Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATACCTTCTTCAAATTGAACAATCTCCATAATAAGAAGGCTGGTTCGCTGTTGCTAGCGCTTCTGGGCTCTGCTACTCTGCTGCAGGGTCAACTCCTTCATCCTGCGCCCGAGTCTCAGTGGGAACAAAGTCTTCAAATCATACGGCCAAGATCCATCCATCAATCAATCGAGCTGGGGCGGGCGGGCGGGCGTGCATCCAGTCTCCCTCTCGTTGCTGCCGCCGTGCTCCCTCCTCCATCGCCATCAAAGTTTGCCTGTCGGATAACCTTCCACGTGAAAAAATTAAAAGCCAAGTGGAAGTGGAAGTGGGAGTGGAAGTGGGAATTAATGAAATCAGAGAGACGTTTTTAA mRNA sequence ATGAATACCTTCTTCAAATTGAACAATCTCCATAATAAGAAGGCTGGTTCGCTGTTGCTAGCGCTTCTGGGCTCTGCTACTCTGCTGCAGGGTCAACTCCTTCATCCTGCGCCCGAGTCTCAGTGGGAACAAAGTCTTCAAATCATACGGCCAAGATCCATCCATCAATCAATCGAGCTGGGGCGGGCGGGCGGGCGTGCATCCAGTCTCCCTCTCGTTGCTGCCGCCGTGCTCCCTCCTCCATCGCCATCAAAGTTTGCCTGTCGGATAACCTTCCACGTGAAAAAATTAAAAGCCAAGTGGAAGTGGAAGTGGGAGTGGAAGTGGGAATTAATGAAATCAGAGAGACGTTTTTAA Coding sequence (CDS) ATGAATACCTTCTTCAAATTGAACAATCTCCATAATAAGAAGGCTGGTTCGCTGTTGCTAGCGCTTCTGGGCTCTGCTACTCTGCTGCAGGGTCAACTCCTTCATCCTGCGCCCGAGTCTCAGTGGGAACAAAGTCTTCAAATCATACGGCCAAGATCCATCCATCAATCAATCGAGCTGGGGCGGGCGGGCGGGCGTGCATCCAGTCTCCCTCTCGTTGCTGCCGCCGTGCTCCCTCCTCCATCGCCATCAAAGTTTGCCTGTCGGATAACCTTCCACGTGAAAAAATTAAAAGCCAAGTGGAAGTGGAAGTGGGAGTGGAAGTGGGAATTAATGAAATCAGAGAGACGTTTTTAA Protein sequence MNTFFKLNNLHNKKAGSLLLALLGSATLLQGQLLHPAPESQWEQSLQIIRPRSIHQSIELGRAGGRASSLPLVAAAVLPPPSPSKFACRITFHVKKLKAKWKWKWEWKWELMKSERRF
Homology
BLAST of Csor.00g164560.m01 vs. NCBI nr
Match: KAG6601342.1 (hypothetical protein SDJN03_06575, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236 bits (602), Expect = 2.47e-78 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query: 1 MNTFFKLNNLHNKKAGSLLLALLGSATLLQGQLLHPAPESQWEQSLQIIRPRSIHQSIEL 60
MNTFFKLNNLHNKKAGSLLLALLGSATLLQGQLLHPAPESQWEQSLQIIRPRSIHQSIEL
Sbjct: 1 MNTFFKLNNLHNKKAGSLLLALLGSATLLQGQLLHPAPESQWEQSLQIIRPRSIHQSIEL 60
Query: 61 GRAGGRASSLPLVAAAVLPPPSPSKFACRITFHVKKLKAKWKWKWEWKWELMKSERRF 118
GRAGGRASSLPLVAAAVLPPPSPSKFACRITFHVKKLKAKWKWKWEWKWELMKSERRF
Sbjct: 61 GRAGGRASSLPLVAAAVLPPPSPSKFACRITFHVKKLKAKWKWKWEWKWELMKSERRF 118
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6601342.1 | 2.47e-78 | 100.00 | hypothetical protein SDJN03_06575, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g164560.m01.CDS01 | Csor.00g164560.m01.CDS01 | CDS |
The following single feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g164560.m01.single01 | Csor.00g164560.m01.single01 | single |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g164560.m01.start_codon01 | Csor.00g164560.m01.start_codon01 | start_codon |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g164560.m01.stop_codon01 | Csor.00g164560.m01.stop_codon01 | stop_codon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Csor.00g164560.m01 | Csor.00g164560.m01-protein | polypeptide |
|
