Csor.00g195630.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g195630.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Small COPII coat GTPase SAR1
Location	Csor_Chr01: 1417620 .. 1419445 (+)
Sequence length	582
RNA-Seq Expression	Csor.00g195630.m01
Synteny	Csor.00g195630.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACTACTCTTCTCCATATGTTGAAGGATGAGGTTTGATTTCTTGCCTTTTCTGTTTGCTTGATTTCTGTTTTTGCAATTTGGGGGAATCGGTGTGTTTAGATTTGGATTTGACTGAGGAATCGAAATGGTGGGGGATTTTGGCTTGATTGTTATGGTGTGGATTGGTTATTGTTGTTTGTTTGTTTGTTTGTTTGTTTTGGTTTCTTTGTTCTATAGAGGCTTGTTCAGCACCAGCCAACACAGTACCCGACGTCTGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCGTTTGATTTGGGTGGGCATCAAATTGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAATAAAACACTGTTTTTCTTGAATTCAAGCTGATTGTATTTCCATTTTCGTGGTGAATTTCTTGGGCATTCGGCTCTGTTGAGAAGCACTTTACTCTTGAAACTTGTACTCTTTACCAATTGTTATGTGTTTTCAGATTACAATTATGTTTGATTCCCAACTGGTTGCTGGAAATACTCATGAGCTTATATTTGTTGCATTTTTCATAATTATGCTGCCAATTCCTCTAGCTGATGTGTTGTAGCAGAATTTTTTCTATAATCTTCTGAACTTGTTGCGTTTCCATCCATTATGCTTGCAATTATGCCCCCACACCGTTCTTCCATTGATCCAAGTTGAATGAACAGTGCCATTAGTTACTTTTGTTATTTTCAGTTTGTTGATATATATGAGATCCTATTCATAACCGTGAAAACCATCAAAAGAGCCAATGGTATACTCGTCTGCCTGATTTTGCAGAGCAAAGACCTCTCCAAAGTAGTCTTTTAGTATAGAACAGAGGCATTCTGAGCCAACTACTACGACTACATGTGCATCTAGTGTAGTGGCTATAGAAGCCCTCGTCCAAATGAGTATTTTATAGAGAGCCGACAAGAAATTCCATTAATAACTGCCCGTTTTGATTCTTTGGAACAACTCGGTGAATTTTTGTTCTTGAGCTGCATATCACTCGTTCAGTTTTGGTGCTTTCCATCAGTTGTTTATCTTACATCTTGCTGTTTGATTGCGTTAATGGAAACTTCCTAGTGGTATTTTTTTCTTAAGAATTGATACATGATCTTCTGAACTCTGTTGCTGAATGGATTATAACAATGTATCCATAGCACGGCACCTTCGAAAGAACTTTAGTTATGTTCTTCAAGCTGTCGGTGTGTCCAATGTTCTGTTCTGCTGAAGCTAGAGAGCATTTTGCAGAGTCGGGCTTGTAGACCGTGCGGTGTTTTGTTGTTGTGCTATATGGATGATGTTGGATGATTCTTCATATATTTCCAACTTCCTGCAATAGTATGTCGCTTAAGACGTGCTTCTAATTTTGTATGAAAATGAATGTAACAGGTAGATGCTGTCGTGTACCTAGTCGACGCCTTCGACAAAGAAAGGTTTGCAGAATCGAAGAAGGAGCTCGACGCTCTTCTCTCTGATGAATCGCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATCGACATTCCATATGCAGCCTCAGAGGACGAATTGCGCTACCATCTTGGCTTGACCAACTTCACCACTGGCAAGGGAAAAGTAAATCTGACTGATTCAAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTATGGCGACGGTTTCAAGTGGATGTCTCAATACATCAAGTAG

mRNA sequence

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACTACTCTTCTCCATATGTTGAAGGATGAGAGGCTTGTTCAGCACCAGCCAACACAGTACCCGACGTCTGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCGTTTGATTTGGGTGGGCATCAAATTGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAGATGCTGTCGTGTACCTAGTCGACGCCTTCGACAAAGAAAGGTTTGCAGAATCGAAGAAGGAGCTCGACGCTCTTCTCTCTGATGAATCGCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATCGACATTCCATATGCAGCCTCAGAGGACGAATTGCGCTACCATCTTGGCTTGACCAACTTCACCACTGGCAAGGGAAAAGTAAATCTGACTGATTCAAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTATGGCGACGGTTTCAAGTGGATGTCTCAATACATCAAGTAG

Coding sequence (CDS)

ATGTTCCTCATTGACTGGTTCTACGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACTACTCTTCTCCATATGTTGAAGGATGAGAGGCTTGTTCAGCACCAGCCAACACAGTACCCGACGTCTGAGGAGTTGAGTATTGGAAAAATCAAATTCAAGGCGTTTGATTTGGGTGGGCATCAAATTGCTCGTAGAGTCTGGAAGGATTATTATGCTAAGGTAGATGCTGTCGTGTACCTAGTCGACGCCTTCGACAAAGAAAGGTTTGCAGAATCGAAGAAGGAGCTCGACGCTCTTCTCTCTGATGAATCGCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATCGACATTCCATATGCAGCCTCAGAGGACGAATTGCGCTACCATCTTGGCTTGACCAACTTCACCACTGGCAAGGGAAAAGTAAATCTGACTGATTCAAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTATGGCGACGGTTTCAAGTGGATGTCTCAATACATCAAGTAG

Protein sequence

MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK

Homology

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BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.0e-106
Identity = 186/193 (96.37%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           +VPFLILGNKIDIPYAASEDELRYHLGL+NFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.4e-104
Identity = 183/193 (94.82%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGL+NFTTGKGKV+L  SNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.5e-103
Identity = 180/192 (93.75%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESK+ELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV L DS VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYI 193
           YG+GFKW+SQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.8e-100
Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IG IKFKAFDLGGHQIARRVW+DYYAKVDAVVYLVDA D+ERF E+KKELD LLSDESL 
Sbjct: 61  IGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLT 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLT  TTGKG +NL  +NVRP+EVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKWMSQYIK
Sbjct: 181 YGEGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 4.7e-100
Identity = 177/194 (91.24%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERF+ESKKELDALLSD++LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLT--DSNVRPLEVFMCSIVRK 180
            VPFLILGNKID PYAASEDELRYHLGLTNFTTGKGKV     DS VRPLEVFMCSIVRK
Sbjct: 121 TVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRK 180

Query: 181 MGYGDGFKWMSQYI 193
           MGYG+GFKW+SQYI
Sbjct: 181 MGYGEGFKWLSQYI 194

[Close]

BLAST of Csor.00g195630.m01 vs. NCBI nr
Match: XP_022949318.1 (GTP-binding protein SAR1A [Cucurbita moschata] >XP_022998257.1 GTP-binding protein SAR1A [Cucurbita maxima] >XP_023525540.1 GTP-binding protein SAR1A [Cucurbita pepo subsp. pepo] >KAG6606943.1 GTP-binding protein SAR1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036647.1 GTP-binding protein SAR1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393 bits (1009), Expect = 5.97e-138
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. NCBI nr
Match: XP_004152229.1 (GTP-binding protein SAR1A [Cucumis sativus] >KGN52847.1 hypothetical protein Csa_015394 [Cucumis sativus])

HSP 1 Score: 390 bits (1003), Expect = 4.91e-137
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. NCBI nr
Match: XP_038906423.1 (GTP-binding protein SAR1A [Benincasa hispida])

HSP 1 Score: 389 bits (999), Expect = 2.00e-136
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           +VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNL DSNVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. NCBI nr
Match: XP_008454296.1 (PREDICTED: GTP-binding protein SAR1A [Cucumis melo] >XP_022155321.1 GTP-binding protein SAR1A [Momordica charantia])

HSP 1 Score: 389 bits (998), Expect = 2.84e-136
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNL DSNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. NCBI nr
Match: XP_022728059.1 (GTP-binding protein SAR1A [Durio zibethinus])

HSP 1 Score: 389 bits (998), Expect = 2.84e-136
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNL DSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL
Match: A0A6J1K7F7 (GTP-binding protein SAR1A OS=Cucurbita maxima OX=3661 GN=LOC111492948 PE=3 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 2.89e-138
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL
Match: A0A6J1GBP2 (GTP-binding protein SAR1A OS=Cucurbita moschata OX=3662 GN=LOC111452707 PE=3 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 2.89e-138
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL
Match: A0A0A0KWN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003610 PE=3 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 2.38e-137
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL
Match: A0A6A2XY80 (GTP-binding protein SAR1B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111851pilonHSYRG00036 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 1.38e-136
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAES+KELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESRKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNL DSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL
Match: A0A6J1DRD5 (GTP-binding protein SAR1A OS=Momordica charantia OX=3673 GN=LOC111022454 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 1.38e-136
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNL DSNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 193
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 )

HSP 1 Score: 386.3 bits (991), Expect = 1.4e-107
Identity = 186/193 (96.37%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           +VPFLILGNKIDIPYAASEDELRYHLGL+NFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 379.4 bits (973), Expect = 1.7e-105
Identity = 182/192 (94.79%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDESLA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLT+FTTGKGKVNL  +NVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTSFTTGKGKVNLAGTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYI 193
           YG+GFKW+SQYI
Sbjct: 181 YGEGFKWVSQYI 192

[Close]

BLAST of Csor.00g195630.m01 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B )

HSP 1 Score: 375.2 bits (962), Expect = 3.2e-104
Identity = 180/192 (93.75%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESK+ELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV L DS VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYI 193
           YG+GFKW+SQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Csor.00g195630.m01 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 )

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-98
Identity = 172/193 (89.12%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGL +KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLA 120
           IGKI FKAFDLGGHQIARRVWKD YAKVDAVVYLVDA+D++RF ESK+ELDALLSDE+LA
Sbjct: 61  IGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180
           NVP LILGNKIDIPYA+SEDELRY+LGLTNFTTGKG VNL DS VRPLEVFMCSIVRKMG
Sbjct: 121 NVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Csor.00g195630.m01 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.1e-54
Identity = 98/111 (88.29%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 83  DYYAKVDAVVYLVDAFDKERFAESKKELDALLSDESLANVPFLILGNKIDIPYAASEDEL 142
           +++++VDA+VYLVDA+D+ERFAESKKELDALLSDESLA VPFLILGNKIDIPYAASEDEL
Sbjct: 12  EWFSQVDALVYLVDAYDQERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDEL 71

Query: 143 RYHLGLTNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 194
           R+HLGL+NFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYG+GFKW+SQYIK
Sbjct: 72  RFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 122

The following BLAST results are available for this feature:

BLAST of Csor.00g195630.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04834	2.0e-106	96.37	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
O04266	2.4e-104	94.82	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
Q01474	4.5e-103	93.75	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
P52884	2.8e-100	90.16	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]
O04267	4.7e-100	91.24	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]

BLAST of Csor.00g195630.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949318.1	5.97e-138	100.00	GTP-binding protein SAR1A [Cucurbita moschata] >XP_022998257.1 GTP-binding prote...	[more]
XP_004152229.1	4.91e-137	99.48	GTP-binding protein SAR1A [Cucumis sativus] >KGN52847.1 hypothetical protein Csa...	[more]
XP_038906423.1	2.00e-136	98.96	GTP-binding protein SAR1A [Benincasa hispida]	[more]
XP_008454296.1	2.84e-136	98.96	PREDICTED: GTP-binding protein SAR1A [Cucumis melo] >XP_022155321.1 GTP-binding ...	[more]
XP_022728059.1	2.84e-136	98.45	GTP-binding protein SAR1A [Durio zibethinus]	[more]

BLAST of Csor.00g195630.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7F7	2.89e-138	100.00	GTP-binding protein SAR1A OS=Cucurbita maxima OX=3661 GN=LOC111492948 PE=3 SV=1	[more]
A0A6J1GBP2	2.89e-138	100.00	GTP-binding protein SAR1A OS=Cucurbita moschata OX=3662 GN=LOC111452707 PE=3 SV=...	[more]
A0A0A0KWN6	2.38e-137	99.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003610 PE=3 SV=1	[more]
A0A6A2XY80	1.38e-136	98.45	GTP-binding protein SAR1B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111851pil...	[more]
A0A6J1DRD5	1.38e-136	98.96	GTP-binding protein SAR1A OS=Momordica charantia OX=3673 GN=LOC111022454 PE=3 SV...	[more]

BLAST of Csor.00g195630.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02080.1	1.4e-107	96.37	secretion-associated RAS super family 2	[more]
AT3G62560.1	1.7e-105	94.79	Ras-related small GTP-binding family protein	[more]
AT1G56330.1	3.2e-104	93.75	secretion-associated RAS 1B	[more]
AT1G09180.1	1.2e-98	89.12	secretion-associated RAS super family 1	[more]
AT1G02620.1	3.1e-54	88.29	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 77..102 score: 82.13 coord: 166..190 score: 79.53 coord: 22..45 score: 94.61 coord: 50..74 score: 86.12 coord: 122..143 score: 90.11
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 4..192 e-value: 1.7E-132 score: 456.1
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 8..192 e-value: 3.8E-65 score: 218.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..193 e-value: 6.9E-18 score: 75.4
None	No IPR available	PANTHER	PTHR45684:SF30	GTP-BINDING PROTEIN SAR1A	coord: 1..193
None	No IPR available	PROSITE	PS51417	ARF	coord: 14..192 score: 15.650902
None	No IPR available	PROSITE	PS51422	SAR1	coord: 14..192 score: 30.388046
None	No IPR available	CDD	cd00879	Sar1	coord: 2..192 e-value: 3.20417E-132 score: 366.603
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..193 e-value: 7.3E-76 score: 255.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..192
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 19..135 e-value: 1.6E-15 score: 55.2
IPR006687	Small GTPase superfamily, SAR1-type	PANTHER	PTHR45684	RE74312P	coord: 1..193

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g195630	Csor.00g195630	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.CDS03	Csor.00g195630.m01.CDS03	CDS
Csor.00g195630.m01.CDS02	Csor.00g195630.m01.CDS02	CDS
Csor.00g195630.m01.CDS01	Csor.00g195630.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.initial01	Csor.00g195630.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.start_codon01	Csor.00g195630.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.intron02	Csor.00g195630.m01.intron02	intron
Csor.00g195630.m01.intron01	Csor.00g195630.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.internal01	Csor.00g195630.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.terminal01	Csor.00g195630.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01.stop_codon01	Csor.00g195630.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g195630.m01	Csor.00g195630.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum
biological_process	GO:0003400	regulation of COPII vesicle coating
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0070971	endoplasmic reticulum exit site
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding