Csor.00g234130.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g234130.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Mitochondrial pyruvate carrier
Location	Csor_Chr18: 4675980 .. 4681436 (-)
Sequence length	327
RNA-Seq Expression	Csor.00g234130.m01
Synteny	Csor.00g234130.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCAGTTAGTTTCTTCCATTTTTTCACAATCTATGCTTTAATTCTTGTTCTTGAGCGGTCAAATTCAAGTATGGTATCTCATTTTTTTCCTTTCGTCTTAGGTCAGAAGAATCTGGATCGCGAACGATCCATTTTCAATTTGATTGATTGCTTAAATTTTGCTCCGATGATCGTTGATTTTCAGATGCCAGATGATTTTATAGAATGATTAATGCAAAATCTAAAACGAGTATCTATCAACTATTAGTCAGTCAAATTGAAACTATATCGTGAATGATCTACATAATCCAATTACTTCGTATTTAGAATCCATAGGCTACGTTCTTTCTCGTGAATGATCTTAATTCAATATTTCTTCGGGTTGTGTTCTGCGCAATTGAAGGCGTAAGGACATCCCGAGCAGAGGAAAATATTGAGAGGAGGAAACTTCAGATAGTCCGCTCGGTAAGACTCACTAGATGTACTCGGACCCCGGGGCAACCTTTTTATGAATAGCTACCCCAATTAGAGCATCCCATAATACTATTTGATGAGCGGTGTAAGATGAGCTCAGTTCATGTTGGGCTCGACTAGCTATGGTGAAATATGTCCTTGTCTGGGTGAGCTAGCTCGTTGAGCCAAAGTCTCGTTAGATAGTTTTGGACAATTTTTTCCCACATCTGGGCTCTTATTTGCTTGTTTCTGCTTCATGATGAGGTTAACGTTACTAACTTCTTTTGGTTGTAGCGTGATAAATGGAATTTGTGTCTTTTGTCGAAATGGAATGCCTTATCTTTTTATTTTTTTCTTTTTTCCTTAATGGGTTAAGGGCGGGGGTTCCGTTATAAACTAAATATAGTATACCCATCCCAAATCAGCATATTTTTTTGTTTTACGCCCCGTAATTCTTCCTCAGCCAGGCTTCGACAGAATAGGAAAGCAAGTACAAGTATTAGTAGAATAGCAAAAATGTGTTCCTCATCATTAATATGTTTACTTGCGGTAATTGTGACCTCTCGGGAGAATCGATGACTGCATCAAGGATGCACTTGCTAGTACTAGTACATCTGAGAATTCTTAATTGGCTAGTTGTAAATAGACCCAAACTGTGGAACAAAGGATTATCCTAGACCTATACCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAAAATTTGATATGATGAGATGGAATGCAATAGAAACAAAGACACAGCCTCTTAATGCCCATTGCCCATCATTCTACAAGTTCTTTTCTTATAGGGCATTACCATAGGAACTGTAATTCTCTAGTTAGAATCTTTTTTCTCAAGAAATTTTCCCGGACTTTCGCATATTATTGCAGTGCCGGTACATCGGTCTTCATATTAATGATCTTCTACTCTTTCGTTTTCGATCAAGTAGTGTTAGTTTGTTTCAAGTGACTGCATAACTGGACTGAAGGAAACTTGTTTCTCCTCATCACTGTATAATGACCCCTTTTGTACTTCTTTCCAGATAAGAACATTGTTTGTTATTAGTAAATAAACAACAAAAACTATATCTCTTCCTTGTTTCTCATTTTATGGTTTCTTATTAGCTTCTCTAGAATTGACATATAATGGTTGTGATGATTACAAGGCTTCTTTGTTTTCAACTAAAATGAGCAATCAGCAGAGGATTTCTGTGAGCTAATTCCTCTTTGTAATACAGTTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGGTATGTGTTCTATAGCAAAGGTCATTCAAGCCATGTAAAGTTTGCACCTTCCCAGTTTTTCTCTTGCCCCTATCGTTTCACACGTGCACTCATATCGCAATTTTGAGAAGATTAGTAACTTAATTTTTGTTCCCTACTATTATGGTTTGATTTGTGTTCGAATAATTCCTTTATTAACGTTTTTTTCCCTCTTATCATATGCATCCAGCTGTTACAGCTACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGGTAAGTTAAAGAAATGACATGACTAATGATTGATGAAACATAAAGTGATAATAGTGTGACCATACGAATGACTTATATTTTGTAAAATATCACTATTTCGAAGAGTGTTGGGCTTTCACCTCGATTAGTTCTTCTAGCCTGCTTAAGCTAAATGTTCTCGGAAGTGGCTTTGGTAGCATTGAAGCATAAGACCTTGTCTTTGTCTTTTAACAAGAACCCACATAAGAAAGGGTGCAATCCTTGCTGTACTAAGTAGGGGAAGGATAGATTCATGTTGAAGCTTTGAAAGCTTTCCAGCATACATGGAGAGAAAAAGGACAGCTAGAGAAAGGATACCATCACTTTCACTTGTGTTTAAGGTTTGTTTAGTTTTTAATTTGATTCTAGGTGTGGCCATTTGAATCGGGAATTGCTATGAAATTTATCATAGTTCTTGAGACCACCTTTTAGAATGGTCTGCAAAAAAAACCTTTGCCTCCTAGGGAGATCTTGCTCTCCATAAAGCTTCGAGGATTCACCAGGAAGATTACTGGTGCCACTATGAAGTCCTTGAAAAGAAAACTTGCAAGAATAGGCACTTGATTTATCAAGAATCCTAACCCTTCTATCTTCATTAATGGTGAGAAGGCCACCATAAATTTTCTCCATCAGTTCCATCCAATCCTTCCACCTTCTAATCCAAAAGATTCCTCCCAAGTTCTCAGGAGTCTGAGTGGTTGGTCTTTACTATCTGTTCCCTCCTGAAAGAAGTCTTTCAATTGCTTATCTGGGTATTACCAAAAATCTCCTTTTTCCACGGTTTAAGTTTCTTTCTTAGGGCTTTAAAAGTTCCTCATGAGAGAAGATCCATTATCCAGGTCTCTGGAAGGAATTCCATGTATCCTCTTAACATGGTGAAGACAGAAGGATGCTTCAATCAGCAGTTTCCAAAATCGGAGGAGAAGGATAGGGAAGCAAGCCGTTGTCATTCTATCTAGCCAGTTCACTTTATCATCACAGTATTTCCCCACCCATTCCTTACAGATGAGAAGTTGGTCATGCATACATGGCTGCACTTCTGACATTTGAACTTGTAAAACGCCCCTTCCTAGGACAGAGATCAATGAGAGGTAGATCATTCATCACTCGGTAAATTTTGTGATGGTGGAGGAGGTGCTTTTCCATCCCTTCATTTTGTGATATGGGATGGGTCTTTTTTGATGCTCTGCTGTATTTGCTGTTTTTTTTGGGGACTTTGTTGGAGAGAAATGAGAGAATTTTCGAAGAGTTTAAGTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTTCACTTTGACCATAAGCCCTCGTGGCTTTACTTTGGGCTGCCCAAAAGGCCTCATACTAATGGAGATGTATTCCTTTACTTGTAAACTCATGATCATTCCCTAAATTAGCCAAGGTAGGACTCACTCCCAACAATTCTCAACATTAAGATGATGTGAGAGGAAGTTTCGTCGCTTGCCGAAGTCCATGCGTAATTTTGTGCATCTACTAGCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTACTATACTTTAGACCTTGCCCTTTTGGATTGAAACCCTTTTTTGTATGGTTAGTTTAGTGAGAGGGAATCCTTTTATTAGGGTTTTTCCTGAAGATTATGCTTGGGACTATCCTGAAACATTGAAATCACCACCTATGACCAAGTCACAGGAACAGAGACTGCCAGGTCTTCCAACCTTTGCCAAAAAGCGACCTCTTCGATATGAAAACAAATGATGAATCCAACTAATTAAAATAAATACCTTCCAAATCTTATCAAGAAATGTCCAGGCTTCTTGAACTCCAGAAGACTTAATATAGGGCTTTTTCTACAAACAGCCACAATTTGGCTTTCTTGCAGTAATACAAGTCTGGATTTTACCCTCCCATGTGAAAGTGTTGATCAAGCATCGCTTCTTACCGTTGCTTCAAGCCCTCTTAACATTACAACTTGAGATTCTCGTTGATTATTTCTCTTTGTAGTGTCACTTATCTCTCAAGCCTTGATCATAATAATTGTGTAAGGGAGCTCATTGAAGGAGTTTGTAACCGCCCAAGCCCACCACTATCAGATATTGTCCTCTTTGGATTTTCCCTTTCAGGCTTCCCCTCAAAATTTTCAAAACGCGTCTGCTAGTGAGAAGTTTCCACACCCTTATAAAGGGTGTTTCGTTTTCCTCCCCAACCGATGGAAATCTCACAATCCACCCCTTTGAGGTCCAACGCCCTCGCTACCACTCGTTCCTTTCTCTAATCAAGGTGGGACCCCCTCCAAATTCACCCAATTTGGGGCCAGCATCTTTGCTGACACATCGCGTCATGTCCACCCCATTCAGGGCTCAGCCTCCTCGCTGGCATATCGCTCGGTGTCTGGTTCTGATACCATTTGTAATAGCCCAAGCCCATCGCTAGCGGATATTGTCCTCTTTTTCCTTTTTGAACTTTCCCTCAAGGTTTTTAAACAGAGGTGTAATTATGGGTATTATATTGTAGAATCTTGACCTAGGAAATATCTTGGTCGAACCATGGAAGTATTTAACTGTAGAATTGTGTATTCCCAAGTATCTCTCTGTGGGCTAAACTAAACATTTAACTAATCAGCACGGACCCATCGTTTATTCTTTGTACCCTGTTTGGTCCGTCTTAAGGTTGCTATTTGCATTTGTTTGACAGTAGTTTGAAGAAACAGATATAAATAATAAATCTCCTTTCTTAAACCTTCCTTCCAAGTACCTTGTCCAGCTAAACTAATTTGACGAATTAACATATGAATGTACCTTAAATTGTATCTTAGCTAATGGCTACACTTTTCGGAAAATGCAGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGTAAGTCATCGCTCCCCTAGCCTCGTAAATAAAAATACTGCATGGTCCTTGTGGGACGTGGGGATGTTGTTGTGCTCTAAAGTCTAGGATACATATTTCAACTTGGAGCCTAATTATCAATGGATCGATTTGATCTTAACTTATACTTCACTTTTTGCATCAATCATGTACATCTATGCAAATAGTTTTAGAATATAATTTTGTCAAAATTGTTTGTAAAGGAGCGAACTTAAGTCCTCAAAACCTTCAAACAAAATGATCTCATGAAAAATAAACAACATGCAAAGATTATTATTACTTTAAACTTTGCATAGTTCTTCATTTTGCCATCGTAGATGGCCGACTAATTCAACATTTCATTTGCAAATGTACCAGGCACGATTATTTCTCCAAGGAGGAAGTGGCTGCTGTCGAAGAATGA

mRNA sequence

ATGGCGGCTTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCTACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCACGATTATTTCTCCAAGGAGGAAGTGGCTGCTGTCGAAGAATGA

Coding sequence (CDS)

ATGGCGGCTTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCTACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCACGATTATTTCTCCAAGGAGGAAGTGGCTGCTGTCGAAGAATGA

Protein sequence

MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

Homology

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BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot
Match: O49636 (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-50
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 109
           SRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot
Match: Q8L7H8 (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=MPC2 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-47
Identity = 89/107 (83.18%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE 108
            R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Sbjct: 61  CRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAE-AAVE 106

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot
Match: Q8LD38 (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-47
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
          MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++W
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60

Query: 61 SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY 98
          SRYSTVITPKNWNLFSV++ MA TGIYQLTRKI+HDY
Sbjct: 61 SRYSTVITPKNWNLFSVSLGMAVTGIYQLTRKIKHDY 97

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot
Match: O95563 (Mitochondrial pyruvate carrier 2 OS=Homo sapiens OX=9606 GN=MPC2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-24
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           M   KL+  +NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IW
Sbjct: 23  MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIW 82

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTR 92
           SRYS VI PKNW+LF+VN  +   G  QL R
Sbjct: 83  SRYSLVIIPKNWSLFAVNFFVGAAGASQLFR 113

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot
Match: Q9D023 (Mitochondrial pyruvate carrier 2 OS=Mus musculus OX=10090 GN=Mpc2 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.2e-24
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 5   KLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYS 64
           KL+  +NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS
Sbjct: 27  KLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYS 86

Query: 65  TVITPKNWNLFSVNVAMAGTGIYQLTR 92
            VI PKNW+LF+VN  +   G  QL R
Sbjct: 87  LVIIPKNWSLFAVNFFVGSAGASQLFR 113

[Close]

BLAST of Csor.00g234130.m01 vs. NCBI nr
Match: XP_022925307.1 (mitochondrial pyruvate carrier 4-like [Cucurbita moschata] >XP_023521103.1 mitochondrial pyruvate carrier 4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521104.1 mitochondrial pyruvate carrier 4-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573499.1 Mitochondrial pyruvate carrier 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228 bits (580), Expect = 2.67e-75
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108

[Close]

BLAST of Csor.00g234130.m01 vs. NCBI nr
Match: XP_022994927.1 (mitochondrial pyruvate carrier 4 [Cucurbita maxima])

HSP 1 Score: 227 bits (579), Expect = 3.80e-75
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAA+EE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 108

[Close]

BLAST of Csor.00g234130.m01 vs. NCBI nr
Match: XP_022927623.1 (mitochondrial pyruvate carrier 4 [Cucurbita moschata] >XP_023520406.1 mitochondrial pyruvate carrier 4 [Cucurbita pepo subsp. pepo] >KAG6583761.1 Mitochondrial pyruvate carrier 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019400.1 Mitochondrial pyruvate carrier 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223 bits (569), Expect = 1.27e-73
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVNE 108

[Close]

BLAST of Csor.00g234130.m01 vs. NCBI nr
Match: XP_023001633.1 (mitochondrial pyruvate carrier 4-like [Cucurbita maxima])

HSP 1 Score: 222 bits (566), Expect = 3.66e-73
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV 106
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV 106

[Close]

BLAST of Csor.00g234130.m01 vs. NCBI nr
Match: XP_038894595.1 (mitochondrial pyruvate carrier 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 221 bits (562), Expect = 1.49e-72
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE 108

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL
Match: A0A6J1EBD9 (Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111432600 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.29e-75
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL
Match: A0A6J1JXA3 (Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111490505 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 1.84e-75
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAA+EE
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 108

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL
Match: A0A6J1ELI4 (Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111434390 PE=3 SV=1)

HSP 1 Score: 223 bits (569), Expect = 6.17e-74
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVNE 108

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL
Match: A0A6J1KR30 (Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111495701 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.77e-73
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV 106
           SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV 106

[Close]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL
Match: A0A0A0LTI1 (Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G195220 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 2.94e-72
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVA  +E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 108

[Close]

BLAST of Csor.00g234130.m01 vs. TAIR 10
Match: AT4G22310.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 199.9 bits (507), Expect = 1.0e-51
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 109
           SRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

[Close]

BLAST of Csor.00g234130.m01 vs. TAIR 10
Match: AT4G14695.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-48
Identity = 89/107 (83.18%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE 108
            R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Sbjct: 61  CRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAE-AAVE 106

[Close]

BLAST of Csor.00g234130.m01 vs. TAIR 10
Match: AT4G05590.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-48
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
          MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++W
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60

Query: 61 SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY 98
          SRYSTVITPKNWNLFSV++ MA TGIYQLTRKI+HDY
Sbjct: 61 SRYSTVITPKNWNLFSVSLGMAVTGIYQLTRKIKHDY 97

[Close]

BLAST of Csor.00g234130.m01 vs. TAIR 10
Match: AT4G05590.2 (CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 170.2 bits (430), Expect = 8.8e-43
Identity = 83/135 (61.48%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQI--------- 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI         
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIGIILTIGLS 60

Query: 61  -----------------------------AVTATGIIWSRYSTVITPKNWNLFSVNVAMA 98
                                         +T TG++WSRYSTVITPKNWNLFSV++ MA
Sbjct: 61  YLYSAHIAVMYRCVNFNVYMMPRMAVIVSVITGTGLVWSRYSTVITPKNWNLFSVSLGMA 120

[Close]

BLAST of Csor.00g234130.m01 vs. TAIR 10
Match: AT4G14695.2 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-32
Identity = 70/107 (65.42%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKT                  +F KPPE +SY QQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKT------------------NFQKPPENISYLQQIAVTCTGMIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE 108
            R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Sbjct: 61  CRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAE-AAVE 88

The following BLAST results are available for this feature:

BLAST of Csor.00g234130.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49636	1.5e-50	84.26	Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV...	[more]
Q8L7H8	2.6e-47	83.18	Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=MPC2 PE=3 SV...	[more]
Q8LD38	2.6e-47	85.57	Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV...	[more]
O95563	2.4e-24	53.85	Mitochondrial pyruvate carrier 2 OS=Homo sapiens OX=9606 GN=MPC2 PE=1 SV=1	[more]
Q9D023	5.2e-24	55.17	Mitochondrial pyruvate carrier 2 OS=Mus musculus OX=10090 GN=Mpc2 PE=1 SV=1	[more]

BLAST of Csor.00g234130.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925307.1	2.67e-75	100.00	mitochondrial pyruvate carrier 4-like [Cucurbita moschata] >XP_023521103.1 mitoc...	[more]
XP_022994927.1	3.80e-75	99.07	mitochondrial pyruvate carrier 4 [Cucurbita maxima]	[more]
XP_022927623.1	1.27e-73	96.30	mitochondrial pyruvate carrier 4 [Cucurbita moschata] >XP_023520406.1 mitochondr...	[more]
XP_023001633.1	3.66e-73	97.17	mitochondrial pyruvate carrier 4-like [Cucurbita maxima]	[more]
XP_038894595.1	1.49e-72	94.44	mitochondrial pyruvate carrier 4 isoform X2 [Benincasa hispida]	[more]

BLAST of Csor.00g234130.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBD9	1.29e-75	100.00	Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111432600 PE=...	[more]
A0A6J1JXA3	1.84e-75	99.07	Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111490505 PE=3 ...	[more]
A0A6J1ELI4	6.17e-74	96.30	Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111434390 PE=...	[more]
A0A6J1KR30	1.77e-73	97.17	Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111495701 PE=3 ...	[more]
A0A0A0LTI1	2.94e-72	93.52	Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G195220 PE=3 S...	[more]

BLAST of Csor.00g234130.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22310.1	1.0e-51	84.26	Uncharacterised protein family (UPF0041)	[more]
AT4G14695.1	1.8e-48	83.18	Uncharacterised protein family (UPF0041)	[more]
AT4G05590.1	1.8e-48	85.57	CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR...	[more]
AT4G05590.2	8.8e-43	61.48	CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR...	[more]
AT4G14695.2	2.4e-32	65.42	Uncharacterised protein family (UPF0041)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 6..105 e-value: 9.4E-42 score: 141.6
None	No IPR available	PANTHER	PTHR14154:SF58	MITOCHONDRIAL PYRUVATE CARRIER	coord: 1..101
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g234130	Csor.00g234130	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.CDS05	Csor.00g234130.m01.CDS05	CDS
Csor.00g234130.m01.CDS04	Csor.00g234130.m01.CDS04	CDS
Csor.00g234130.m01.CDS03	Csor.00g234130.m01.CDS03	CDS
Csor.00g234130.m01.CDS02	Csor.00g234130.m01.CDS02	CDS
Csor.00g234130.m01.CDS01	Csor.00g234130.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.terminal01	Csor.00g234130.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.stop_codon01	Csor.00g234130.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.intron04	Csor.00g234130.m01.intron04	intron
Csor.00g234130.m01.intron03	Csor.00g234130.m01.intron03	intron
Csor.00g234130.m01.intron02	Csor.00g234130.m01.intron02	intron
Csor.00g234130.m01.intron01	Csor.00g234130.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.internal03	Csor.00g234130.m01.internal03	internal
Csor.00g234130.m01.internal02	Csor.00g234130.m01.internal02	internal
Csor.00g234130.m01.internal01	Csor.00g234130.m01.internal01	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.initial01	Csor.00g234130.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01.start_codon01	Csor.00g234130.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g234130.m01	Csor.00g234130.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0016021	integral component of membrane