Csor.00g254030.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g254030.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr06: 9457254 .. 9458855 (+)
Sequence length	1602
RNA-Seq Expression	Csor.00g254030.m01
Synteny	Csor.00g254030.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTGTAGCTCGGTCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCATATACGTGCTTAG

mRNA sequence

ATGTTCTTTGTAGCTCGGTCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCATATACGTGCTTAG

Coding sequence (CDS)

ATGTTCTTTGTAGCTCGGTCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCATATACGTGCTTAG

Protein sequence

MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHIRA

Homology

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BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 6.6e-112
Identity = 191/481 (39.71%), Postives = 297/481 (61.75%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           N  IS  +RNG  E A+KLFDEMP+R++V+WN MI+GY  N        LF  MPERD+ 
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 110 SYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKD 169
           S+NT+++G  Q G VDDA+ +FD MP ++ VSWN++++ YV+N  +E+A  LF       
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218

Query: 170 VISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPM 229
           ++SWN ++GG V   K+  A ++F  MN RD+VSW  +I+G A++G++D+AR+LF+  P+
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278

Query: 230 KDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEM 289
           +D   W AM++GYI+N  +E A ELF+KMPERN  SWN ++ G V  +R++ A+ LF  M
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338

Query: 290 PEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFE 349
           P +   TWN ++  Y + G + E   + +K P  + VSW  +I GY              
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY-------------- 398

Query: 350 SIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQL 409
                             ++    E L+LF +M R G RL++++F+S L+ C+++ AL+L
Sbjct: 399 -----------------SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 458

Query: 410 GRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAH 469
           G+Q HG ++K G+     V NA++ MY +CG+++ A   F+ M+ +D++SWN++I G++ 
Sbjct: 459 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 518

Query: 470 HGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSE 529
           HG G+ AL   E M+   ++P+  T + VLSACSH GLV++GR YF  M  +  + P S+
Sbjct: 519 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 548

Query: 530 H 531
           H
Sbjct: 579 H 548

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BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 347.4 bits (890), Expect = 2.8e-94
Identity = 169/492 (34.35%), Postives = 291/492 (59.15%), Query Frame = 0


Query: 40  PPTFSNLKPLNFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISL 99
           PPT       N  I+   R G + EA+KLFD    +++ +WNSM+ GYF N         
Sbjct: 17  PPT------ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFAN--------- 76

Query: 100 FRRMPERDIFSYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAI 159
              MP                     DA+++FD MP R+++SWN +++GY++NG +++A 
Sbjct: 77  --LMPR--------------------DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEAR 136

Query: 160 QLFDEMPLKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDK 219
           ++FD MP ++V+SW  ++ G V+ GK+D AE  F KM  ++ VSWT+M+ G  + GR+D 
Sbjct: 137 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDD 196

Query: 220 ARKLFENMPMKDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRV 279
           A KL+E +P KD+ A  +M+ G  + G+++ A E+F++M ER+  +W  +V G   + RV
Sbjct: 197 ACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 256

Query: 280 DDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIG 339
           DDAR++F  MPEK + +W ++++ Y++NG +++   + E  P   +++   +I G    G
Sbjct: 257 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 316

Query: 340 EVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLT 399
           E+  A ++F+S+++++   W   I     N    E L LF  M + G R    T  S+L+
Sbjct: 317 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 376

Query: 400 ICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVIS 459
           +C++L +L  G+Q H  +++  F   V V++ ++TMY +CG +  + + F    ++D+I 
Sbjct: 377 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 436

Query: 460 WNSIICGFAHHGNGKEALEMIEKMRLA-NIEPNHITFIGVLSACSHKGLVEQGRYYFNLM 519
           WNSII G+A HG G+EAL++  +M L+ + +PN +TF+  LSACS+ G+VE+G   +  M
Sbjct: 437 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 471

Query: 520 KNECSIQPLSEH 531
           ++   ++P++ H
Sbjct: 497 ESVFGVKPITAH 471

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot
Match: Q9FXB9 (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.2e-94
Identity = 167/481 (34.72%), Postives = 278/481 (57.80%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           +FEIS   R G + EA+K FD +  + + +WNS++ GYF NG           +P+    
Sbjct: 21  SFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNG-----------LPK---- 80

