Csor.00g252030.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g252030.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Dynein light chain
Location	Csor_Chr06: 10423262 .. 10423733 (+)
Sequence length	372
RNA-Seq Expression	Csor.00g252030.m01
Synteny	Csor.00g252030.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCACGACTCCAAGCGAAGCAATCCTTCTCCTCTAATGGTCAAGCCTGAATCTGAGGATCGCAAACCCTCCTCTGCTGCTCCTGTCGGCAAGAAAATCGTCATCAAGAGCGCTGATATGTTCGGAGACATGCAGAAGGAGGCTGTCGACATTGCCATAGCCGTTAGTGATTCTTTCTCTTGAAATAACTACTCATAATCTCTTAGAAAATCTGTTCCTTAAGTAATTACGTCAGAATCTGTTTTGTTTTATTGTTGTTTAGGCATTTGAGAAGCATTCCGTCGAGAAGGATGTCGCCGAGCAGATTAAGAAGGAGTTCGATAAGCGGCATGGTCCGACCTGGCATTGCGTCATCGGTCGTAATTTTGGTAGCGTATTTCACTCTCTCTGTGAATCTCTAGCTTCTTGGTTAATTTTCCCTTTATCTCAGTCTGATGGATCAAATCGTCATGAATTTCTGTTGCTTTAG

mRNA sequence

ATGAACCACGACTCCAAGCGAAGCAATCCTTCTCCTCTAATGGTCAAGCCTGAATCTGAGGATCGCAAACCCTCCTCTGCTGCTCCTGTCGGCAAGAAAATCGTCATCAAGAGCGCTGATATGTTCGGAGACATGCAGAAGGAGGCTGTCGACATTGCCATAGCCGCATTTGAGAAGCATTCCGTCGAGAAGGATGTCGCCGAGCAGATTAAGAAGGAGTTCGATAAGCGGCATGGTCCGACCTGGCATTGCGTCATCGGTCGTAATTTTGGTAGCGTATTTCACTCTCTCTGTGAATCTCTAGCTTCTTGGTTAATTTTCCCTTTATCTCAGTCTGATGGATCAAATCGTCATGAATTTCTGTTGCTTTAG

Coding sequence (CDS)

ATGAACCACGACTCCAAGCGAAGCAATCCTTCTCCTCTAATGGTCAAGCCTGAATCTGAGGATCGCAAACCCTCCTCTGCTGCTCCTGTCGGCAAGAAAATCGTCATCAAGAGCGCTGATATGTTCGGAGACATGCAGAAGGAGGCTGTCGACATTGCCATAGCCGCATTTGAGAAGCATTCCGTCGAGAAGGATGTCGCCGAGCAGATTAAGAAGGAGTTCGATAAGCGGCATGGTCCGACCTGGCATTGCGTCATCGGTCGTAATTTTGGTAGCGTATTTCACTCTCTCTGTGAATCTCTAGCTTCTTGGTTAATTTTCCCTTTATCTCAGTCTGATGGATCAAATCGTCATGAATTTCTGTTGCTTTAG

Protein sequence

MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESLASWLIFPLSQSDGSNRHEFLLL

Homology

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.4e-18
Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 30 VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRN 89
          V +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK++ PTWHC++GRN
Sbjct: 2  VDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 90 FGS 93
          FGS
Sbjct: 62 FGS 64

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFG 91
          +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHC++GRNFG
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92 S 93
          S
Sbjct: 64 S 64

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFG 91
          +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHC++GRNFG
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92 S 93
          S
Sbjct: 64 S 64

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFG 91
          +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHC++GRNFG
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92 S 93
          S
Sbjct: 64 S 64

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 32 KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFG 91
          +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHC++GRNFG
Sbjct: 4  RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92 S 93
          S
Sbjct: 64 S 64

[Close]

BLAST of Csor.00g252030.m01 vs. NCBI nr
Match: KAG6597532.1 (Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249 bits (636), Expect = 2.32e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
           MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESLASWLIFPLSQSDGSNRHEF 120
           SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESLASWLIFPLSQSDGSNRHEF
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESLASWLIFPLSQSDGSNRHEF 120

Query: 121 LLL 123
           LLL
Sbjct: 121 LLL 123

[Close]

BLAST of Csor.00g252030.m01 vs. NCBI nr
Match: KAG7028990.1 (Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194 bits (494), Expect = 4.59e-62
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSL 97
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSL
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSL 97

[Close]

BLAST of Csor.00g252030.m01 vs. NCBI nr
Match: XP_022945423.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 184 bits (468), Expect = 7.97e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92

[Close]

BLAST of Csor.00g252030.m01 vs. NCBI nr
Match: XP_022973755.1 (dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 177 bits (450), Expect = 4.27e-55
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPS LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 91

[Close]

BLAST of Csor.00g252030.m01 vs. NCBI nr
Match: XP_022973756.1 (dynein light chain 1, cytoplasmic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 174 bits (440), Expect = 6.95e-54
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPS LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 90
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 89

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 3.86e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL
Match: A0A6J1IC60 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 177 bits (450), Expect = 2.07e-55
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPS LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 91

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL
Match: A0A6J1I9I2 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 174 bits (440), Expect = 3.37e-54
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MNHDSKRSNPS LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH
Sbjct: 1  MNHDSKRSNPS-LMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 90
          SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF
Sbjct: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNF 89

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL
Match: A0A6J1C8U0 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.87e-49
Identity = 77/92 (83.70%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
          MN D+KR+NP+ LMVKPESEDRKPSSA P+ +K+VIKSADMFGDMQKEAVDIAIAAFEK+
Sbjct: 1  MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60

Query: 61 SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
          +VEKDVAEQIK+EFDKRHGPTWHC++GRNFGS
Sbjct: 61 AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGS 92

[Close]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL
Match: A0A6J1IQ69 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 6.39e-49
Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60
           MN +SKRSNP+PLMVKPESEDRK SS A   KKIVIKSADMFG MQKEAVDIAIAAFEKH
Sbjct: 29  MNQESKRSNPNPLMVKPESEDRKASSVAAAAKKIVIKSADMFGHMQKEAVDIAIAAFEKH 88

Query: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 92
           SVEKDVAEQIKKEFD+RHGPTWHC++GRNFGS
Sbjct: 89  SVEKDVAEQIKKEFDQRHGPTWHCIVGRNFGS 120

[Close]

BLAST of Csor.00g252030.m01 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-24
Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 20 EDRKPS-----SAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEF 79
          +DR+ S     ++ P GK+ VIKSADM  DMQKEA++IAI+AFEK+SVEKD+AE IKKEF
Sbjct: 21 DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEF 80

Query: 80 DKRHGPTWHCVIGRNFGS 93
          DK+HG TWHC++GRNFGS
Sbjct: 81 DKKHGATWHCIVGRNFGS 98

[Close]

BLAST of Csor.00g252030.m01 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 36  IKSADMFGDMQKEAVDIA---IAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGS 95
           I +ADM G MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHC++G +FGS
Sbjct: 119 ILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSSFGS 178

Query: 96  -VFHS 97
            V HS
Sbjct: 179 FVTHS 182

[Close]

BLAST of Csor.00g252030.m01 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAVDIAIAAFEKHSVE--KDVAEQIKKEFDKRHGPTWHCVIGRNF 92
          K +++ +DM   MQ +A+  A  A +   V   K +A  IKKEFD+R+G  W CV+G NF
Sbjct: 5  KAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNF 64

Query: 93 GSVF 95
          G  F
Sbjct: 65 GCFF 68

[Close]

BLAST of Csor.00g252030.m01 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAVDIAIAAFEKHSV--EKDVAEQIKKEFDKRHGPTWHCVIGRNF 92
          K  ++  DM   MQ +A+ IA  + +   V     +A  IKKEFD+R+G  W CV+G NF
Sbjct: 5  KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNF 64

Query: 93 GSVF 95
          G  F
Sbjct: 65 GCFF 68

[Close]

BLAST of Csor.00g252030.m01 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 33 KIVIKSADMFGDMQKEAVDIAIAAFEKHSVEK--DVAEQIKKEFDKRHGPTWHCVIGRNF 92
          K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+ +G  W C++G +F
Sbjct: 5  KAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHF 64

The following BLAST results are available for this feature:

BLAST of Csor.00g252030.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	8.4e-18	61.90	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	1.9e-17	63.93	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	1.9e-17	63.93	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	1.9e-17	63.93	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	1.9e-17	63.93	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]

BLAST of Csor.00g252030.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597532.1	2.32e-83	100.00	Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028990.1	4.59e-62	100.00	Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945423.1	7.97e-58	100.00	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
XP_022973755.1	4.27e-55	98.91	dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]	[more]
XP_022973756.1	6.95e-54	98.89	dynein light chain 1, cytoplasmic-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g252030.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0U9	3.86e-58	100.00	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1IC60	2.07e-55	98.91	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1I9I2	3.37e-54	98.89	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1C8U0	1.87e-49	83.70	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1	[more]
A0A6J1IQ69	6.39e-49	86.96	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1	[more]

BLAST of Csor.00g252030.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	1.6e-24	66.67	Dynein light chain type 1 family protein	[more]
AT5G20110.1	1.4e-07	49.23	Dynein light chain type 1 family protein	[more]
AT1G52240.2	5.2e-07	42.19	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	2.6e-06	40.63	Dynein light chain type 1 family protein	[more]
AT4G27360.1	2.2e-05	37.10	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 29..112 e-value: 6.9E-28 score: 108.7
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 33..95 e-value: 2.0E-23 score: 82.6
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 18..93
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 30..107 e-value: 5.4E-26 score: 92.6
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 31..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR11886:SF95	DYNEIN LIGHT CHAIN	coord: 18..93

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g252030	Csor.00g252030	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.CDS02	Csor.00g252030.m01.CDS02	CDS
Csor.00g252030.m01.CDS01	Csor.00g252030.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.initial01	Csor.00g252030.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.start_codon01	Csor.00g252030.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.intron01	Csor.00g252030.m01.intron01	intron

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.terminal01	Csor.00g252030.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01.stop_codon01	Csor.00g252030.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g252030.m01	Csor.00g252030.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule