Csor.00g243530.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g243530.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4
Location	Csor_Chr16: 2171241 .. 2172521 (+)
Sequence length	489
RNA-Seq Expression	Csor.00g243530.m01
Synteny	Csor.00g243530.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACCAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGGTCGGTCATCTCCTTTCATTTATGCCTCCGACTTGTTAATTTCTGTTTTTAAGATCCTGATTTGTTCTTAAACCCTGTTAATATGATGGATAACAGAGAAACCACGAGGAAAGGTAAGCTTTTTCTCTTTCTAATTTTAAATAAGGCTTTCCACAATGGGTATTGTTGAGTTGAATTGAGAAGAGATCGTATGGTTAGGATTCACGATCCTCCACGGTGGTACGATGGCTTTGCTTTTGGCTTCCCCAAAAGGCCTCATATCAATGGAGATATATTCCTTACTCATAACCTCATGATCAACCGTTTAATTAGCCAATGTGGGACTCTCTCCCAACAATCCTCCCCTCGGACAAAATACAATATAGAGCCTCTCTTGAGGCTTATGGAGTCCTCGAACAGCCTCCCCTTAATCAAGGTTCGACTCGTTCTCTGGAGCCTTCAAACAAAGTACAATCTTTATTTGACACTTGAGTCACTTTTGTCTACACTTTCGAGGGTCTCAACTTCTTTGTTCGACATTTGAGAATTCTATTGACATGGCTAAGTTAAGGGCATACCTCTAATACCATGTTAGGAATCACGACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATGAGCTCTCACGGCTTTGCTTTTGGCTTCCCCAAAAGCCTCATACCAATGGAGATATATTCTTTACTTATAAATCCATGATCTACCCCTTAATGAGACTCCCTCCCAACAAAACACAGACAAAAATAAATCCAAATCATGCTTCTCTGTTCTAGTATTTTTCCAAAACAAGTTGACTTATTTTCTTGTAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAAGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA

mRNA sequence

ATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACCAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGAGAAACCACGAGGAAAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAAGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA

Coding sequence (CDS)

ATGAGAAGTGCATATAGAAGTGTAATGTTTTATATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATCGTGGCTCAATGCCGACAGAAATGTGAGGTTATACAAGAAAAGTTCACCGAGAAACTGGAGCAGGTGCATGCTGCATACCAAAAAATGGCCAAAAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACCAGAGCTACAGGAGAAGTTTGCTGAAAAATCCAGAGAAACCACGAGGAAAGACTGGCTGGTTTCCGCTCCTGAAACTCCAGGGCCAAGAGAAGACATATGGCCGGCAAAACAAGCTGCTCCAATGGCAATGGAAGCTGGGAACAGAGGAGCTGGAGCTCACTCCGCGTCTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTACGCAACTTCATTTTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACGTAA

Protein sequence

MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKPELQEKFAEKSRETTRKDWLVSAPETPGPREDIWPAKQAAPMAMEAGNRGAGAHSASGSGAGNPSMTLRNFILSPIKRPQLSRRPQMFT

Homology

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy Swiss-Prot
Match: F4HRI2 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=HEI10 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-43
Identity = 113/229 (49.34%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +Q KF+EK+EQVH AYQKM KRCQ
Sbjct: 75  MKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTAYQKMGKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKS------------------------------------ 120
           MME+E+ENL+KDK ELQEKF+EKS                                    
Sbjct: 135 MMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRTAIQPANNFYPRHQ 194

Query: 121 ---------------RETTRKDWLVSAPETPGPREDIWPAKQ-------------AAPMA 163
                          RET RKD    +P TPGP+++IWPA+Q             +  + 
Sbjct: 195 EPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSNSGPFDISTDSPAIP 254

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy Swiss-Prot
Match: I6PL68 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 4.6e-40
Identity = 110/232 (47.41%), Postives = 132/232 (56.90%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFYIGQKELEMQYKMNRIV QCRQKCE++Q KFTEKLE+VH AYQKMAK+CQ
Sbjct: 75  MKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLEEVHTAYQKMAKKCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSRETTRKD----------------------------- 120
           +ME+E+ENLS+DK ELQEKFAEKSR+  + D                             
Sbjct: 135 LMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKRSAIQPANNYFPRAQ 194

Query: 121 -------------------WLVSAPETPGPREDIW--PAKQ----AAPMAMEAGNRGAGA 163
                               L   PETPG R++ W  P +Q    + P  + A   G+ A
Sbjct: 195 PDLFSGVPNIMDSSDPLRQGLAGLPETPGRRDEGWAPPPRQRRSTSGPFELSA---GSPA 254

[Close]

BLAST of Csor.00g243530.m01 vs. NCBI nr
Match: KAG6577026.1 (E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311 bits (798), Expect = 8.49e-107
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ
Sbjct: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60

Query: 61  MMEREMENLSKDKPELQEKFAEKSRETTRKDWLVSAPETPGPREDIWPAKQAAPMAMEAG 120
           MMEREMENLSKDKPELQEKFAEKSRETTRKDWLVSAPETPGPREDIWPAKQAAPMAMEAG
Sbjct: 61  MMEREMENLSKDKPELQEKFAEKSRETTRKDWLVSAPETPGPREDIWPAKQAAPMAMEAG 120

Query: 121 NRGAGAHSASGSGAGNPSMTLRNFILSPIKRPQLSRRPQMFT 162
           NRGAGAHSASGSGAGNPSMTLRNFILSPIKRPQLSRRPQMFT
Sbjct: 121 NRGAGAHSASGSGAGNPSMTLRNFILSPIKRPQLSRRPQMFT 162

[Close]

BLAST of Csor.00g243530.m01 vs. NCBI nr
Match: XP_008451736.1 (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis melo])

HSP 1 Score: 253 bits (646), Expect = 1.31e-81
Identity = 147/229 (64.19%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. NCBI nr
Match: XP_031740265.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 1.31e-81
Identity = 148/229 (64.63%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYNGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E TRKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 SDLFSNPVNLMDNREATRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDISVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. NCBI nr
Match: XP_008451733.1 (PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 253 bits (646), Expect = 1.35e-81
Identity = 147/229 (64.19%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. NCBI nr
Match: XP_004137226.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus] >XP_011653295.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus] >XP_011653296.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus] >XP_011653297.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus] >XP_011653298.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 1.35e-81
Identity = 148/229 (64.63%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYNGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E TRKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 SDLFSNPVNLMDNREATRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDISVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL
Match: A0A1S3BTB4 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492939 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 6.33e-82
Identity = 147/229 (64.19%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL
Match: A0A1S3BSZ6 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492939 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 6.53e-82
Identity = 147/229 (64.19%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 195 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 254

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL
Match: A0A1S4DYU3 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492939 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.15e-81
Identity = 147/229 (64.19%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 93  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 152

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENLSKDK ELQEKFAEKSR                                   
Sbjct: 153 MMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 212

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 213 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 272

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL
Match: A0A5A7VBK3 (E3 ubiquitin-protein ligase CCNB1IP1-like protein isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001990 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.59e-81
Identity = 146/229 (63.76%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFY+GQKELEMQYKMNR++AQCRQKCEV+QEKFTEKLEQVH+AYQKMAKRCQ
Sbjct: 71  MKSAYRSVMFYVGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHSAYQKMAKRCQ 130

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMER+MENLSKDK ELQEKFAEKSR                                   
Sbjct: 131 MMERQMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVTNFYTRNE 190

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWP------------------AKQAA 162
                         E  RKDW+VSAPETPGPRE+IWP                  AKQAA
Sbjct: 191 PDLFSNPVNLMDNREAMRKDWMVSAPETPGPREEIWPTRQNSGNSGHFDLSVGSPAKQAA 250

[Close]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL
Match: A0A6J1CMM6 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012855 PE=4 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.31e-80
Identity = 147/230 (63.91%), Postives = 153/230 (66.52%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVH AYQKMAKRCQ
Sbjct: 75  MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKSR----------------------------------- 120
           MMEREMENL+KDK ELQEKFAEKSR                                   
Sbjct: 135 MMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKRSAIQPVSNFYPRNE 194

Query: 121 --------------ETTRKDWLVSAPETPGPREDIWPA-------------------KQA 162
                         E  RKDWLVSAPETPGPRE+IWPA                   KQA
Sbjct: 195 PDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSGGHFDISVGSPPKQA 254

[Close]

BLAST of Csor.00g243530.m01 vs. TAIR 10
Match: AT1G53490.1 (RING/U-box superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 113/229 (49.34%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 1   MRSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVIQEKFTEKLEQVHAAYQKMAKRCQ 60
           M+SAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +Q KF+EK+EQVH AYQKM KRCQ
Sbjct: 75  MKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTAYQKMGKRCQ 134

Query: 61  MMEREMENLSKDKPELQEKFAEKS------------------------------------ 120
           MME+E+ENL+KDK ELQEKF+EKS                                    
Sbjct: 135 MMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRTAIQPANNFYPRHQ 194

Query: 121 ---------------RETTRKDWLVSAPETPGPREDIWPAKQ-------------AAPMA 163
                          RET RKD    +P TPGP+++IWPA+Q             +  + 
Sbjct: 195 EPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSNSGPFDISTDSPAIP 254

The following BLAST results are available for this feature:

BLAST of Csor.00g243530.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRI2	2.0e-43	49.34	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
I6PL68	4.6e-40	47.41	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Csor.00g243530.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577026.1	8.49e-107	100.00	E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosper...	[more]
XP_008451736.1	1.31e-81	64.19	PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis melo...	[more]
XP_031740265.1	1.31e-81	64.63	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucumis sativus]	[more]
XP_008451733.1	1.35e-81	64.19	PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis melo...	[more]
XP_004137226.1	1.35e-81	64.63	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Cucumis sativus] >XP_01...	[more]

BLAST of Csor.00g243530.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BTB4	6.33e-82	64.19	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucumis melo OX=3656 ...	[more]
A0A1S3BSZ6	6.53e-82	64.19	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucumis melo OX=3656 ...	[more]
A0A1S4DYU3	1.15e-81	64.19	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7VBK3	1.59e-81	63.76	E3 ubiquitin-protein ligase CCNB1IP1-like protein isoform X4 OS=Cucumis melo var...	[more]
A0A6J1CMM6	4.31e-80	63.91	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Momordica charantia O...	[more]

BLAST of Csor.00g243530.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53490.1	1.4e-44	49.34	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..92
None	No IPR available	PANTHER	PTHR47384	E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG	coord: 85..162 coord: 1..87

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g243530	Csor.00g243530	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.CDS03	Csor.00g243530.m01.CDS03	CDS
Csor.00g243530.m01.CDS02	Csor.00g243530.m01.CDS02	CDS
Csor.00g243530.m01.CDS01	Csor.00g243530.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.initial01	Csor.00g243530.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.start_codon01	Csor.00g243530.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.intron02	Csor.00g243530.m01.intron02	intron
Csor.00g243530.m01.intron01	Csor.00g243530.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.internal01	Csor.00g243530.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.terminal01	Csor.00g243530.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01.stop_codon01	Csor.00g243530.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g243530.m01	Csor.00g243530.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035825	homologous recombination
biological_process	GO:0051321	meiotic cell cycle