Query: 110 SYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKD 169
                           +A+++FD M  R+VVSWN +++GY++N ++ +A  +F+ MP ++
Sbjct: 81  ----------------EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 140

Query: 170 VISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPM 229
           V+SW  ++ G +  G +  AE  F +M  R+ VSWT+M  GL   GR+DKARKL++ MP+
Sbjct: 141 VVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV 200

Query: 230 KDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEM 289
           KD  A   M+ G    G+++ A  +F++M ERN  +W  ++ G   + RVD AR+LF  M
Sbjct: 201 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 260

Query: 290 PEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFE 349
           PEK + +W +++L Y  +G +++     E  P   +++   +IVG+  +GE+  A ++F+
Sbjct: 261 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 320

Query: 350 SIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQL 409
            ++D+D   W   I          E L LF +M + G R    +  S+L++C+ L +LQ 
Sbjct: 321 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQY 380

Query: 410 GRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAH 469
           GRQ H  +++  F D V V++ ++TMY +CG +  A + F   S++D+I WNSII G+A 
Sbjct: 381 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 440

Query: 470 HGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSE 529
           HG G+EAL++  +M  +   PN +T I +L+ACS+ G +E+G   F  M+++  + P  E
Sbjct: 441 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 470

Query: 530 H 531
           H
Sbjct: 501 H 470

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.8e-92
Identity = 174/482 (36.10%), Postives = 279/482 (57.88%), Query Frame = 0


Query: 53  ISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPER-DIFSY 112
           I    + G + EA+KLFD +P+R+VVTW  +I GY   G   +   LF R+  R ++ ++
Sbjct: 53  IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112

Query: 113 NTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVI 172
             +++G ++   +  A+ +F  MP R+VVSWN+MI GY ++G ++KA++LFDEMP ++++
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172

Query: 173 SWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKD 232
           SWN ++  LV  G++D A   F +M RRD+VSWT M+ GLA+ G+VD+AR+LF+ MP ++
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232

Query: 233 DRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPE 292
             +WNAM+ GY +N +I+ A++LF+ MPER+F SWN ++ G + ++ ++ A  LF  MPE
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE 292

Query: 293 KCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESI 352
           K                               N++SWT +I GY                
Sbjct: 293 K-------------------------------NVISWTTMITGYV--------------- 352

Query: 353 QDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGP-RLDKATFTSVLTICSNLEALQLG 412
                           EN   EE L +F++M+R G  + +  T+ S+L+ CS+L  L  G
Sbjct: 353 ----------------ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 412

Query: 413 RQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRS--MSNRDVISWNSIICGFA 472
           +Q H L+ K+       V++A++ MY++ G +  A   F +  +  RD+ISWNS+I  +A
Sbjct: 413 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 472

Query: 473 HHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLS 531
           HHG+GKEA+EM  +MR    +P+ +T++ +L ACSH GLVE+G  +F  +  + S+    
Sbjct: 473 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 472

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot
Match: O04590 (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.0e-88
Identity = 171/506 (33.79%), Postives = 286/506 (56.52%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           N E++  +R+G + EA+ +F+++  RN VTWN+MI GY      +    LF  MP+RD+ 
Sbjct: 44  NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103

Query: 110 SYNTVIAGLMQCGDV---DDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP 169
           ++NT+I+G + CG +   ++A+++FD MP RD  SWN+MI+GY +N  + +A+ LF++MP
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163

Query: 170 LKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFEN 229
            ++ +SW+ +I G    G++D+A   F KM  +D      +++GL +  R+ +A  +   
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223

Query: 230 ----MPMKDD--RAWNAMMAGYIENGQIEMAEELFEKMPE---------------RNFDS 289
               +  ++D   A+N ++ GY + GQ+E A  LF+++P+               +N  S
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283

Query: 290 WNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNI 349
           WN ++   +    V  AR LF +M ++   +WN ++  Y+    +++   +  + P  + 
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343

Query: 350 VSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRL 409
            SW  ++ GY  +G V +A   FE   +K    WN+ I    +N   +E + LF RM   
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403

Query: 410 GPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCA 469
           G + D  T TS+L+  + L  L+LG Q H +V+K    D V V NA++TMY+RCG +  +
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMES 463

Query: 470 LMEFRSMS-NRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSH 529
              F  M   R+VI+WN++I G+A HGN  EAL +   M+   I P+HITF+ VL+AC+H
Sbjct: 464 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 523

Query: 530 KGLVEQGRYYFNLMKNECSIQPLSEH 531
            GLV++ +  F  M +   I+P  EH
Sbjct: 524 AGLVDEAKAQFVSMMSVYKIEPQMEH 548

[Close]

BLAST of Csor.00g254030.m01 vs. NCBI nr
Match: KAG6597333.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1096 bits (2835), Expect = 0.0
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG
Sbjct: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL
Sbjct: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA
Sbjct: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHIRA 533
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHIRA
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHIRA 533

[Close]

BLAST of Csor.00g254030.m01 vs. NCBI nr
Match: KAG7028799.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1089 bits (2816), Expect = 0.0
Identity = 529/530 (99.81%), Postives = 529/530 (99.81%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL
Sbjct: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA
Sbjct: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. NCBI nr
Match: XP_023538642.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1068 bits (2763), Expect = 0.0
Identity = 519/530 (97.92%), Postives = 526/530 (99.25%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVARSSFALRPTWIFSLYRRTSILLSTST CLQARHAPPTFSNLKPLN EISSCMRNG
Sbjct: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTSCLQARHAPPTFSNLKPLNSEISSCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEMPQRNVVTWN+MIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAK+IFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL
Sbjct: 121 CGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLD+AE YFGKMNRRDLVSWTIMISGLARAGRV+KARKLFENMPMKDDRAWNAMMA
Sbjct: 181 VNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRV+DARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMI+LGP LDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIKLGPCLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMS+RDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSSRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. NCBI nr
Match: XP_022937344.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata])

HSP 1 Score: 1066 bits (2757), Expect = 0.0
Identity = 520/530 (98.11%), Postives = 524/530 (98.87%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LV+EAQKLFDEMPQRNVVTWNSMIRGYFLNG  SDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVKEAQKLFDEMPQRNVVTWNSMIRGYFLNGRRSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP KDVISWNLIIGGL
Sbjct: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPSKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGR+DKARKLFENMPMKDDRAWNAMMA
Sbjct: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRLDKARKLFENMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAY+RNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYMRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEE LKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEESLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. NCBI nr
Match: XP_022974531.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])

HSP 1 Score: 1058 bits (2737), Expect = 0.0
Identity = 517/530 (97.55%), Postives = 523/530 (98.68%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTST CLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTSCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNG  SDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGRRSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAK+IFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP KDVISWNLIIGGL
Sbjct: 121 CGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPSKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNC KLD+AEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFE+MPMKDDRAWNAMMA
Sbjct: 181 VNCDKLDSAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFESMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLVK+THGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYIRNGLVKDTHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMS+RDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSSRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL
Match: A0A6J1FAX2 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata OX=3662 GN=LOC111443659 PE=4 SV=1)

HSP 1 Score: 1066 bits (2757), Expect = 0.0
Identity = 520/530 (98.11%), Postives = 524/530 (98.87%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LV+EAQKLFDEMPQRNVVTWNSMIRGYFLNG  SDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVKEAQKLFDEMPQRNVVTWNSMIRGYFLNGRRSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP KDVISWNLIIGGL
Sbjct: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPSKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGR+DKARKLFENMPMKDDRAWNAMMA
Sbjct: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRLDKARKLFENMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAY+RNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYMRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEE LKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEESLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL
Match: A0A6J1IBL8 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima OX=3661 GN=LOC111473202 PE=4 SV=1)

HSP 1 Score: 1058 bits (2737), Expect = 0.0
Identity = 517/530 (97.55%), Postives = 523/530 (98.68%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTST CLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTSCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNG  SDGISLFRRMPERDIFSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGRRSDGISLFRRMPERDIFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVDDAK+IFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP KDVISWNLIIGGL
Sbjct: 121 CGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPSKDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNC KLD+AEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFE+MPMKDDRAWNAMMA
Sbjct: 181 VNCDKLDSAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFESMPMKDDRAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI
Sbjct: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLVK+THGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN
Sbjct: 301 VLAYIRNGLVKDTHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMS+RDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSSRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL
Match: A0A6J1DVX0 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111024559 PE=4 SV=1)

HSP 1 Score: 929 bits (2401), Expect = 0.0
Identity = 447/530 (84.34%), Postives = 481/530 (90.75%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           M FVAR S  LRPTW FSL+ RTSI L+TST CLQ+RH P +F NLKPLN EIS+CMRNG
Sbjct: 1   MIFVARPSLVLRPTWSFSLHLRTSISLATSTSCLQSRHTPASFLNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVEEAQKLFDEM QRNVVTWN+MIRGYFLNG   D ISLFRRMPERD+FSYNTVIAGLMQ
Sbjct: 61  LVEEAQKLFDEMAQRNVVTWNAMIRGYFLNGRRGDAISLFRRMPERDVFSYNTVIAGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVD AK++F VMPF DVVSWNSMIAGY+RN LLE A+QLFD+MPL+DVISWNLIIGGL
Sbjct: 121 CGDVDGAKDVFAVMPFGDVVSWNSMIAGYIRNELLEAAVQLFDKMPLRDVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCG+LD AEEYF +M+RRDLVSWTIMISGLARAGR+D+AR+LFENMP+KD RAWNAMMA
Sbjct: 181 VNCGRLDLAEEYFNRMSRRDLVSWTIMISGLARAGRIDEARELFENMPVKDARAWNAMMA 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIEN QI+ AEELFEKMPERNFDSWN LVNGLVGSQRVDDARRLFM+MPEKCQKTWN+I
Sbjct: 241 GYIENDQIKEAEELFEKMPERNFDSWNDLVNGLVGSQRVDDARRLFMDMPEKCQKTWNSI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIR GLVKETH  LEKTPYGNIVSWTNLIVGYFGIGEVG+AVKIFESI  KDAT+WN
Sbjct: 301 VLAYIRKGLVKETHAFLEKTPYGNIVSWTNLIVGYFGIGEVGMAVKIFESILYKDATVWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGEND+GEEGLKLFTRMIRLGP  DKATFTSVLTICS LE LQLG+Q H LV+KA
Sbjct: 361 ATIFGLGENDQGEEGLKLFTRMIRLGPHPDKATFTSVLTICSGLETLQLGKQTHALVLKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAMVTMYARCGNMDCAL+EF SMS RDVISWNSIICGFA HGNG EALEM 
Sbjct: 421 GFNGFVAVSNAMVTMYARCGNMDCALIEFSSMSTRDVISWNSIICGFAQHGNGNEALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLAN+EPNHITFIGVLSACSH GLV+QGR+YFN MKN CSIQPLSEH
Sbjct: 481 EKMRLANVEPNHITFIGVLSACSHNGLVDQGRHYFNFMKNMCSIQPLSEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL
Match: A0A0A0L9N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134600 PE=4 SV=1)

HSP 1 Score: 921 bits (2381), Expect = 0.0
Identity = 438/530 (82.64%), Postives = 479/530 (90.38%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MF  AR SFALRPTWIFSLY R S  L+TST  LQA HAPPTF NLK LN EIS+CMRNG
Sbjct: 1   MFLFARPSFALRPTWIFSLYLRNSCSLTTSTCRLQASHAPPTFPNLKLLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVE+AQKLFD MPQRN+VTWN+MIRGYFLNG CSDGISLFRRMPERD+FSYNTVI GLMQ
Sbjct: 61  LVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIGGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVD AK+IFD+MPFRDVVSWNSMIAG +RNGLLE+AIQLFD MPLK+VISWNLIIGGL
Sbjct: 121 CGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VNCGKLD+A EYFGKM+RRDLVSWTIMISGL RAGR+D+AR LF NMP KD R WNAMM 
Sbjct: 181 VNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWNAMMV 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENG+IEMAEELF  MPERNF SWN LVNG VGSQRVDDAR+LFMEMP+KCQKTWNNI
Sbjct: 241 GYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLAYIRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFES+Q KD T+WN
Sbjct: 301 VLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDTTVWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGEND+GEEGLKLFTRMIRLGP LDKATFTS+LTICS+LE LQLGRQ H L++K 
Sbjct: 361 ATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKE 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAM+ MYARCGNMDCA MEF SMS+RDVISWNS+ICGFAHHGNG++ALEM 
Sbjct: 421 GFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKMRLANIEPNHITFIGVLSACSHKGL+++GRYYFN MKNECS++PL EH
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL
Match: A0A5D3D160 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002070 PE=4 SV=1)

HSP 1 Score: 905 bits (2340), Expect = 0.0
Identity = 432/530 (81.51%), Postives = 475/530 (89.62%), Query Frame = 0


Query: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MF +AR SFALRP WIFSLY R S  L+TST  LQA HA PTF NLK LN +IS+CMRNG
Sbjct: 1   MFLLARPSFALRPKWIFSLYLRNSCSLTTSTCRLQASHATPTFPNLKLLNSDISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQ 120
           LVE+AQ+LFDEMPQRNVVTWN+MIRGYFLNG CSDGISLFRRMPERD+FSYNTVI GLMQ
Sbjct: 61  LVEQAQRLFDEMPQRNVVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVICGLMQ 120

Query: 121 CGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGL 180
           CGDVD AK+IFDVMPFRDVVSWNSMIAG +RNGLLE+AIQLF  MPLK+VISWNLIIGGL
Sbjct: 121 CGDVDGAKDIFDVMPFRDVVSWNSMIAGCIRNGLLEEAIQLFYGMPLKNVISWNLIIGGL 180

Query: 181 VNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMA 240
           VN GKLD+A EYFGKM+RRDLVSWTIMISGL+RAGR+D+AR LF NMP KD R WN MM 
Sbjct: 181 VNSGKLDSAGEYFGKMSRRDLVSWTIMISGLSRAGRIDEARGLFNNMPTKDARVWNVMMV 240

Query: 241 GYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNI 300
           GYIENG+IEMAEELF  MPERNFDSW+ LVNG VGS+R DDAR+LFMEMP+KCQKTWNNI
Sbjct: 241 GYIENGKIEMAEELFRIMPERNFDSWDNLVNGFVGSRRFDDARKLFMEMPDKCQKTWNNI 300

Query: 301 VLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWN 360
           VLA IRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFE +Q KD T+WN
Sbjct: 301 VLANIRNGLVLQTHALLEKVPYGNIASWTNLIVGYFGIGEVGVAVEIFELMQYKDTTMWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGEND GEEGLKLFTRMIRLGPRLDKATFTSVLTICS+LE LQLGRQ H L++K 
Sbjct: 361 ATIFGLGENDEGEEGLKLFTRMIRLGPRLDKATFTSVLTICSDLETLQLGRQTHALILKE 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAM+ MYARCGNMDCA MEF SMS+RDVISWNSIICGFAHHGNG++ALEM 
Sbjct: 421 GFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSIICGFAHHGNGEDALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEH 530
           EKM+LANIEPNHITFIGVLSACSHKGLV++GRYYF+ MKNECS++PL EH
Sbjct: 481 EKMKLANIEPNHITFIGVLSACSHKGLVDKGRYYFDFMKNECSLRPLIEH 530

[Close]

BLAST of Csor.00g254030.m01 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 406.0 bits (1042), Expect = 4.7e-113
Identity = 191/481 (39.71%), Postives = 297/481 (61.75%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           N  IS  +RNG  E A+KLFDEMP+R++V+WN MI+GY  N        LF  MPERD+ 
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 110 SYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKD 169
           S+NT+++G  Q G VDDA+ +FD MP ++ VSWN++++ YV+N  +E+A  LF       
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218

Query: 170 VISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPM 229
           ++SWN ++GG V   K+  A ++F  MN RD+VSW  +I+G A++G++D+AR+LF+  P+
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278

Query: 230 KDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEM 289
           +D   W AM++GYI+N  +E A ELF+KMPERN  SWN ++ G V  +R++ A+ LF  M
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338

Query: 290 PEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFE 349
           P +   TWN ++  Y + G + E   + +K P  + VSW  +I GY              
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY-------------- 398

Query: 350 SIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQL 409
                             ++    E L+LF +M R G RL++++F+S L+ C+++ AL+L
Sbjct: 399 -----------------SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 458

Query: 410 GRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAH 469
           G+Q HG ++K G+     V NA++ MY +CG+++ A   F+ M+ +D++SWN++I G++ 
Sbjct: 459 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 518

Query: 470 HGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSE 529
           HG G+ AL   E M+   ++P+  T + VLSACSH GLV++GR YF  M  +  + P S+
Sbjct: 519 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 548

Query: 530 H 531
           H
Sbjct: 579 H 548

[Close]

BLAST of Csor.00g254030.m01 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-95
Identity = 169/492 (34.35%), Postives = 291/492 (59.15%), Query Frame = 0


Query: 40  PPTFSNLKPLNFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISL 99
           PPT       N  I+   R G + EA+KLFD    +++ +WNSM+ GYF N         
Sbjct: 17  PPT------ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFAN--------- 76

Query: 100 FRRMPERDIFSYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAI 159
              MP                     DA+++FD MP R+++SWN +++GY++NG +++A 
Sbjct: 77  --LMPR--------------------DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEAR 136

Query: 160 QLFDEMPLKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDK 219
           ++FD MP ++V+SW  ++ G V+ GK+D AE  F KM  ++ VSWT+M+ G  + GR+D 
Sbjct: 137 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDD 196

Query: 220 ARKLFENMPMKDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRV 279
           A KL+E +P KD+ A  +M+ G  + G+++ A E+F++M ER+  +W  +V G   + RV
Sbjct: 197 ACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 256

Query: 280 DDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIG 339
           DDAR++F  MPEK + +W ++++ Y++NG +++   + E  P   +++   +I G    G
Sbjct: 257 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 316

Query: 340 EVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLT 399
           E+  A ++F+S+++++   W   I     N    E L LF  M + G R    T  S+L+
Sbjct: 317 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 376

Query: 400 ICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVIS 459
           +C++L +L  G+Q H  +++  F   V V++ ++TMY +CG +  + + F    ++D+I 
Sbjct: 377 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 436

Query: 460 WNSIICGFAHHGNGKEALEMIEKMRLA-NIEPNHITFIGVLSACSHKGLVEQGRYYFNLM 519
           WNSII G+A HG G+EAL++  +M L+ + +PN +TF+  LSACS+ G+VE+G   +  M
Sbjct: 437 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 471

Query: 520 KNECSIQPLSEH 531
           ++   ++P++ H
Sbjct: 497 ESVFGVKPITAH 471

[Close]

BLAST of Csor.00g254030.m01 vs. TAIR 10
Match: AT1G56690.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 4.4e-95
Identity = 167/481 (34.72%), Postives = 278/481 (57.80%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           +FEIS   R G + EA+K FD +  + + +WNS++ GYF NG           +P+    
Sbjct: 21  SFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNG-----------LPK---- 80

Query: 110 SYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKD 169
                           +A+++FD M  R+VVSWN +++GY++N ++ +A  +F+ MP ++
Sbjct: 81  ----------------EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 140

Query: 170 VISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPM 229
           V+SW  ++ G +  G +  AE  F +M  R+ VSWT+M  GL   GR+DKARKL++ MP+
Sbjct: 141 VVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV 200

Query: 230 KDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEM 289
           KD  A   M+ G    G+++ A  +F++M ERN  +W  ++ G   + RVD AR+LF  M
Sbjct: 201 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 260

