Csor.00g254350.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g254350.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr06: 9241222 .. 9243642 (-)
Sequence length	717
RNA-Seq Expression	Csor.00g254350.m01
Synteny	Csor.00g254350.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGAGCGTCCTTTGATTAGGGTTTTCGGCCAGCGTTCAATTTCATCGTCTTTCCGCTCCTGTTCTTCAAATCCGTAATCTATCGGTCATGATTCTATTTTTTCTCTCTCGACTTTATGTGTTTATTAATTTGTTGTACGTTTTTAATTTCTGGTTCGAAACAGTTTCAAGAGTTCGAATGAAGTTTCCCAAAGCAAATCTATTAAGAAGAGCTCGCATTTGTCGCTCTCGGAATTCCTCGATCGAAAACTGCCGGAATCTTTCGTACTGCAGAGGACGGTGAAGGTAACGAGTTTTGCCTCAGTTTTTTCTGTCTACCTGTCAATTGGAGTTTTAGATTGCGTTTATTTAGGTCTGATTTTTCGATCGGACGTAGAAAATCAAAATGAGAAGACGATCGATGAAATTCGATGGTGATTTTAGCTTCGTTGACGATTTGGTTTCTTCTTCTTTCTTTTTATCCGGCTTTAAAACACTATTTATTGATGAATCTTTAATTTCATGTGTATAATGCGAAATACAAAGGGGAAAAAGTGGAAAATCAAATTTAGAGTGTTAGGAAAGCCATTGATTCCGTTCTTTATACACAGGGGAAGTCCACGCCCTTCTCCTCATTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCGGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTCAAAGTTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATATTAAGTGAAGGCTTTGCTTCCACTACCCCATGTAATTGGCTTACTCTCGTAAGCTATGAAGATTTTGTGTTTGAATGGCTGATGATACTTGAACTTTGTTAACTTTTACCATCAGGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTGTAAGTATTTGCCATCTTCTTAATACGCTTTTGTTTCTCATATGAATCGCCTCCTTCCCCTTTTGCTCGGATTTTAAACGGTGATGTCCCATATTGATCGGGGAGGAGAACAAACCATTATTTACAAGGGAGTGGAAACCTTCCCCTAGCATACGCGTTTTAAAACCTTCAGGGGAAGCCTAAAAAGGACAATATCTGCTAGCGGTGGGCTTGAGCCATTACAAATGGTATCACAGTCAAACACCGGACAGTGTGTCAGCTTTCTCGCTGTTCCCCAAAGGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGTTGGGCTCCAAAGGGGTGGATTTGAGGGTGGTCCCACATCGATTAGAGGAAGGAAAGAGTGTCAGTGAGGATGCTGGGCCCCAAAGAGGGATGGATTGTGATGTCCCACATTGGTTGGGGAAAAGAACAAACCGCCATTTATAAGGGTGTGGAAACCTTCCCTCCTAAAGGGGGAAGACACGATGCGGTGTGCCAGTAAGGACGTTGGGCCCCAAAGGGGGGTGGATTTGGGGGCGGTCCCCCATCGATGGGAGGAAGGAAAGAGAGCCAATGAGGATGTTGGGCCCCAAAGGAGGGTGGATTGTGATGTCCCACATTGGTTGAAGATGAGAACAAATCGTCCTTTATAAAGGTGTGGAAACCTTCCCGTAGCACAGGTGTTTTAATCAAAGGGATACTAGTGGTGATTATTTATTTAGAAACTTAGCAAGTAACCAACAACTATGCATACTAAACTTATTGTTCACGAGTTTAGTTCCAAACTTTTATGTCCATGTCCATTAGTTTGTAAATTTTTAAAAGTATTTAATAGATTCTTAATCTTAAAAGGTGTAATAGATTCTTAAGTTTTCAATTTTAGATTTAGATCAGTTATATATTTAATTTTTTTTTAAATAATTTGATTTATATGATTAAATTTATTCTTGTATTTTGAGAAAGGTTGAAATAAGAAATTCAAAAACTTATTAGAACCCATTAAATACCATTTAAAGATTTACAATCAAATAGATATAAATTTTAAAATTAAGAGACCAAATAAGGTTGGAGGTAAAAAAAAAATAGTTTTTTAAATGTAAAGTTTAAAGAATAAAACTACATATTTACCATTATGTATGGTAACTTCTTCGGTTTAAACTGTTTTATTAACCTTCCGATTCATGGTAACTTCTTGTTTTTGCCAACTGTGCAGATGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAGGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

mRNA sequence

ATGAACAACGAGCGTCCTTTGATTAGGGTTTTCGGCCAGCGTTCAATTTCATCGTCTTTCCGCTCCTGTTCTTCAAATCCTTTCAAGAGTTCGAATGAAGTTTCCCAAAGCAAATCTATTAAGAAGAGCTCGCATTTGTCGCTCTCGGAATTCCTCGATCGAAAACTGCCGGAATCTTTCGTACTGCAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCATTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCGGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTCAAAGTTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATATTAAGTGAAGGCTTTGCTTCCACTACCCCATGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTATGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAGGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

Coding sequence (CDS)

ATGAACAACGAGCGTCCTTTGATTAGGGTTTTCGGCCAGCGTTCAATTTCATCGTCTTTCCGCTCCTGTTCTTCAAATCCTTTCAAGAGTTCGAATGAAGTTTCCCAAAGCAAATCTATTAAGAAGAGCTCGCATTTGTCGCTCTCGGAATTCCTCGATCGAAAACTGCCGGAATCTTTCGTACTGCAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCATTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCGGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTCAAAGTTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATATTAAGTGAAGGCTTTGCTTCCACTACCCCATGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTATGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAGGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

Protein sequence

MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESFVLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQSQSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

Homology

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BLAST of Csor.00g254350.m01 vs. NCBI nr
Match: KAG6597301.1 (hypothetical protein SDJN03_10481, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 465 bits (1196), Expect = 5.80e-165
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR
Sbjct: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. NCBI nr
Match: XP_022935388.1 (uncharacterized protein LOC111442284 [Cucurbita moschata])

HSP 1 Score: 460 bits (1184), Expect = 3.92e-163
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCE QARKKNVVVLGGDPKPEKKR
Sbjct: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCEGQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRN KPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNIKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. NCBI nr
Match: XP_023522097.1 (uncharacterized protein LOC111785973 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454 bits (1168), Expect = 1.08e-160
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSFRSCSSNPFKSSNEVS+SKS KKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPPIRVFGQRSISSSFRSCSSNPFKSSNEVSESKSTKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           V QRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           +SSVLSGASEADIFSTDDMLESRKRK+LSEGFASTTPCESQARKKNVVVLGGDPKPEKKR
Sbjct: 121 ESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. NCBI nr
Match: XP_022975489.1 (uncharacterized protein LOC111474871 [Cucurbita maxima])

HSP 1 Score: 451 bits (1159), Expect = 2.54e-159
Identity = 231/238 (97.06%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSFRSCSSNPFKSSNEVS+SKS KKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPPIRVFGQRSISSSFRSCSSNPFKSSNEVSESKSTKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           VLQRTVKGKSTPFSSLQGPRDANSSMNKP GIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPTGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           QSSVLS AS ADIFSTDDML+SRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR
Sbjct: 121 QSSVLSDASGADIFSTDDMLDSRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. NCBI nr
Match: XP_038899723.1 (uncharacterized protein LOC120086964 [Benincasa hispida])

HSP 1 Score: 346 bits (888), Expect = 4.11e-118
Identity = 184/238 (77.31%), Postives = 203/238 (85.29%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSF S SSNPF  +NE SQSK  KKSS LSLS+FLDRKLPE+ 
Sbjct: 1   MNNERPPIRVFGQRSISSSFLSRSSNPF--TNEDSQSKLSKKSSQLSLSDFLDRKLPETS 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           + QRTVKGKSTPFSSLQGPR++N   N PIGI   TDSQTES+ISKVLFE+FKRSEPNQ 
Sbjct: 61  LPQRTVKGKSTPFSSLQGPRNSN---NGPIGIDCGTDSQTESSISKVLFEQFKRSEPNQG 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           +  V   ASEADIF+TDD+LESRKRK  SEGF ST PCESQ RKKNVVV+GGDPKP++K 
Sbjct: 121 EYLVSGSASEADIFNTDDILESRKRKKSSEGFVSTYPCESQTRKKNVVVIGGDPKPKQKG 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           +EA+H +RNK+ K LYNHYASG GWWDC+ EGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 KEAIHVVRNKRTKSLYNHYASGSGWWDCNREGVDSEEVGLGEVWEGVGSTTLGGIEWH 233

