Csor.00g163000.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g163000.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Acyl carrier protein
Location	Csor_Chr13: 6992616 .. 6993088 (-)
Sequence length	360
RNA-Seq Expression	Csor.00g163000.m01
Synteny	Csor.00g163000.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGACAAGCTAAGTCGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTAATTATCCGGGATCGATCACCTATCATCTCGTCTTTGAATTTTTATATCACTTGCCAGGATTTTTGTAGATTCACTCCTAATTATCATATGCTATTGAAACGACTGAGCAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGA

mRNA sequence

ATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGACAAGCTAAGTCGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGA

Coding sequence (CDS)

ATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGACAAGCTAAGTCGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGA

Protein sequence

MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH

Homology

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot
Match: Q9FGJ4 (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.8e-25
Identity = 66/120 (55.00%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTS---TDTSSDEIVDRVIGLVKKFDRIDACKV 60
           +++RV    T LL ++EN    +     TS    D   D+I+ RVI LVKK+D+ +  +V
Sbjct: 12  LRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYDKTNTSEV 71

Query: 61  TETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEE 118
           TE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA YI S+      E
Sbjct: 72  TERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYILSETPTKASE 130

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot
Match: P53665 (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 3   IRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETAD 62
           +RVP  T  L       +  +          S + +VDRV+ +VK F ++D  KVT    
Sbjct: 11  LRVPVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVH 70

Query: 63  FQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 108
           FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 71  FQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot
Match: O80800 (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-14
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 37  EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADK 96
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 97  LTCCADVARYIAS 110
           +        +IAS
Sbjct: 109 IQSIDLAVDFIAS 121

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot
Match: Q54E22 (Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=ndufab1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.4e-14
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 34  SSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEK 93
           S  EI DRVIG+V ++D++    VT T  F K+L LDSLD  ++++A E+EF IEIPDE+
Sbjct: 41  SEKEITDRVIGVVSQYDKVSGKTVTPTTTF-KELGLDSLDSADILVAVEEEFGIEIPDEE 100

Query: 94  ADKLTCCADVARYI 108
           ADK+T CA+   Y+
Sbjct: 101 ADKITSCAETISYL 113

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot
Match: Q9CR21 (Acyl carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Ndufab1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 23  LSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFE 82
           L R    +   + D I DRV+ ++K +D+ID  K++  + F KDL LDSLD+VE++MA E
Sbjct: 64  LCRQYSDAPPLTLDGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAME 123

Query: 83  QEFSIEIPDEKADKLTCCADVARYIASQ 111
            EF  EIPD  A+KL C  ++  YIA +
Sbjct: 124 DEFGFEIPDIDAEKLMCPQEIVDYIADK 151

[Close]

BLAST of Csor.00g163000.m01 vs. NCBI nr
Match: KAG6583746.1 (Acyl carrier protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232 bits (592), Expect = 8.91e-77
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119

[Close]

BLAST of Csor.00g163000.m01 vs. NCBI nr
Match: XP_022927340.1 (acyl carrier protein 3, mitochondrial isoform X2 [Cucurbita moschata] >KAG7019387.1 Acyl carrier protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232 bits (592), Expect = 1.28e-76
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 130

[Close]

BLAST of Csor.00g163000.m01 vs. NCBI nr
Match: XP_022927338.1 (acyl carrier protein 3, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 232 bits (592), Expect = 2.75e-76
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 35  MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 94

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 95  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 153

[Close]

BLAST of Csor.00g163000.m01 vs. NCBI nr
Match: XP_023001631.1 (acyl carrier protein 3, mitochondrial [Cucurbita maxima] >XP_023001632.1 acyl carrier protein 3, mitochondrial [Cucurbita maxima])

HSP 1 Score: 231 bits (588), Expect = 5.22e-76
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIM+KLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRVPNTTTQLLIKDENIMEKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 130

[Close]

BLAST of Csor.00g163000.m01 vs. NCBI nr
Match: XP_023520171.1 (acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520172.1 acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (580), Expect = 8.66e-75
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIM+KLS HLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 130

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL
Match: A0A6J1ENM4 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 6.20e-77
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 130

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL
Match: A0A6J1EKQ6 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.33e-76
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 35  MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 94

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 95  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 153

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL
Match: A0A6J1KJ66 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111495700 PE=3 SV=1)

HSP 1 Score: 231 bits (588), Expect = 2.53e-76
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIRVPNTTTQLLIKDENIM+KLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRVPNTTTQLLIKDENIMEKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 119
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH 130

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL
Match: A0A6J1CN02 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111012616 PE=3 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.33e-62
Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           M+IR+PNTTT L +KDE +M+KL+ HLCTS  TSSD+IVDRVIGLVKKFDRIDA KVTET
Sbjct: 12  MRIRIPNTTTWLFMKDETVMEKLTXHLCTSKGTSSDQIVDRVIGLVKKFDRIDASKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEE 117
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI S+VEE +EE
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYITSKVEEEREE 128

[Close]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL
Match: A0A1S3CK44 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 1.56e-61
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTET 60
           MKIR PN TT+ L+KDEN+++KL+R LCTST  SS+EI DRVIGLVKKFDRIDACKVTET
Sbjct: 12  MKIRGPNNTTKQLMKDENVIEKLTRCLCTSTGRSSNEIADRVIGLVKKFDRIDACKVTET 71

Query: 61  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEK 118
           ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDE+ADKLTCCA+VARYI SQVE+ KEEK
Sbjct: 72  ADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCANVARYITSQVEKKKEEK 129

[Close]

BLAST of Csor.00g163000.m01 vs. TAIR 10
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 66/120 (55.00%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTS---TDTSSDEIVDRVIGLVKKFDRIDACKV 60
           +++RV    T LL ++EN    +     TS    D   D+I+ RVI LVKK+D+ +  +V
Sbjct: 12  LRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYDKTNTSEV 71

Query: 61  TETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEE 118
           TE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA YI S+      E
Sbjct: 72  TERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYILSETPTKASE 130

[Close]

BLAST of Csor.00g163000.m01 vs. TAIR 10
Match: AT5G47630.2 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 66/120 (55.00%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 1   MKIRVPNTTTQLLIKDENIMDKLSRHLCTS---TDTSSDEIVDRVIGLVKKFDRIDACKV 60
           +++RV    T LL ++EN    +     TS    D   D+I+ RVI LVKK+D+ +  +V
Sbjct: 12  LRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYDKTNTSEV 71

Query: 61  TETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEE 118
           TE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA YI S+      E
Sbjct: 72  TERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYILSETPTKASE 130

[Close]

BLAST of Csor.00g163000.m01 vs. TAIR 10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1 )

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 3   IRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETAD 62
           +RVP  T  L       +  +          S + +VDRV+ +VK F ++D  KVT    
Sbjct: 11  LRVPVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVH 70

Query: 63  FQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 108
           FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 71  FQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of Csor.00g163000.m01 vs. TAIR 10
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2 )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 37  EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADK 96
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 97  LTCCADVARYIAS 110
           +        +IAS
Sbjct: 109 IQSIDLAVDFIAS 121

[Close]

BLAST of Csor.00g163000.m01 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 50.8 bits (120), Expect = 8.6e-07
Identity = 32/92 (34.78%), Postives = 46/92 (50.00%), Query Frame = 0


Query: 24  SRHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQ 83
           SR L  S   +  E +++V  +VKK   +   K         DL  DSLD VE+VM  E+
Sbjct: 47  SRRLSVSC-AAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEE 106

Query: 84  EFSIEIPDEKADKLTCCADVARYIASQVEENK 116
           EF+I++ +EKA K+      A  I   + E K
Sbjct: 107 EFNIQMAEEKAQKIATVEQAAELIEELINEKK 137

The following BLAST results are available for this feature:

BLAST of Csor.00g163000.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGJ4	6.8e-25	55.00	Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
P53665	8.4e-15	40.95	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 ...	[more]
O80800	3.2e-14	53.42	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
Q54E22	5.4e-14	51.35	Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=nduf...	[more]
Q9CR21	2.7e-13	44.32	Acyl carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Ndufab1 PE=1 SV=...	[more]

BLAST of Csor.00g163000.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583746.1	8.91e-77	100.00	Acyl carrier protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022927340.1	1.28e-76	100.00	acyl carrier protein 3, mitochondrial isoform X2 [Cucurbita moschata] >KAG701938...	[more]
XP_022927338.1	2.75e-76	100.00	acyl carrier protein 3, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_023001631.1	5.22e-76	99.16	acyl carrier protein 3, mitochondrial [Cucurbita maxima] >XP_023001632.1 acyl ca...	[more]
XP_023520171.1	8.66e-75	98.32	acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520172...	[more]

BLAST of Csor.00g163000.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENM4	6.20e-77	100.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1	[more]
A0A6J1EKQ6	1.33e-76	100.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1	[more]
A0A6J1KJ66	2.53e-76	99.16	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111495700 PE=3 SV=1	[more]
A0A6J1CN02	1.33e-62	84.62	Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111012616 PE=3 SV=1	[more]
A0A1S3CK44	1.56e-61	83.90	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1	[more]

BLAST of Csor.00g163000.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47630.1	4.8e-26	55.00	mitochondrial acyl carrier protein 3	[more]
AT5G47630.2	4.8e-26	55.00	mitochondrial acyl carrier protein 3	[more]
AT2G44620.1	5.9e-16	40.95	mitochondrial acyl carrier protein 1	[more]
AT1G65290.1	2.3e-15	53.42	mitochondrial acyl carrier protein 2	[more]
AT3G05020.1	8.6e-07	34.78	acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 27..118 e-value: 1.9E-25 score: 90.9
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 34..114
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 40..107 e-value: 9.6E-10 score: 38.7
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 36..111 score: 17.727859
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 36..110 e-value: 5.9E-23 score: 78.5
IPR003231	Acyl carrier protein (ACP)	PANTHER	PTHR20863	ACYL CARRIER PROTEIN	coord: 1..116
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 37..111 score: 16.257858
None	No IPR available	PANTHER	PTHR20863:SF60	ACYL CARRIER PROTEIN 3, MITOCHONDRIAL	coord: 1..116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g163000	Csor.00g163000	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.CDS02	Csor.00g163000.m01.CDS02	CDS
Csor.00g163000.m01.CDS01	Csor.00g163000.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.terminal01	Csor.00g163000.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.stop_codon01	Csor.00g163000.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.intron01	Csor.00g163000.m01.intron01	intron

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.initial01	Csor.00g163000.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01.start_codon01	Csor.00g163000.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g163000.m01	Csor.00g163000.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000036	acyl carrier activity