Csor.00g152270.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g152270.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr14: 3610105 .. 3612255 (-)
Sequence length	2151
RNA-Seq Expression	Csor.00g152270.m01
Synteny	Csor.00g152270.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTTCATAGTAATTGGTGTCCAATTAGTAGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGAATAAATCGTGTTGGGTTTTCTGATAGTTGTTATGGAAATGGGAATTTCTCTTTGATTTCCTTTAATTTTAGTGTTTTGAGAAGTGGATTTTGTTGCGAGACTTCGAGATTTGAATGTATCCGTGAGTTCCGCCATGGCTGTTCTTCTAAGCTTAGAGTTGCTCCGTTAATGAAGCCGAAGAGGAATTCCCTTGGGGCTTGGTTTTTATTTGCTTGGGCTGTTGAACAGCCAACGATTGATGATGAAATTGCTAGGCTTGAATCAAATTCTAGCGATGATTTTCCTGAGAGTAGTTTAGATTGGGATGTATATGATCCTGGCAATGTTAATAGTGAAAATAGTCATGGAAGAGGAAATTTTAAAGACGAGGAAGGAATGGAGGGAGAGGGAGATGTTAGGGTCGATGTTCGTGCACTAGCACGTCGGTTGCAGCTTGCTCGAACGGCGGATGATGTTGAGGAGCTTCTCAAGGATGTCGGCGTATTGCCTCTTCAAGTGTTCTCATCCATTATTAGAGGTTTTGGGAGGAACAGAAGGTTGGAATGTGCAGTGGCTCTTGTTGAATGGCTTAAGAAAAAGAAGATTGAAACTAATGGTCTTATTGCGCCGAATTTGTTCATATACAACAGTCTTCTCGGTGCAGTTAAGCAATCCGGAGAGTTTTCGAAAATGGAAGATGTCTTGACTGATATGGCACAGGAAGGAATCGTTTCAAATGTTGTTACGTACAATACGATTATGTCCATTTACTTGGAACAAGGACTAGCTATAAAATCTCTTGGCATTCTCGAAGAGATGCCGAGGAAAGGCCTAACTCCATGTCCTGTGTCCTACTCTACAGCATTACAAGCATACCGAAGGATGAATGATGGGAATGGCGCTTTAAAGTTTATGATTGAGTTGAGAGAAAGATATCGTAATGGCGAGTTAGTGAAAGATGATAATGTAGATTGGGCTGATAAGTTCTTGAAGCTCGAAAAGTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGACGACCCCGCAAACACAAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCGGGATTGTCGCTTGATCGTGTTGAAGAAGAACGACTTATTTGGGCTTGTACGTGTGCCGAACACCATAATGTAGCGAAAGAATTGTACTACAGGATAAGAGAAAAGCAATGTAGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATCTGTTGGAGAAAGGACCAAAACCAAATAATTTGTCAAATGAACTAATTGTTTCTCACTTCAATGTTCTTCTCACAGCTGCGAAGAAACGAGGAATTTGGAGATGGGGCGTTAGGTTACTCGACAAAATGGAAGAGAAAGGTCTTAAACCCGGAATTCGGGAATGGAATGCCGTTCTTGTTGCCTGTTCCAGAGCTGCAGAAACGTCGGCAGCTATAGATATCTTTAGGAGAATGGTCGAAAAAGGTGAAAAACCGACTGTCCTTTCATATGGGGCATTACTAAGCGCTCTCGAAAAGGGAAAGCTCTACGACGAAGCACGTAGCGTCTGGGATCATATGATTAAAGTTGGGGTGGAGCCCAACATCTATGCCTATACAACCATGACTTCGATTTTCACTGGCCAAGGAAAGTTTAATATGGTTGATGTCACTCTCAATGATATGGTTACATCAGGCATTGAGCCAACAGTCGTCACATACAACGCGATAATTACGGGATGTGTCCGTAACGGGATGAGCAGTGTAGCTTACGAGTGGTTTCACCGCATGAAAGCTCGAAATATCTCTCCGGATGAGGTAAGTTACGAGTTGCTCGTTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACCTGAGTGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAGATATATGATGCAGTAATTCAATCCTCTCAAGTTCATGGAGCCTCCATTGATATAAGATTGCTAGGGCCGCGGCCACTCGAGAAGAACAAGAGTTCATAG

mRNA sequence

ATGCATGTTCATAGTAATTGGTGTCCAATTAGTAGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGAATAAATCGTGTTGGGTTTTCTGATAGTTGTTATGGAAATGGGAATTTCTCTTTGATTTCCTTTAATTTTAGTGTTTTGAGAAGTGGATTTTGTTGCGAGACTTCGAGATTTGAATGTATCCGTGAGTTCCGCCATGGCTGTTCTTCTAAGCTTAGAGTTGCTCCGTTAATGAAGCCGAAGAGGAATTCCCTTGGGGCTTGGTTTTTATTTGCTTGGGCTGTTGAACAGCCAACGATTGATGATGAAATTGCTAGGCTTGAATCAAATTCTAGCGATGATTTTCCTGAGAGTAGTTTAGATTGGGATGTATATGATCCTGGCAATGTTAATAGTGAAAATAGTCATGGAAGAGGAAATTTTAAAGACGAGGAAGGAATGGAGGGAGAGGGAGATGTTAGGGTCGATGTTCGTGCACTAGCACGTCGGTTGCAGCTTGCTCGAACGGCGGATGATGTTGAGGAGCTTCTCAAGGATGTCGGCGTATTGCCTCTTCAAGTGTTCTCATCCATTATTAGAGGTTTTGGGAGGAACAGAAGGTTGGAATGTGCAGTGGCTCTTGTTGAATGGCTTAAGAAAAAGAAGATTGAAACTAATGGTCTTATTGCGCCGAATTTGTTCATATACAACAGTCTTCTCGGTGCAGTTAAGCAATCCGGAGAGTTTTCGAAAATGGAAGATGTCTTGACTGATATGGCACAGGAAGGAATCGTTTCAAATGTTGTTACGTACAATACGATTATGTCCATTTACTTGGAACAAGGACTAGCTATAAAATCTCTTGGCATTCTCGAAGAGATGCCGAGGAAAGGCCTAACTCCATGTCCTGTGTCCTACTCTACAGCATTACAAGCATACCGAAGGATGAATGATGGGAATGGCGCTTTAAAGTTTATGATTGAGTTGAGAGAAAGATATCGTAATGGCGAGTTAGTGAAAGATGATAATGTAGATTGGGCTGATAAGTTCTTGAAGCTCGAAAAGTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGACGACCCCGCAAACACAAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCGGGATTGTCGCTTGATCGTGTTGAAGAAGAACGACTTATTTGGGCTTGTACGTGTGCCGAACACCATAATGTAGCGAAAGAATTGTACTACAGGATAAGAGAAAAGCAATGTAGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATCTGTTGGAGAAAGGACCAAAACCAAATAATTTGTCAAATGAACTAATTGTTTCTCACTTCAATGTTCTTCTCACAGCTGCGAAGAAACGAGGAATTTGGAGATGGGGCGTTAGGTTACTCGACAAAATGGAAGAGAAAGGTCTTAAACCCGGAATTCGGGAATGGAATGCCGTTCTTGTTGCCTGTTCCAGAGCTGCAGAAACGTCGGCAGCTATAGATATCTTTAGGAGAATGGTCGAAAAAGGTGAAAAACCGACTGTCCTTTCATATGGGGCATTACTAAGCGCTCTCGAAAAGGGAAAGCTCTACGACGAAGCACGTAGCGTCTGGGATCATATGATTAAAGTTGGGGTGGAGCCCAACATCTATGCCTATACAACCATGACTTCGATTTTCACTGGCCAAGGAAAGTTTAATATGGTTGATGTCACTCTCAATGATATGGTTACATCAGGCATTGAGCCAACAGTCGTCACATACAACGCGATAATTACGGGATGTGTCCGTAACGGGATGAGCAGTGTAGCTTACGAGTGGTTTCACCGCATGAAAGCTCGAAATATCTCTCCGGATGAGGTAAGTTACGAGTTGCTCGTTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACCTGAGTGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAGATATATGATGCAGTAATTCAATCCTCTCAAGTTCATGGAGCCTCCATTGATATAAGATTGCTAGGGCCGCGGCCACTCGAGAAGAACAAGAGTTCATAG

Coding sequence (CDS)

ATGCATGTTCATAGTAATTGGTGTCCAATTAGTAGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGAATAAATCGTGTTGGGTTTTCTGATAGTTGTTATGGAAATGGGAATTTCTCTTTGATTTCCTTTAATTTTAGTGTTTTGAGAAGTGGATTTTGTTGCGAGACTTCGAGATTTGAATGTATCCGTGAGTTCCGCCATGGCTGTTCTTCTAAGCTTAGAGTTGCTCCGTTAATGAAGCCGAAGAGGAATTCCCTTGGGGCTTGGTTTTTATTTGCTTGGGCTGTTGAACAGCCAACGATTGATGATGAAATTGCTAGGCTTGAATCAAATTCTAGCGATGATTTTCCTGAGAGTAGTTTAGATTGGGATGTATATGATCCTGGCAATGTTAATAGTGAAAATAGTCATGGAAGAGGAAATTTTAAAGACGAGGAAGGAATGGAGGGAGAGGGAGATGTTAGGGTCGATGTTCGTGCACTAGCACGTCGGTTGCAGCTTGCTCGAACGGCGGATGATGTTGAGGAGCTTCTCAAGGATGTCGGCGTATTGCCTCTTCAAGTGTTCTCATCCATTATTAGAGGTTTTGGGAGGAACAGAAGGTTGGAATGTGCAGTGGCTCTTGTTGAATGGCTTAAGAAAAAGAAGATTGAAACTAATGGTCTTATTGCGCCGAATTTGTTCATATACAACAGTCTTCTCGGTGCAGTTAAGCAATCCGGAGAGTTTTCGAAAATGGAAGATGTCTTGACTGATATGGCACAGGAAGGAATCGTTTCAAATGTTGTTACGTACAATACGATTATGTCCATTTACTTGGAACAAGGACTAGCTATAAAATCTCTTGGCATTCTCGAAGAGATGCCGAGGAAAGGCCTAACTCCATGTCCTGTGTCCTACTCTACAGCATTACAAGCATACCGAAGGATGAATGATGGGAATGGCGCTTTAAAGTTTATGATTGAGTTGAGAGAAAGATATCGTAATGGCGAGTTAGTGAAAGATGATAATGTAGATTGGGCTGATAAGTTCTTGAAGCTCGAAAAGTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGACGACCCCGCAAACACAAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCGGGATTGTCGCTTGATCGTGTTGAAGAAGAACGACTTATTTGGGCTTGTACGTGTGCCGAACACCATAATGTAGCGAAAGAATTGTACTACAGGATAAGAGAAAAGCAATGTAGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATCTGTTGGAGAAAGGACCAAAACCAAATAATTTGTCAAATGAACTAATTGTTTCTCACTTCAATGTTCTTCTCACAGCTGCGAAGAAACGAGGAATTTGGAGATGGGGCGTTAGGTTACTCGACAAAATGGAAGAGAAAGGTCTTAAACCCGGAATTCGGGAATGGAATGCCGTTCTTGTTGCCTGTTCCAGAGCTGCAGAAACGTCGGCAGCTATAGATATCTTTAGGAGAATGGTCGAAAAAGGTGAAAAACCGACTGTCCTTTCATATGGGGCATTACTAAGCGCTCTCGAAAAGGGAAAGCTCTACGACGAAGCACGTAGCGTCTGGGATCATATGATTAAAGTTGGGGTGGAGCCCAACATCTATGCCTATACAACCATGACTTCGATTTTCACTGGCCAAGGAAAGTTTAATATGGTTGATGTCACTCTCAATGATATGGTTACATCAGGCATTGAGCCAACAGTCGTCACATACAACGCGATAATTACGGGATGTGTCCGTAACGGGATGAGCAGTGTAGCTTACGAGTGGTTTCACCGCATGAAAGCTCGAAATATCTCTCCGGATGAGGTAAGTTACGAGTTGCTCGTTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACCTGAGTGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAGATATATGATGCAGTAATTCAATCCTCTCAAGTTCATGGAGCCTCCATTGATATAAGATTGCTAGGGCCGCGGCCACTCGAGAAGAACAAGAGTTCATAG

Protein sequence

MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFCCETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSSDDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS

Homology

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BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot
Match: Q9SNB7 (Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPE1 PE=1 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 6.8e-221
Identity = 383/638 (60.03%), Postives = 485/638 (76.02%), Query Frame = 0


Query: 77  SSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSSDDFPESSLDWDVYDPG 136
           SS  +V  L +PKR+ LG+ F   WA EQ  +  E+   E ++ D               
Sbjct: 60  SSNRKVLFLCEPKRSLLGSSFGVGWATEQREL--ELGEEEVSTED--------------- 119

Query: 137 NVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVF 196
            ++S N   + N            +RVDVR LA  L+ A+TADDV+ +LKD G LPLQVF
Sbjct: 120 -LSSANGGEKNN------------LRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVF 179

Query: 197 SSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDV 256
            ++I+GFG+++RL+ AVA+V+WLK+KK E+ G+I PNLFIYNSLLGA++  GE    E +
Sbjct: 180 CAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGE---AEKI 239

Query: 257 LTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRR 316
           L DM +EGIV N+VTYNT+M IY+E+G  +K+LGIL+    KG  P P++YSTAL  YRR
Sbjct: 240 LKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRR 299

Query: 317 MNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPA 376
           M DG GAL+F +ELRE+Y   E+  D   DW  +F+KLE F  R+CYQVMR WLVKDD  
Sbjct: 300 MEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 359

Query: 377 NTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNH 436
            T+VL+LL  MD AG+   R E ERLIWACT  EH+ V KELY RIRE+   ISLSVCNH
Sbjct: 360 TTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNH 419

Query: 437 VIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLL 496
           +IWLMGKAKKWWAALEIYEDLL++GP+PNNLS EL+VSHFN+LL+AA KRGIWRWGVRLL
Sbjct: 420 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 479

Query: 497 DKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKG 556
           +KME+KGLKP  R WNAVLVACS+A+ET+AAI IF+ MV+ GEKPTV+SYGALLSALEKG
Sbjct: 480 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 539

Query: 557 KLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTY 616
           KLYDEA  VW+HMIKVG+EPN+YAYTTM S+ TGQ KFN++D  L +M + GIEP+VVT+
Sbjct: 540 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 599

Query: 617 NAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKD 676
           NA+I+GC RNG+S VAYEWFHRMK+ N+ P+E++YE+L+EALA + KPRLAYEL++ A++
Sbjct: 600 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQN 659

Query: 677 EGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNK 715
           EGL LSSK YDAV++S++ +GA+ID+ LLGPRP +KN+
Sbjct: 660 EGLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664

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BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-32
Identity = 123/540 (22.78%), Postives = 245/540 (45.37%), Query Frame = 0


Query: 142 NSHGRGNFKDEEGMEGEGDVRVD--VRALARRLQLARTADDVEELLKDVGVLPLQVFSSI 201
           NS+G G++          DV  +  +R + R  +L      +E ++    V  +   +++
Sbjct: 84  NSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTL 143

Query: 202 IRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTD 261
           IRGF R  +   A  ++E L     E +G + P++  YN ++    ++GE +    VL  
Sbjct: 144 IRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSVLDR 203

Query: 262 MAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMND 321
           M+   +  +VVTYNTI+    + G   +++ +L+ M ++   P  ++Y+  ++A  R + 
Sbjct: 204 MS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 263

Query: 322 GNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTK 381
              A+K + E+R+R    ++                     V Y V+   + K+   + +
Sbjct: 264 VGHAMKLLDEMRDRGCTPDV---------------------VTYNVLVNGICKEGRLD-E 323

Query: 382 VLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIW 441
            ++ L +M  +G   + +    ++ +         A++L   +  K  S S+   N +I 
Sbjct: 324 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 383

Query: 442 LMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKM 501
            + +      A++I E + + G +PN+LS       +N LL    K       +  L++M
Sbjct: 384 FLCRKGLLGRAIDILEKMPQHGCQPNSLS-------YNPLLHGFCKEKKMDRAIEYLERM 443

Query: 502 EEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLY 561
             +G  P I  +N +L A  +  +   A++I  ++  KG  P +++Y  ++  L K    
Sbjct: 444 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 503

Query: 562 DEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAI 621
            +A  + D M    ++P+   Y+++    + +GK +      ++    GI P  VT+N+I
Sbjct: 504 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 563

Query: 622 ITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGL 680
           + G  ++  +  A ++   M  R   P+E SY +L+E LA EG  + A EL     ++GL
Sbjct: 564 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585

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BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.5e-31
Identity = 124/551 (22.50%), Postives = 241/551 (43.74%), Query Frame = 0


Query: 160 DVRVDVRALARRLQLARTADDVEELLKDVG-VLPLQVFSSIIRGFGRNRRLECAVALVEW 219
           D+ +     AR+L   R A +   LL+  G  + +   +++I    R   +E A     W
Sbjct: 169 DLLIRTYVQARKL---REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA-----W 228

Query: 220 LKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSI 279
              ++I  +G +  N++  N ++ A+ + G+  K+   L+ + ++G+  ++VTYNT++S 
Sbjct: 229 GVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 288

Query: 280 YLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALKFMIE--------- 339
           Y  +GL  ++  ++  MP KG +P   +Y+T +    +      A +   E         
Sbjct: 289 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 348

Query: 340 -------LRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQ 399
                  L E  + G++V+ + V         +     VC+  M     +    + K L 
Sbjct: 349 STTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLD-KALM 408

Query: 400 LLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLMG 459
               + +AGL  D V    LI         +VA  L   + ++ C++ +   N ++  + 
Sbjct: 409 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 468

Query: 460 KAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEK 519
           K K    A +++ ++ E+   P++ +         +L+    K G  +  + L  KM+EK
Sbjct: 469 KRKMLGEADKLFNEMTERALFPDSYT-------LTILIDGHCKLGNLQNAMELFQKMKEK 528

Query: 520 GLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSAL-EKGKLYDE 579
            ++  +  +N +L    +  +   A +I+  MV K   PT +SY  L++AL  KG L  E
Sbjct: 529 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL-AE 588

Query: 580 ARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAIIT 639
           A  VWD MI   ++P +    +M   +   G  +  +  L  M++ G  P  ++YN +I 
Sbjct: 589 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 648

Query: 640 GCVRNGMSSVAYEWFHRMKAR--NISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGL 691
           G VR    S A+    +M+     + PD  +Y  ++    ++ + + A  +     + G+
Sbjct: 649 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 699

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BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot
Match: Q9SH26 (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX=3702 GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.5e-31
Identity = 114/511 (22.31%), Postives = 222/511 (43.44%), Query Frame = 0


Query: 196 FSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMED 255
           +  I+R    + +L+ A+ L   + K +        P++F +N LL A+ +  +F  +  
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSR------PLPSIFEFNKLLSAIAKMKKFDLVIS 112

Query: 256 VLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAY- 315
           +   M + GI  N+ TYN +++ +  +     +L +L +M + G  P  V+ S+ L  Y 
Sbjct: 113 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 172

Query: 316 --RRMNDGNGALKFMIELRERYRNGELV-------------KDDNVDWADKFLKLEKFTR 375
             +R++D    +  M+E+   YR   +                + V   D+ ++      
Sbjct: 173 HGKRISDAVALVDQMVEM--GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 232

Query: 376 RVCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELY 435
            V Y V+   L K    +     LL +M+ A +  + V    +I +     H + A  L+
Sbjct: 233 LVTYGVVVNGLCKRGDIDL-AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 292

Query: 436 YRIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVL 495
             +  K    ++   + +I  +   ++W  A  +  D++E+   PN       V  FN L
Sbjct: 293 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN-------VVTFNAL 352

Query: 496 LTAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGE 555
           + A  K G      +L D+M ++ + P I  +++++           A  +F  M+ K  
Sbjct: 353 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 412

Query: 556 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDV 615
            P V++Y  L++   K K  DE   ++  M + G+  N   YTT+   F      +   +
Sbjct: 413 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 472

Query: 616 TLNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALA 675
               MV+ G+ P ++TYN ++ G  +NG    A   F  ++   + P   +Y +++E + 
Sbjct: 473 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 532

Query: 676 KEGKPRLAYELYLSAKDEGLNLSSKIYDAVI 691
           K GK    ++L+ S   +G+     IY+ +I
Sbjct: 533 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-30
Identity = 120/502 (23.90%), Postives = 218/502 (43.43%), Query Frame = 0


Query: 195 VFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGA-VKQSGEFSKM 254
           VF  +++ + R   ++ A+++V        + +G + P +  YN++L A ++     S  
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVH-----LAQAHGFM-PGVLSYNAVLDATIRSKRNISFA 195

Query: 255 EDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQA 314
           E+V  +M +  +  NV TYN ++  +   G    +L + ++M  KG  P  V+Y+T +  
Sbjct: 196 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 255

Query: 315 Y---RRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWL 374
           Y   R+++DG   L+ M                    A K L+       + Y V+   L
Sbjct: 256 YCKLRKIDDGFKLLRSM--------------------ALKGLE----PNLISYNVVINGL 315

Query: 375 VKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSIS 434
            ++     +V  +L EM++ G SLD V    LI       + + A  ++  +     + S
Sbjct: 316 CREGRMK-EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 375

Query: 435 LSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWR 494
           +     +I  M KA     A+E  + +  +G  PN  +   +V  F+       ++G   
Sbjct: 376 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-------QKGYMN 435

Query: 495 WGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALL 554
              R+L +M + G  P +  +NA++       +   AI +   M EKG  P V+SY  +L
Sbjct: 436 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 495

Query: 555 SALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIE 614
           S   +    DEA  V   M++ G++P+   Y+++   F  Q +         +M+  G+ 
Sbjct: 496 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 555

Query: 615 PTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYEL 674
           P   TY A+I      G    A +  + M  + + PD V+Y +L+  L K+ + R A  L
Sbjct: 556 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 599

Query: 675 YLSAKDEGLNLSSKIYDAVIQS 693
            L    E    S   Y  +I++
Sbjct: 616 LLKLFYEESVPSDVTYHTLIEN 599

[Close]

BLAST of Csor.00g152270.m01 vs. NCBI nr
Match: KAG6581072.1 (Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017801.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1442 bits (3733), Expect = 0.0
Identity = 716/716 (100.00%), Postives = 716/716 (100.00%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC
Sbjct: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS
Sbjct: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD
Sbjct: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL
Sbjct: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716

[Close]

BLAST of Csor.00g152270.m01 vs. NCBI nr
Match: XP_022934968.1 (pentatricopeptide repeat-containing protein At3g46610-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1415 bits (3663), Expect = 0.0
Identity = 704/716 (98.32%), Postives = 708/716 (98.88%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MHVHSNWCPISSSGVELGSYSVVH SWKRINRVGFSDSCYGNGN  LISFNFSVLRSGFC
Sbjct: 1   MHVHSNWCPISSSGVELGSYSVVHSSWKRINRVGFSDSCYGNGNLYLISFNFSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCS KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS 
Sbjct: 61  CETSRFECIREFRHGCS-KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DD PESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD
Sbjct: 121 DDLPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNG IAPNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGRIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGL
Sbjct: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWL GKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLTGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMS+VAYEWFHRMKARNISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSTVAYEWFHRMKARNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. NCBI nr
Match: XP_023528581.1 (pentatricopeptide repeat-containing protein At3g46610-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1407 bits (3641), Expect = 0.0
Identity = 698/716 (97.49%), Postives = 707/716 (98.74%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFN SVLRSGFC
Sbjct: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNLSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCS KLRVAPLMKPKRNSLGAWFLFAW VEQPTIDDEI+R+ESNS 
Sbjct: 61  CETSRFECIREFRHGCS-KLRVAPLMKPKRNSLGAWFLFAWTVEQPTIDDEISRVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DDF ESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDV+VDVRALARRLQLARTADD
Sbjct: 121 DDFRESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVKVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNG IAPNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGRIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGEF KMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGL
Sbjct: 241 LGAVKQSGEFLKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDD+VDWADK LKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDDVDWADKILKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWL KDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLAKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWLMGKA+KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLMGKARKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEAR+VWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARNVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPL+KNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLDKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. NCBI nr
Match: XP_022983201.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita maxima])

HSP 1 Score: 1394 bits (3609), Expect = 0.0
Identity = 695/716 (97.07%), Postives = 702/716 (98.04%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           M VHSNW PISSSGVELGSYSVVHRSWKRIN VGFSDSCYGNGNFSLISFN SVLRSGFC
Sbjct: 1   MLVHSNWYPISSSGVELGSYSVVHRSWKRINCVGFSDSCYGNGNFSLISFNLSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCS KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS 
Sbjct: 61  CETSRFECIREFRHGCS-KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DD PESSLDWDVYDPGNV+SENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD
Sbjct: 121 DDLPESSLDWDVYDPGNVDSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNG I PNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGRIVPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQS EFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGL
Sbjct: 241 LGAVKQSREFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLD VEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDHVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAE SAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAEMSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKA+NISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKAQNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLN SSKIYDAVIQSSQVHGASID+RL GPRPL+KNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNFSSKIYDAVIQSSQVHGASIDVRLXGPRPLDKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. NCBI nr
Match: XP_022934969.1 (pentatricopeptide repeat-containing protein At3g46610-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1248 bits (3230), Expect = 0.0
Identity = 623/631 (98.73%), Postives = 627/631 (99.37%), Query Frame = 0


Query: 86  MKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSSDDFPESSLDWDVYDPGNVNSENSHG 145
           MKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS DD PESSLDWDVYDPGNVNSENSHG
Sbjct: 1   MKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSRDDLPESSLDWDVYDPGNVNSENSHG 60

Query: 146 RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR 205
           RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR
Sbjct: 61  RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR 120

Query: 206 NRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI 265
           NRRLECAVALVEWLKKKKIETNG IAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI
Sbjct: 121 NRRLECAVALVEWLKKKKIETNGRIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI 180

Query: 266 VSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK 325
           VSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK
Sbjct: 181 VSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK 240

Query: 326 FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM 385
           FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM
Sbjct: 241 FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM 300

Query: 386 EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLMGKAK 445
           EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWL GKAK
Sbjct: 301 EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLTGKAK 360

Query: 446 KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK 505
           KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK
Sbjct: 361 KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK 420

Query: 506 PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV 565
           PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV
Sbjct: 421 PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV 480

Query: 566 WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAIITGCVR 625
           WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VTLNDMVTSGIEPTVVTYNAIITGCVR
Sbjct: 481 WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVTLNDMVTSGIEPTVVTYNAIITGCVR 540

Query: 626 NGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI 685
           NGMS+VAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI
Sbjct: 541 NGMSTVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI 600

Query: 686 YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS
Sbjct: 601 YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 631

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL
Match: A0A6J1F973 (pentatricopeptide repeat-containing protein At3g46610-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441977 PE=4 SV=1)

HSP 1 Score: 1415 bits (3663), Expect = 0.0
Identity = 704/716 (98.32%), Postives = 708/716 (98.88%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MHVHSNWCPISSSGVELGSYSVVH SWKRINRVGFSDSCYGNGN  LISFNFSVLRSGFC
Sbjct: 1   MHVHSNWCPISSSGVELGSYSVVHSSWKRINRVGFSDSCYGNGNLYLISFNFSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCS KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS 
Sbjct: 61  CETSRFECIREFRHGCS-KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DD PESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD
Sbjct: 121 DDLPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNG IAPNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGRIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGL
Sbjct: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWL GKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLTGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMS+VAYEWFHRMKARNISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSTVAYEWFHRMKARNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL
Match: A0A6J1J1F6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610-like OS=Cucurbita maxima OX=3661 GN=LOC111481858 PE=4 SV=1)

HSP 1 Score: 1394 bits (3609), Expect = 0.0
Identity = 695/716 (97.07%), Postives = 702/716 (98.04%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           M VHSNW PISSSGVELGSYSVVHRSWKRIN VGFSDSCYGNGNFSLISFN SVLRSGFC
Sbjct: 1   MLVHSNWYPISSSGVELGSYSVVHRSWKRINCVGFSDSCYGNGNFSLISFNLSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
           CETSRFECIREFRHGCS KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS 
Sbjct: 61  CETSRFECIREFRHGCS-KLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           DD PESSLDWDVYDPGNV+SENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD
Sbjct: 121 DDLPESSLDWDVYDPGNVDSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNG I PNLFIYNSL
Sbjct: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGRIVPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQS EFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGL
Sbjct: 241 LGAVKQSREFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR
Sbjct: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLD VEEERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDHVEEERLIWACTCAEHHNVAKELYY 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL
Sbjct: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAE SAAIDIFRRMVEKGEK
Sbjct: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAEMSAAIDIFRRMVEKGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKA+NISPDEVSYELLVEALAK
Sbjct: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKAQNISPDEVSYELLVEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELYLSAKDEGLN SSKIYDAVIQSSQVHGASID+RL GPRPL+KNKSS
Sbjct: 661 EGKPRLAYELYLSAKDEGLNFSSKIYDAVIQSSQVHGASIDVRLXGPRPLDKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL
Match: A0A6J1F430 (pentatricopeptide repeat-containing protein At3g46610-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441977 PE=4 SV=1)

HSP 1 Score: 1248 bits (3230), Expect = 0.0
Identity = 623/631 (98.73%), Postives = 627/631 (99.37%), Query Frame = 0


Query: 86  MKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSSDDFPESSLDWDVYDPGNVNSENSHG 145
           MKPKRNSLGAWFLFAWAVEQPTIDDEIAR+ESNS DD PESSLDWDVYDPGNVNSENSHG
Sbjct: 1   MKPKRNSLGAWFLFAWAVEQPTIDDEIARVESNSRDDLPESSLDWDVYDPGNVNSENSHG 60

Query: 146 RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR 205
           RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR
Sbjct: 61  RGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVFSSIIRGFGR 120

Query: 206 NRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI 265
           NRRLECAVALVEWLKKKKIETNG IAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI
Sbjct: 121 NRRLECAVALVEWLKKKKIETNGRIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGI 180

Query: 266 VSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK 325
           VSNVVTYNTIMSIYLEQGLAIK+LGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK
Sbjct: 181 VSNVVTYNTIMSIYLEQGLAIKALGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALK 240

Query: 326 FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM 385
           FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM
Sbjct: 241 FMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQLLM 300

Query: 386 EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLMGKAK 445
           EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWL GKAK
Sbjct: 301 EMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLTGKAK 360

Query: 446 KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK 505
           KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK
Sbjct: 361 KWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEKGLK 420

Query: 506 PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV 565
           PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV
Sbjct: 421 PGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDEARSV 480

Query: 566 WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAIITGCVR 625
           WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMV+VTLNDMVTSGIEPTVVTYNAIITGCVR
Sbjct: 481 WDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVEVTLNDMVTSGIEPTVVTYNAIITGCVR 540

Query: 626 NGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI 685
           NGMS+VAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI
Sbjct: 541 NGMSTVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGLNLSSKI 600

Query: 686 YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS
Sbjct: 601 YDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 631

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL
Match: A0A0A0LB88 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE=3 SV=1)

HSP 1 Score: 1218 bits (3151), Expect = 0.0
Identity = 606/716 (84.64%), Postives = 654/716 (91.34%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MH  SNWCP S SGVELGSYSVVHRSWKR+   GFSD   GN  FSLISFN SVLRSGFC
Sbjct: 1   MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
            E SRF C  EFRHGCS KLRV PLMK  RNSLGA+ L AWAVEQPTIDDEI R+ESNS 
Sbjct: 61  YENSRFVCNCEFRHGCS-KLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           D  PE  LDWD  D G VN ENSHG G+FKDE  +EG GDVRVDVRALA +LQLARTADD
Sbjct: 121 DGLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           V+++LKD+  LPLQVFSS+IRGFGR+RRLECAVALV+WLK+KKIETNG IAPNLFIYNSL
Sbjct: 181 VDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGE S+ME+VLTDMAQEGIVSNVVTYNTIMSIYLEQGLA+K+LGILEEMP+KGL
Sbjct: 241 LGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           T  PVSYSTAL+AYRRM DGNGALKFM+ELRERYRNGE+ KDDNVDWA++FLKLE FTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVK D A+TKVLQLLMEMDKAGLSLDR E ERLIWACTCAEH+NVAKELY+
Sbjct: 361 VCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYF 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQC ISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+S ELIVSHFNVLL
Sbjct: 421 RIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLL+KMEEKGL+PG REWNAVLVACSRAAETSAAIDIFR+MVE+GEK
Sbjct: 481 TAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMI+VGVEPNIYAYTTM S+FTGQGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           +NDMV SGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMK RNISP+EVSYELL+EALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELY+ AKDEGLNLSSK+YDAVI+SSQ++GAS++I+LLG RP ++NKSS
Sbjct: 661 EGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL
Match: A0A5D3E368 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00640 PE=3 SV=1)