[Close]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL
Match: A0A6J1FAE9 (uncharacterized protein LOC111442284 OS=Cucurbita moschata OX=3662 GN=LOC111442284 PE=4 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 1.90e-163
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCE QARKKNVVVLGGDPKPEKKR
Sbjct: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCEGQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRN KPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNIKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL
Match: A0A6J1IKN5 (uncharacterized protein LOC111474871 OS=Cucurbita maxima OX=3661 GN=LOC111474871 PE=4 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 1.23e-159
Identity = 231/238 (97.06%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSFRSCSSNPFKSSNEVS+SKS KKSSHLSLSEFLDRKLPESF
Sbjct: 1   MNNERPPIRVFGQRSISSSFRSCSSNPFKSSNEVSESKSTKKSSHLSLSEFLDRKLPESF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           VLQRTVKGKSTPFSSLQGPRDANSSMNKP GIHYETDSQTESAISKVLFEEFKRSEPNQS
Sbjct: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPTGIHYETDSQTESAISKVLFEEFKRSEPNQS 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           QSSVLS AS ADIFSTDDML+SRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR
Sbjct: 121 QSSVLSDASGADIFSTDDMLDSRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
           REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238

[Close]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL
Match: A0A5A7U046 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003970 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 8.68e-118
Identity = 183/238 (76.89%), Postives = 201/238 (84.45%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSF S SSNPFKSSN+ SQSK  KK+S LSLS+FLDRKLPE+ 
Sbjct: 1   MNNERPPIRVFGQRSISSSFLSRSSNPFKSSNDDSQSKLAKKNSQLSLSDFLDRKLPETS 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           V QRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKRSEP+Q 
Sbjct: 61  VPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKRSEPSQC 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           +  V   ASE DIF+TDD+LESRKRK  +EGF STTPCESQ RK NVVV+GGDP+PE+K 
Sbjct: 121 EYLVSGSASERDIFNTDDILESRKRKKSNEGFISTTPCESQTRKMNVVVIGGDPRPEQKG 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
            + +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 MQPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 235

[Close]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL
Match: A0A1S3AWV7 (uncharacterized protein LOC103483493 OS=Cucumis melo OX=3656 GN=LOC103483493 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 8.68e-118
Identity = 183/238 (76.89%), Postives = 201/238 (84.45%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSF S SSNPFKSSN+ SQSK  KK+S LSLS+FLDRKLPE+ 
Sbjct: 1   MNNERPPIRVFGQRSISSSFLSRSSNPFKSSNDDSQSKLAKKNSQLSLSDFLDRKLPETS 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           V QRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKRSEP+Q 
Sbjct: 61  VPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKRSEPSQC 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           +  V   ASE DIF+TDD+LESRKRK  +EGF STTPCESQ RK NVVV+GGDP+PE+K 
Sbjct: 121 EYLVSGSASERDIFNTDDILESRKRKKSNEGFISTTPCESQTRKMNVVVIGGDPRPEQKG 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
            + +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 MQPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 235

[Close]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL
Match: A0A5D3D1M8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002580 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 2.48e-117
Identity = 182/238 (76.47%), Postives = 201/238 (84.45%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           MNNERP IRVFGQRSISSSF S SSNPFKSSN+ SQSK  KK+S LSLS+FLDRKLPE+ 
Sbjct: 1   MNNERPPIRVFGQRSISSSFLSRSSNPFKSSNDDSQSKLAKKNSQLSLSDFLDRKLPETS 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
           V QRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKRSEP+Q 
Sbjct: 61  VPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKRSEPSQC 120

Query: 121 QSSVLSGASEADIFSTDDMLESRKRKILSEGFASTTPCESQARKKNVVVLGGDPKPEKKR 180
           +  V   ASE DIF+TDD+LESRKRK  +EGF STTPCESQ RK NVVV+GGDP+P++K 
Sbjct: 121 EYLVSGSASERDIFNTDDILESRKRKKSNEGFISTTPCESQTRKMNVVVIGGDPRPQQKG 180

Query: 181 REAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 238
            + +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Sbjct: 181 MQPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 235

[Close]

BLAST of Csor.00g254350.m01 vs. TAIR 10
Match: AT4G13690.1 (unknown protein; Has 37 Blast hits to 37 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 0