Query: 290 PEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFE 349
           PEK + +W +++L Y  +G +++     E  P   +++   +IVG+  +GE+  A ++F+
Sbjct: 261 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 320

Query: 350 SIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQL 409
            ++D+D   W   I          E L LF +M + G R    +  S+L++C+ L +LQ 
Sbjct: 321 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQY 380

Query: 410 GRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAH 469
           GRQ H  +++  F D V V++ ++TMY +CG +  A + F   S++D+I WNSII G+A 
Sbjct: 381 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 440

Query: 470 HGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSE 529
           HG G+EAL++  +M  +   PN +T I +L+ACS+ G +E+G   F  M+++  + P  E
Sbjct: 441 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 470

Query: 530 H 531
           H
Sbjct: 501 H 470

[Close]

BLAST of Csor.00g254030.m01 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 4.2e-93
Identity = 174/482 (36.10%), Postives = 279/482 (57.88%), Query Frame = 0


Query: 53  ISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPER-DIFSY 112
           I    + G + EA+KLFD +P+R+VVTW  +I GY   G   +   LF R+  R ++ ++
Sbjct: 53  IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112

Query: 113 NTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVI 172
             +++G ++   +  A+ +F  MP R+VVSWN+MI GY ++G ++KA++LFDEMP ++++
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172

Query: 173 SWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKD 232
           SWN ++  LV  G++D A   F +M RRD+VSWT M+ GLA+ G+VD+AR+LF+ MP ++
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232

Query: 233 DRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPE 292
             +WNAM+ GY +N +I+ A++LF+ MPER+F SWN ++ G + ++ ++ A  LF  MPE
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE 292

Query: 293 KCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESI 352
           K                               N++SWT +I GY                
Sbjct: 293 K-------------------------------NVISWTTMITGYV--------------- 352

Query: 353 QDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGP-RLDKATFTSVLTICSNLEALQLG 412
                           EN   EE L +F++M+R G  + +  T+ S+L+ CS+L  L  G
Sbjct: 353 ----------------ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 412

Query: 413 RQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRS--MSNRDVISWNSIICGFA 472
           +Q H L+ K+       V++A++ MY++ G +  A   F +  +  RD+ISWNS+I  +A
Sbjct: 413 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 472

Query: 473 HHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLS 531
           HHG+GKEA+EM  +MR    +P+ +T++ +L ACSH GLVE+G  +F  +  + S+    
Sbjct: 473 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 472

[Close]

BLAST of Csor.00g254030.m01 vs. TAIR 10
Match: AT1G62260.1 (mitochondrial editing factor 9 )

HSP 1 Score: 328.9 bits (842), Expect = 7.3e-90
Identity = 171/506 (33.79%), Postives = 286/506 (56.52%), Query Frame = 0


Query: 50  NFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIF 109
           N E++  +R+G + EA+ +F+++  RN VTWN+MI GY      +    LF  MP+RD+ 
Sbjct: 44  NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103

Query: 110 SYNTVIAGLMQCGDV---DDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMP 169
           ++NT+I+G + CG +   ++A+++FD MP RD  SWN+MI+GY +N  + +A+ LF++MP
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163

Query: 170 LKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFEN 229
            ++ +SW+ +I G    G++D+A   F KM  +D      +++GL +  R+ +A  +   
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223

Query: 230 ----MPMKDD--RAWNAMMAGYIENGQIEMAEELFEKMPE---------------RNFDS 289
               +  ++D   A+N ++ GY + GQ+E A  LF+++P+               +N  S
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283

Query: 290 WNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNI 349
           WN ++   +    V  AR LF +M ++   +WN ++  Y+    +++   +  + P  + 
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343

Query: 350 VSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRL 409
            SW  ++ GY  +G V +A   FE   +K    WN+ I    +N   +E + LF RM   
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403

Query: 410 GPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCA 469
           G + D  T TS+L+  + L  L+LG Q H +V+K    D V V NA++TMY+RCG +  +
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMES 463

Query: 470 LMEFRSMS-NRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSH 529
              F  M   R+VI+WN++I G+A HGN  EAL +   M+   I P+HITF+ VL+AC+H
Sbjct: 464 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 523

Query: 530 KGLVEQGRYYFNLMKNECSIQPLSEH 531
            GLV++ +  F  M +   I+P  EH
Sbjct: 524 AGLVDEAKAQFVSMMSVYKIEPQMEH 548

The following BLAST results are available for this feature:

BLAST of Csor.00g254030.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY02	6.6e-112	39.71	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q56XI1	2.8e-94	34.35	Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop...	[more]
Q9FXB9	6.2e-94	34.72	Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop...	[more]
O64766	5.8e-92	36.10	Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop...	[more]
O04590	1.0e-88	33.79	Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop...	[more]

BLAST of Csor.00g254030.m01 vs. NCBI nr


Match Name	Identity	Description
KAG6597333.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7028799.1	99.81	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023538642.1	97.92	pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp...	[more]
XP_022937344.1	98.11	pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata]	[more]
XP_022974531.1	97.55	pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima]	[more]

BLAST of Csor.00g254030.m01 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FAX2	98.11	pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata...	[more]
A0A6J1IBL8	97.55	pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima O...	[more]
A0A6J1DVX0	84.34	pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charanti...	[more]
A0A0A0L9N2	82.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134600 PE=4 SV=1	[more]
A0A5D3D160	81.51	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Csor.00g254030.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02750.1	4.7e-113	39.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09410.1	2.0e-95	34.35	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G56690.1	4.4e-95	34.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G35030.1	4.2e-93	36.10	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62260.1	7.3e-90	33.79	mitochondrial editing factor 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 409..532 e-value: 2.1E-22 score: 81.9 coord: 200..319 e-value: 8.1E-25 score: 89.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 49..120 e-value: 2.0E-17 score: 65.1 coord: 121..199 e-value: 2.4E-22 score: 81.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 320..408 e-value: 1.4E-11 score: 46.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 212..395
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 168..267
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 109..135 e-value: 2.2E-5 score: 24.4 coord: 53..77 e-value: 6.3E-5 score: 23.0 coord: 78..108 e-value: 1.9E-7 score: 30.9 coord: 234..263 e-value: 8.8E-8 score: 31.9 coord: 140..168 e-value: 6.0E-10 score: 38.7 coord: 265..292 e-value: 0.0096 score: 16.1 coord: 358..386 e-value: 0.0072 score: 16.5 coord: 326..354 e-value: 0.72 score: 10.2
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 200..227 e-value: 3.0E-8 score: 33.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 234..263 e-value: 8.4E-7 score: 26.8 coord: 140..166 e-value: 3.0E-8 score: 31.3 coord: 78..108 e-value: 5.1E-6 score: 24.3 coord: 265..291 e-value: 6.4E-4 score: 17.7 coord: 458..491 e-value: 1.7E-7 score: 29.0 coord: 171..201 e-value: 2.3E-4 score: 19.1 coord: 202..227 e-value: 8.7E-8 score: 29.9 coord: 109..139 e-value: 6.0E-6 score: 24.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 455..503 e-value: 2.0E-10 score: 40.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 231..265 score: 11.673842
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 200..230 score: 10.972319
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 8.933517
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 11.629997
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 76..110 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..172 score: 12.309597
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 254..313
None	No IPR available	PANTHER	PTHR47925:SF94	SUBFAMILY NOT NAMED	coord: 254..313
None	No IPR available	PANTHER	PTHR47925:SF94	SUBFAMILY NOT NAMED	coord: 317..531 coord: 25..256
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 317..531 coord: 25..256

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g254030	Csor.00g254030	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254030.m01.CDS01	Csor.00g254030.m01.CDS01	CDS

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254030.m01.single01	Csor.00g254030.m01.single01	single

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254030.m01.start_codon01	Csor.00g254030.m01.start_codon01	start_codon

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g254030.m01.stop_codon01	Csor.00g254030.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g254030.m01	Csor.00g254030.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding