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Csor.00g216460.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAGTCATCAAAAACCCATCTCCGGGAAAGAATCCTTGCCCGCCGCCGCCGGGGAAAGAGACCTGCCCAATTGACACTCTGAAACTGGGTGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGGTAGGGGACCCTGCAGCCAATGCGTGCTGCCCTATAATTTCAGGGCTGGCTGAGTTGGAAGCGGCGGTTTGCCTTTGCACTACCCTTAAGATTAAGGCTCTTAACCTTAATATCTATGTCCCCATTGCCCTTCAGCTCCTTATCACTTGTGGGAAGACCCCTCCTCCTGGCTACACTTGCTCCCTTTAGAAACAAGAACAAAATAAGGTCATCTGCTTTTTTCTCTCAATTTTTCTTTACATAATTAATTTCCTCCAACAAATTAGTCTCTGAATTTTGCATTAAATTCTTTACATATAACTTTAATTATTATTAATATTAAACAATTGCCTTATTGGATTTTTTTTTTTTTTCAGGTTTGA ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAAAACAAGAACAAAATAAGGTTTGA ATGGAGCCTTCAAAAATCCACGCCCTGCTTCTAGTTTGCATGCTTTTCCTCTCCACCGCCGCCCCCATTTTCGGCTGCGGCTCCTGCGGCAAGCCACCTCCCAAGAAGGTCAAGCCCGGCTCCGGTTCCAAGCCCCCTAAGGGCCCCATTGTCCCACCCATCACCCTCCCTCCCGTCGTCAAACCCCCAATCAAAATCCCTCCCGTCCCCCTCCCTCCCGTGAAACCGCCCATCGACCTCCCACCCATCGTCAAACCACCAATCAAAATCCCTCCAGTCCCTCTCCCTCCCGTGAAACCGCCAATTGACCTCCCACCCGTCGTCAAACCACCAATCAAAATCCCCCCAGTTCCCCTCCCTCCTGTCAAACCGCCTATCGACCTCCCACCCGTCATCAAACCCCCAATCAAAATCCCTCCAGTCCCCATCCCTCCAGTCACCGTGCCGCCAGTGACGGCTCCTCCAAAACAAGAACAAAATAAGGTTTGA MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKPPKGPIVPPITLPPVVKPPIKIPPVPLPPVKPPIDLPPIVKPPIKIPPVPLPPVKPPIDLPPVVKPPIKIPPVPLPPVKPPIDLPPVIKPPIKIPPVPIPPVTVPPVTAPPKQEQNKV Homology
BLAST of Csor.00g216460.m01 vs. ExPASy Swiss-Prot
Match: Q40375 (Repetitive proline-rich cell wall protein 2 OS=Medicago truncatula OX=3880 GN=PRP2 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.3e-12 Identity = 82/158 (51.90%), Postives = 100/158 (63.29%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy Swiss-Prot
Match: Q40358 (Repetitive proline-rich cell wall protein OS=Medicago sativa OX=3879 GN=PRP PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11 Identity = 75/136 (55.15%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy Swiss-Prot
Match: P13993 (Repetitive proline-rich cell wall protein 2 OS=Glycine max OX=3847 GN=PRP2 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy Swiss-Prot
Match: Q43564 (Repetitive proline-rich cell wall protein 1 OS=Medicago truncatula OX=3880 GN=PRP1 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10 Identity = 80/151 (52.98%), Postives = 93/151 (61.59%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy Swiss-Prot
Match: P08012 (Repetitive proline-rich cell wall protein 1 OS=Glycine max OX=3847 GN=PRP1 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10 Identity = 74/134 (55.22%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. NCBI nr
Match: KAG6589826.1 (Repetitive proline-rich cell wall protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 277 bits (708), Expect = 4.47e-93 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. NCBI nr
Match: KAG7023496.1 (36.4 kDa proline-rich protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263 bits (672), Expect = 3.57e-86 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. NCBI nr
Match: XP_023515483.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260 bits (664), Expect = 5.87e-85 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. NCBI nr
Match: XP_022987840.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima]) HSP 1 Score: 244 bits (624), Expect = 6.17e-79 Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. NCBI nr
Match: XP_022961343.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata]) HSP 1 Score: 213 bits (542), Expect = 9.18e-67 Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy TrEMBL
Match: A0A6J1JHY3 (36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111485263 PE=3 SV=1) HSP 1 Score: 244 bits (624), Expect = 2.99e-79 Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy TrEMBL
Match: A0A6J1HBI4 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111461860 PE=3 SV=1) HSP 1 Score: 213 bits (542), Expect = 4.45e-67 Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy TrEMBL
Match: A0A7J6UY92 (Repetitive proline-rich cell wall protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_032804 PE=4 SV=1) HSP 1 Score: 156 bits (394), Expect = 4.54e-44 Identity = 102/168 (60.71%), Postives = 128/168 (76.19%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy TrEMBL
Match: A0A7J9BN52 (Uncharacterized protein (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_011067 PE=4 SV=1) HSP 1 Score: 144 bits (362), Expect = 1.36e-40 Identity = 101/175 (57.71%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. ExPASy TrEMBL
Match: A0A2R6QIF5 (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18748 PE=4 SV=1) HSP 1 Score: 146 bits (368), Expect = 2.39e-40 Identity = 104/175 (59.43%), Postives = 124/175 (70.86%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10 Identity = 60/139 (43.17%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. TAIR 10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 5.3e-07 Identity = 62/161 (38.51%), Postives = 96/161 (59.63%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. TAIR 10
Match: AT2G10940.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 5.3e-07 Identity = 62/161 (38.51%), Postives = 96/161 (59.63%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein ) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-05 Identity = 64/143 (44.76%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of Csor.00g216460.m01 vs. TAIR 10
Match: AT5G14920.2 (Gibberellin-regulated family protein ) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-05 Identity = 64/143 (44.76%), Postives = 74/143 (51.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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