Query: 1   MNNERPLIRVFGQRSISSSFRSCSSNPFKSSNEVSQSKSIKKSSHLSLSEFLDRKLPESF 60
           M    P IRVFGQRSI+SSF + SS P  +++E +  + ++  S L+ S       P +F
Sbjct: 1   MKKPIPKIRVFGQRSIASSFLNLSSIPVDNTSE-NPPEKVENRSKLNKSVLFK---PNNF 60

Query: 61  VLQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQS 120
                 + +  PF+SL   +D   S+ +      E     +  + K++ ++FK  E   S
Sbjct: 61  ------EERLRPFTSLVSSKDRLISLIERKA--REEKKNGDGGLEKMMLQQFKPREIQIS 120

Query: 121 Q--SSVLSG-----------ASEAD---IFSTD--------DMLESRKRKILSEGFASTT 180
           +  S  ++G           A E D    +ST+        D   S+KRK   EG     
Sbjct: 121 EEVSRDVTGDVNLEPVDQTAAEETDHMAPYSTEINEDIIVRDDKTSKKRKDPFEGM---- 180

Query: 181 PCESQARKKNVVVLGGD----PKPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEG 239
             ES +R    V++ GD     KP ++ RE   +  +KK +P+YNHYA+G GWWDCDMEG
Sbjct: 181 --ESMSRTGKSVMVFGDNSKVSKPMQRERERRSNNNSKKQRPIYNHYANGSGWWDCDMEG 240

The following BLAST results are available for this feature:

BLAST of Csor.00g254350.m01 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g254350.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597301.1	5.80e-165	100.00	hypothetical protein SDJN03_10481, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935388.1	3.92e-163	99.16	uncharacterized protein LOC111442284 [Cucurbita moschata]	[more]
XP_023522097.1	1.08e-160	97.48	uncharacterized protein LOC111785973 [Cucurbita pepo subsp. pepo]	[more]
XP_022975489.1	2.54e-159	97.06	uncharacterized protein LOC111474871 [Cucurbita maxima]	[more]
XP_038899723.1	4.11e-118	77.31	uncharacterized protein LOC120086964 [Benincasa hispida]	[more]

BLAST of Csor.00g254350.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAE9	1.90e-163	99.16	uncharacterized protein LOC111442284 OS=Cucurbita moschata OX=3662 GN=LOC1114422...	[more]
A0A6J1IKN5	1.23e-159	97.06	uncharacterized protein LOC111474871 OS=Cucurbita maxima OX=3661 GN=LOC111474871...	[more]
A0A5A7U046	8.68e-118	76.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3AWV7	8.68e-118	76.89	uncharacterized protein LOC103483493 OS=Cucumis melo OX=3656 GN=LOC103483493 PE=...	[more]
A0A5D3D1M8	2.48e-117	76.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g254350.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13690.1	2.8e-25	36.70	unknown protein; Has 37 Blast hits to 37 proteins in 16 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..45
None	No IPR available	PANTHER	PTHR38382	RNA-BINDING PROTEIN	coord: 3..238

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g254350	Csor.00g254350	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.CDS05	Csor.00g254350.m01.CDS05	CDS
Csor.00g254350.m01.CDS04	Csor.00g254350.m01.CDS04	CDS
Csor.00g254350.m01.CDS03	Csor.00g254350.m01.CDS03	CDS
Csor.00g254350.m01.CDS02	Csor.00g254350.m01.CDS02	CDS
Csor.00g254350.m01.CDS01	Csor.00g254350.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.terminal01	Csor.00g254350.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.stop_codon01	Csor.00g254350.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.intron04	Csor.00g254350.m01.intron04	intron
Csor.00g254350.m01.intron03	Csor.00g254350.m01.intron03	intron
Csor.00g254350.m01.intron02	Csor.00g254350.m01.intron02	intron
Csor.00g254350.m01.intron01	Csor.00g254350.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.internal03	Csor.00g254350.m01.internal03	internal
Csor.00g254350.m01.internal02	Csor.00g254350.m01.internal02	internal
Csor.00g254350.m01.internal01	Csor.00g254350.m01.internal01	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.initial01	Csor.00g254350.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01.start_codon01	Csor.00g254350.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g254350.m01	Csor.00g254350.m01-protein	polypeptide