr06: 9048744 .. 9049959 (-)
Sequence length	615
RNA-Seq Expression	Csor.00g254640.m01
Synteny	Csor.00g254640.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTGCTCCGATTTTACCTACTCTGTTGGCGATTACCGCATCTTAATCCCTTCCAGCCCTAGTATCACCGGCCGGCGGCAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAATACTCCGCCGTGCAATTCGACTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTCGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACATTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATACGATGTCGATGAGGTATTGGTTCAATTTGTATATCGATTCTCGTTTGTATTTCAGTATTTTAGGGGAAATTGCGTTTGATTGTTGGTGGATTTTGAAATCTTCTGTGTTGATTTTGTGTTTGCCCTTGTTTTTGAGGTGGTTTCATGTTTAATTGGTATGAGTGAAGGATATTTTCTTGTTAGATGCTCCTTTGGTTCTGGATTTTTGGTGTGAGGAAAGGAATCGTCCGCTTCTGGTTCTTTGTTCCTTTTTTTGGTAGTTTTCTGACTCTATCTGATAAATGCTGCTGAAGGAATGGTGGAGAGCGGTACCGTTCCTATTGGAGCAAGGGTATTCAATTCTTTGTTATTCTTTGTTCTGTAATTATGACTAAGAGATCGATTGCAATTGGCTAATCTACAGTTTTCTCGACAACTTTCTCCAAATATGGAATTTCTTTCCTACTTCATTTGATTGTGTTTCTAGAAAGTCTGAAATTACTTTGTCAACGTCTCCCAGAAATCTTTCCCCGCTGTATCAAACAAAAACTTGAGTAAATCCCACCTGGGACCTGCCATTTTTGATCTTCCATTTGAATGTCATAACTCAATCTTTCAATTTGACTTGAATCCAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGCTCGAATGCGCCAACAAATGAATGAACAGGTTTGA

mRNA sequence

ATGCAGTGCTCCGATTTTACCTACTCTGTTGGCGATTACCGCATCTTAATCCCTTCCAGCCCTAGTATCACCGGCCGGCGGCAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAATACTCCGCCGTGCAATTCGACTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTCGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACATTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATACGATGTCGATGAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGCTCGAATGCGCCAACAAATGAATGAACAGGTTTGA

Coding sequence (CDS)

ATGCAGTGCTCCGATTTTACCTACTCTGTTGGCGATTACCGCATCTTAATCCCTTCCAGCCCTAGTATCACCGGCCGGCGGCAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAATACTCCGCCGTGCAATTCGACTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTCGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACATTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATACGATGTCGATGAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGCTCGAATGCGCCAACAAATGAATGAACAGGTTTGA

Protein sequence

MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRRSMDKDSKHNLSWGARMRQQMNEQV

Homology

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42
Identity = 95/158 (60.13%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 47  TRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSP 106
           TR  S  I+++ + +  +  SE  D SFYDLLG++ES +L EIK+AYKQLARKYHPDVSP
Sbjct: 42  TRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 101

Query: 107 PGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARR--RYDVDEGVPDKS 166
           P R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS RR  RYD  E V +KS
Sbjct: 102 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD-QEVVEEKS 161

Query: 167 AWKSCWKAQISELKRRSMDKDSKHNLSWGARMRQQMNE 203
            WK+ W+ Q+S L+RRS  KD+ + +SW ARMR+Q  E
Sbjct: 162 EWKAKWQTQLSGLRRRSNQKDN-NTMSWAARMRRQQQE 195

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot
Match: A5VJE8 (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           A+  +YD+LG+S+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLSD
Sbjct: 2   AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLSD 61

Query: 130 PRRRALYDRDMVGGLQVA 148
            ++RA YD+    G Q A
Sbjct: 62  SQKRAQYDQFGSAGPQGA 76

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot
Match: B2G6W4 (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           A+  +YD+LG+S+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLSD
Sbjct: 2   AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLSD 61

Query: 130 PRRRALYDRDMVGGLQVA 148
            ++RA YD+    G Q A
Sbjct: 62  SQKRAQYDQFGSAGPQGA 76

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot
Match: Q05646 (Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae OX=1648 GN=dnaJ PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 74  FYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRR 133
           FY++LG+S+S + AEIK+AY+QLA+KYHPD++    AE    +F  VQEAYE LSD ++R
Sbjct: 7   FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAE---AKFKEVQEAYEVLSDSQKR 66

Query: 134 ALYDR 139
           A YD+
Sbjct: 67  ANYDQ 68

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot
Match: B7KEJ8 (Chaperone protein DnaJ OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 72  GSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPR 131
           G +Y++LG+S   +  EIKRAY++LARKYHPDV+    AEE   RF  +  AYE LS+P 
Sbjct: 3   GDYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEE---RFKEINRAYEILSEPE 62

Query: 132 RRALYDRDMVGGLQVAFSARRRYDVDEGVPD 163
            RA YDR    G+     +   Y    G+ D
Sbjct: 63  TRARYDRFGEAGVSSGAGSGFEYGDMGGIAD 90

[Close]

BLAST of Csor.00g254640.m01 vs. NCBI nr
Match: KAG6597272.1 (Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406 bits (1044), Expect = 6.38e-143
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR
Sbjct: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 181 SMDKDSKHNLSWGARMRQQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. NCBI nr
Match: KAG7028743.1 (Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405 bits (1041), Expect = 1.83e-142
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELK+R
Sbjct: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKKR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 181 SMDKDSKHNLSWGARMRQQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. NCBI nr
Match: XP_022949677.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 405 bits (1041), Expect = 6.19e-142
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 35  MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 94

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 95  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 154

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELK+R
Sbjct: 155 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKKR 214

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 215 SMDKDSKHNLSWGARMRQQMNEQV 238

[Close]

BLAST of Csor.00g254640.m01 vs. NCBI nr
Match: XP_022974737.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 400 bits (1028), Expect = 1.76e-140
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYS GDYRILIPSSPSITGRRQISGQ+SRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 1   MQCSDFTYSGGDYRILIPSSPSITGRRQISGQKSRVFFPNTPPCNSTRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIAS EAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 61  NGGIASFEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR
Sbjct: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 181 SMDKDSKHNLSWGARMRQQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. NCBI nr
Match: XP_023539417.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397 bits (1019), Expect = 7.08e-139
Identity = 199/204 (97.55%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYS GDYRILIPSSPSITGRR+ISGQRSRVFFPNTPPCNS+RLPSLSIRAKASF
Sbjct: 16  MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASF 75

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 76  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 135

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRR+DVDEGVPDKSAWKSCWKAQISELKRR
Sbjct: 136 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRR 195

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWG RMRQQMNEQV
Sbjct: 196 SMDKDSKHNLSWGDRMRQQMNEQV 219

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL
Match: A0A6J1GCT3 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452997 PE=4 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 3.00e-142
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 35  MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 94

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 95  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 154

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELK+R
Sbjct: 155 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKKR 214

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 215 SMDKDSKHNLSWGARMRQQMNEQV 238

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL
Match: A0A6J1IB32 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473471 PE=4 SV=1)

HSP 1 Score: 400 bits (1028), Expect = 8.50e-141
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFTYS GDYRILIPSSPSITGRRQISGQ+SRVFFPNTPPCNSTRLPSLSIRAKASF
Sbjct: 1   MQCSDFTYSGGDYRILIPSSPSITGRRQISGQKSRVFFPNTPPCNSTRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           NGGIAS EAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV
Sbjct: 61  NGGIASFEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR
Sbjct: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SMDKDSKHNLSWGARMRQQMNEQV
Sbjct: 181 SMDKDSKHNLSWGARMRQQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL
Match: A0A1S3AWS2 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483465 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 9.51e-112
Identity = 164/204 (80.39%), Postives = 181/204 (88.73%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFT+S  D R  IPS+P+I+ RR ISG RSRVFFP+TPP NSTRLPSLSIRAKASF
Sbjct: 27  MQCSDFTFSGSDSRFYIPSNPTISARRPISGYRSRVFFPHTPPFNSTRLPSLSIRAKASF 86

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N G  SSE A+GSFYDLLGIS+SGSLAEIKRAYKQLARKYHPDVSPPG AEEYTK FIRV
Sbjct: 87  NEGFVSSEVAEGSFYDLLGISQSGSLAEIKRAYKQLARKYHPDVSPPGGAEEYTKMFIRV 146

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDM+GGLQVAFSARRRYD  E V +KS W++ W+AQISELKRR
Sbjct: 147 QEAYETLSDPRRRALYDRDMIGGLQVAFSARRRYDAAEEVAEKSGWRNSWEAQISELKRR 206

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SM+KD + N+SWGARMR+QMNEQ+
Sbjct: 207 SMEKDLRQNMSWGARMRRQMNEQI 230

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL
Match: A0A6J1IRB6 (chaperone protein dnaJ 20, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479792 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 4.47e-111
Identity = 164/204 (80.39%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQCSDFT+S  D R  IPSSPSITGRR I+G RS +FFPNT PCN TRLPSLSIRAKASF
Sbjct: 1   MQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSCIFFPNTLPCNLTRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N GI SSE +DGSFYDLLG+SES SLAEIKRAYK LARKYHPDVSP G+AEEYTKRFIRV
Sbjct: 61  NEGIVSSEVSDGSFYDLLGVSESVSLAEIKRAYKHLARKYHPDVSPIGQAEEYTKRFIRV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
            EAYETLSDPRRRALYDRDMVGGLQVAFSA R YD D+  P+KS W+SCW+ QISEL RR
Sbjct: 121 HEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQFQISELNRR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SM+KDS  N+SWGARMR+QMNEQV
Sbjct: 181 SMNKDSSQNMSWGARMRRQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL
Match: A0A6J1E8M4 (chaperone protein dnaJ 20, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431786 PE=4 SV=1)

HSP 1 Score: 324 bits (830), Expect = 1.28e-110
Identity = 164/204 (80.39%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 1   MQCSDFTYSVGDYRILIPSSPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASF 60
           MQC DFT+S  D R  IPSSPSITGRR I+G RS +FFPNT PCN  RLPSLSIRAKASF
Sbjct: 1   MQCPDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKASF 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N GI SSE ADGSFYDLLG+SES SLAEIKRAYK LARKYHPDVSP G AEEYTKRFIR 
Sbjct: 61  NEGIVSSEVADGSFYDLLGVSESVSLAEIKRAYKHLARKYHPDVSPIGCAEEYTKRFIRF 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRYDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDMVGGLQVAFSA R YD D+  P+KS W+SCW++QISELKRR
Sbjct: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKRR 180

Query: 181 SMDKDSKHNLSWGARMRQQMNEQV 204
           SM+KDS  N+SWGARMR+QMNEQV
Sbjct: 181 SMNKDSSQNMSWGARMRRQMNEQV 204

[Close]

BLAST of Csor.00g254640.m01 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 95/158 (60.13%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 47  TRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSP 106
           TR  S  I+++ + +  +  SE  D SFYDLLG++ES +L EIK+AYKQLARKYHPDVSP
Sbjct: 42  TRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 101

Query: 107 PGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARR--RYDVDEGVPDKS 166
           P R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS RR  RYD  E V +KS
Sbjct: 102 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD-QEVVEEKS 161

Query: 167 AWKSCWKAQISELKRRSMDKDSKHNLSWGARMRQQMNE 203
            WK+ W+ Q+S L+RRS  KD+ + +SW ARMR+Q  E
Sbjct: 162 EWKAKWQTQLSGLRRRSNQKDN-NTMSWAARMRRQQQE 195

[Close]

BLAST of Csor.00g254640.m01 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 )

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-32
Identity = 72/111 (64.86%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 47  TRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSP 106
           TR  S  I+++ + +  +  SE  D SFYDLLG++ES +L EIK+AYKQLARKYHPDVSP
Sbjct: 42  TRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 101

Query: 107 PGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARR--RYD 156
           P R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS RR  RYD
Sbjct: 102 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD 150

[Close]

BLAST of Csor.00g254640.m01 vs. TAIR 10
Match: AT2G22360.1 (DNAJ heat shock family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           AD  +Y +LG+S++ + AEIK AY++LAR YHPDV+    AEE   +F  +  AYE LSD
Sbjct: 83  ADADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEE---KFKEISNAYEVLSD 142

Query: 130 PRRRALYDRDMVGGLQVA 148
             +++LYDR    GL+ A
Sbjct: 143 DEKKSLYDRYGEAGLKGA 157

[Close]

BLAST of Csor.00g254640.m01 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.7e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           AD  FY +LG+S++ + AEIK AY++LAR YHPDV+    AE+   +F  +  AYE LSD
Sbjct: 82  ADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAED---KFKEISNAYEILSD 141

Query: 130 PRRRALYDRDMVGGLQVA 148
             +R+LYDR    G++ A
Sbjct: 142 DEKRSLYDRYGEAGVKGA 156

[Close]

BLAST of Csor.00g254640.m01 vs. TAIR 10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-12
Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 16  LIPS-SPSITGRRQISGQRSRVFFPNTPPCNSTRLPSLSIRAKASFNGGI---ASSEAAD 75
           LIPS +P+ + R Q     +  + P T       LP  S   +   +GG      + AA 
Sbjct: 9   LIPSINPAHSFRHQFPQPNASFYLPPT-------LPIFSRVRRFGISGGYRRRVITMAAG 68

Query: 76  GSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPR 135
              Y  L ++ + +L EIK +Y++LARKYHPD++    AE+   +F ++  AYE LSD  
Sbjct: 69  TDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAED---KFKQISAAYEVLSDEE 128

Query: 136 RRALYDRDMVGGLQVAFSARRRYDVDEGV 161
           +R+ YDR    GL+  F+  +  D   GV
Sbjct: 129 KRSAYDRFGEAGLEGDFNGSQ--DTSPGV 145

The following BLAST results are available for this feature:

BLAST of Csor.00g254640.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDN0	3.6e-42	60.13	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]
A5VJE8	1.8e-12	50.00	Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=...	[more]
B2G6W4	1.8e-12	50.00	Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=d...	[more]
Q05646	2.3e-12	55.38	Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae OX=1648 GN=dnaJ PE=2 SV=1	[more]
B7KEJ8	2.3e-12	43.96	Chaperone protein DnaJ OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=d...	[more]

BLAST of Csor.00g254640.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597272.1	6.38e-143	100.00	Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
KAG7028743.1	1.83e-142	99.51	Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022949677.1	6.19e-142	99.51	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]	[more]
XP_022974737.1	1.76e-140	98.53	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]	[more]
XP_023539417.1	7.08e-139	97.55	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g254640.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCT3	3.00e-142	99.51	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IB32	8.50e-141	98.53	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3AWS2	9.51e-112	80.39	chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1IRB6	4.47e-111	80.39	chaperone protein dnaJ 20, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1E8M4	1.28e-110	80.39	chaperone protein dnaJ 20, chloroplastic-like isoform X1 OS=Cucurbita moschata O...	[more]

BLAST of Csor.00g254640.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13830.2	2.6e-43	60.13	DNAJ-like 20	[more]
AT4G13830.1	4.6e-32	64.86	DNAJ-like 20	[more]
AT2G22360.1	3.6e-13	47.44	DNAJ heat shock family protein	[more]
AT4G39960.1	4.7e-13	47.44	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT3G17830.1	6.8e-12	33.56	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 132..151 score: 23.61 coord: 112..132 score: 39.13 coord: 75..93 score: 45.37 coord: 93..108 score: 48.68
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 72..132 e-value: 3.3E-21 score: 86.5
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 74..137 e-value: 6.7E-21 score: 74.2
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 73..140 score: 20.189951
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 74..129 e-value: 3.62591E-20 score: 77.9709
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 62..159 e-value: 4.5E-23 score: 83.3
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 73..147
None	No IPR available	PANTHER	PTHR45090:SF4	CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC	coord: 11..203
None	No IPR available	PANTHER	PTHR45090	CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC	coord: 11..203
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 117..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g254640	Csor.00g254640	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.CDS02	Csor.00g254640.m01.CDS02	CDS
Csor.00g254640.m01.CDS01	Csor.00g254640.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.terminal01	Csor.00g254640.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.stop_codon01	Csor.00g254640.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.intron01	Csor.00g254640.m01.intron01	intron

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.initial01	Csor.00g254640.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01.start_codon01	Csor.00g254640.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g254640.m01	Csor.00g254640.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0009507	chloroplast