HSP 1 Score: 1210 bits (3131), Expect = 0.0
Identity = 607/716 (84.78%), Postives = 648/716 (90.50%), Query Frame = 0


Query: 1   MHVHSNWCPISSSGVELGSYSVVHRSWKRINRVGFSDSCYGNGNFSLISFNFSVLRSGFC 60
           MHV SNWCP S SGV+LGSYSVVHRSWKRI   GFSD C GN  FSLISFN SVL SGFC
Sbjct: 1   MHVLSNWCPTSCSGVDLGSYSVVHRSWKRIKCFGFSDCCCGNWGFSLISFNLSVLGSGFC 60

Query: 61  CETSRFECIREFRHGCSSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSS 120
            E SRF C  EFRHG S KLRV PLMKP RNSL AW L AW VEQPTI DE+ R+ESNS 
Sbjct: 61  YENSRFVCNCEFRHGYS-KLRVVPLMKPNRNSLEAWCLSAWTVEQPTIGDELPRVESNSR 120

Query: 121 DDFPESSLDWDVYDPGNVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADD 180
           D  PE  LDWD  D  NVN ENSHG G+FKDE  MEG GDVRVDVRALA +LQLARTADD
Sbjct: 121 DGLPERRLDWDGDDDDNVNGENSHGGGSFKDEGEMEGVGDVRVDVRALAAQLQLARTADD 180

Query: 181 VEELLKDVGVLPLQVFSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSL 240
           V+++LKD+  LPLQVFSS+IRGFGR+RRLECAVALV+WLK+KKIETNG IAPNLFIYNSL
Sbjct: 181 VDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSL 240

Query: 241 LGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGL 300
           LGAVKQSGE SKME+VLT+MAQEGIVSNVVTYNTIMSIYLEQGLA K+LGILEEMP+KGL
Sbjct: 241 LGAVKQSGELSKMENVLTEMAQEGIVSNVVTYNTIMSIYLEQGLATKALGILEEMPKKGL 300

Query: 301 TPCPVSYSTALQAYRRMNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRR 360
           T  PVSYSTAL+AYR+M DGNGAL+FM+ELRERY NGE+ KDDNVDWA++FLKLE FTRR
Sbjct: 301 TLSPVSYSTALRAYRKMKDGNGALEFMVELRERYHNGEIAKDDNVDWANEFLKLENFTRR 360

Query: 361 VCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYY 420
           VCYQVMRIWLVK D A+TKVLQLLMEMDKAGLSLDR EEERLIWACTCAEH+NVAKELY 
Sbjct: 361 VCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYI 420

Query: 421 RIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLL 480
           RIREKQC ISLSVCNHVIWLMGKAKKWWAALEIYE+LLEKGPKPNN+S ELIVSHFNVLL
Sbjct: 421 RIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLL 480

Query: 481 TAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEK 540
           TAAKKRGIWRWGVRLL+KMEEKGL+PG REWNAVLVACSRAAETSAAIDIFRRMVE+GEK
Sbjct: 481 TAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRRMVEQGEK 540

Query: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVT 600
           PTVLSYGALLSALEKGKLYDEARSVWDHMI+VGVEPNIYAYTTM S+FT QGKFNMV+VT
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTSQGKFNMVEVT 600

Query: 601 LNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAK 660
           +NDMV SGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMK RNISP+EVSYELL+EALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660

Query: 661 EGKPRLAYELYLSAKDEGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNKSS 716
           EGKPRLAYELY  AKDEGLNLSSKIYDAVI+SSQ++GASIDIRLLG RP +KNKSS
Sbjct: 661 EGKPRLAYELYRRAKDEGLNLSSKIYDAVIESSQLYGASIDIRLLGLRPPDKNKSS 715

[Close]

BLAST of Csor.00g152270.m01 vs. TAIR 10
Match: AT3G46610.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 768.5 bits (1983), Expect = 4.9e-222
Identity = 383/638 (60.03%), Postives = 485/638 (76.02%), Query Frame = 0


Query: 77  SSKLRVAPLMKPKRNSLGAWFLFAWAVEQPTIDDEIARLESNSSDDFPESSLDWDVYDPG 136
           SS  +V  L +PKR+ LG+ F   WA EQ  +  E+   E ++ D               
Sbjct: 60  SSNRKVLFLCEPKRSLLGSSFGVGWATEQREL--ELGEEEVSTED--------------- 119

Query: 137 NVNSENSHGRGNFKDEEGMEGEGDVRVDVRALARRLQLARTADDVEELLKDVGVLPLQVF 196
            ++S N   + N            +RVDVR LA  L+ A+TADDV+ +LKD G LPLQVF
Sbjct: 120 -LSSANGGEKNN------------LRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVF 179

Query: 197 SSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDV 256
            ++I+GFG+++RL+ AVA+V+WLK+KK E+ G+I PNLFIYNSLLGA++  GE    E +
Sbjct: 180 CAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGE---AEKI 239

Query: 257 LTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRR 316
           L DM +EGIV N+VTYNT+M IY+E+G  +K+LGIL+    KG  P P++YSTAL  YRR
Sbjct: 240 LKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRR 299

Query: 317 MNDGNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPA 376
           M DG GAL+F +ELRE+Y   E+  D   DW  +F+KLE F  R+CYQVMR WLVKDD  
Sbjct: 300 MEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 359

Query: 377 NTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNH 436
            T+VL+LL  MD AG+   R E ERLIWACT  EH+ V KELY RIRE+   ISLSVCNH
Sbjct: 360 TTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNH 419

Query: 437 VIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLL 496
           +IWLMGKAKKWWAALEIYEDLL++GP+PNNLS EL+VSHFN+LL+AA KRGIWRWGVRLL
Sbjct: 420 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 479

Query: 497 DKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKG 556
           +KME+KGLKP  R WNAVLVACS+A+ET+AAI IF+ MV+ GEKPTV+SYGALLSALEKG
Sbjct: 480 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 539

Query: 557 KLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTY 616
           KLYDEA  VW+HMIKVG+EPN+YAYTTM S+ TGQ KFN++D  L +M + GIEP+VVT+
Sbjct: 540 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 599

Query: 617 NAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKD 676
           NA+I+GC RNG+S VAYEWFHRMK+ N+ P+E++YE+L+EALA + KPRLAYEL++ A++
Sbjct: 600 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQN 659

Query: 677 EGLNLSSKIYDAVIQSSQVHGASIDIRLLGPRPLEKNK 715
           EGL LSSK YDAV++S++ +GA+ID+ LLGPRP +KN+
Sbjct: 660 EGLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664

[Close]

BLAST of Csor.00g152270.m01 vs. TAIR 10
Match: AT5G14350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-38
Identity = 91/200 (45.50%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 443 KAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEK 502
           K +   +ALE+YEDLL++GP+PNNLS E                      +RL       
Sbjct: 95  KLRNGGSALEMYEDLLDEGPEPNNLSYE---------------------PMRL------- 154

Query: 503 GLKP-GIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLYDE 562
            L+P  I++W                              TV S+GALLSALEKGKLYDE
Sbjct: 155 QLRPKSIKQW----------------------------LTTVKSHGALLSALEKGKLYDE 214

Query: 563 ARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSG-IEPTVVTYNAII 622
              VW+HM+KVG+EPN+YAYTTM S+ TGQ K N++D  L +M + G I+P+VVTYNA+I
Sbjct: 215 VLRVWNHMVKVGIEPNLYAYTTMASVLTGQQKLNLLDTLLKEMPSKGIIKPSVVTYNAVI 238

Query: 623 TGCVRNGMSSVAYEWFHRMK 641
           +GC RNG+S VAYEWFHRM+
Sbjct: 275 SGCTRNGLSGVAYEWFHRMR 238

[Close]

BLAST of Csor.00g152270.m01 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 2.2e-33
Identity = 123/540 (22.78%), Postives = 245/540 (45.37%), Query Frame = 0


Query: 142 NSHGRGNFKDEEGMEGEGDVRVD--VRALARRLQLARTADDVEELLKDVGVLPLQVFSSI 201
           NS+G G++          DV  +  +R + R  +L      +E ++    V  +   +++
Sbjct: 84  NSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTL 143

Query: 202 IRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTD 261
           IRGF R  +   A  ++E L     E +G + P++  YN ++    ++GE +    VL  
Sbjct: 144 IRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSVLDR 203

Query: 262 MAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMND 321
           M+   +  +VVTYNTI+    + G   +++ +L+ M ++   P  ++Y+  ++A  R + 
Sbjct: 204 MS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 263

Query: 322 GNGALKFMIELRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTK 381
              A+K + E+R+R    ++                     V Y V+   + K+   + +
Sbjct: 264 VGHAMKLLDEMRDRGCTPDV---------------------VTYNVLVNGICKEGRLD-E 323

Query: 382 VLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIW 441
            ++ L +M  +G   + +    ++ +         A++L   +  K  S S+   N +I 
Sbjct: 324 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 383

Query: 442 LMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKM 501
            + +      A++I E + + G +PN+LS       +N LL    K       +  L++M
Sbjct: 384 FLCRKGLLGRAIDILEKMPQHGCQPNSLS-------YNPLLHGFCKEKKMDRAIEYLERM 443

Query: 502 EEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSALEKGKLY 561
             +G  P I  +N +L A  +  +   A++I  ++  KG  P +++Y  ++  L K    
Sbjct: 444 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 503

Query: 562 DEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAI 621
            +A  + D M    ++P+   Y+++    + +GK +      ++    GI P  VT+N+I
Sbjct: 504 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 563

Query: 622 ITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGL 680
           + G  ++  +  A ++   M  R   P+E SY +L+E LA EG  + A EL     ++GL
Sbjct: 564 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585

[Close]

BLAST of Csor.00g152270.m01 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 2.5e-32
Identity = 124/551 (22.50%), Postives = 241/551 (43.74%), Query Frame = 0


Query: 160 DVRVDVRALARRLQLARTADDVEELLKDVG-VLPLQVFSSIIRGFGRNRRLECAVALVEW 219
           D+ +     AR+L   R A +   LL+  G  + +   +++I    R   +E A     W
Sbjct: 169 DLLIRTYVQARKL---REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA-----W 228

Query: 220 LKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMEDVLTDMAQEGIVSNVVTYNTIMSI 279
              ++I  +G +  N++  N ++ A+ + G+  K+   L+ + ++G+  ++VTYNT++S 
Sbjct: 229 GVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 288

Query: 280 YLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAYRRMNDGNGALKFMIE--------- 339
           Y  +GL  ++  ++  MP KG +P   +Y+T +    +      A +   E         
Sbjct: 289 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 348

Query: 340 -------LRERYRNGELVKDDNVDWADKFLKLEKFTRRVCYQVMRIWLVKDDPANTKVLQ 399
                  L E  + G++V+ + V         +     VC+  M     +    + K L 
Sbjct: 349 STTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLD-KALM 408

Query: 400 LLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELYYRIREKQCSISLSVCNHVIWLMG 459
               + +AGL  D V    LI         +VA  L   + ++ C++ +   N ++  + 
Sbjct: 409 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 468

Query: 460 KAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVLLTAAKKRGIWRWGVRLLDKMEEK 519
           K K    A +++ ++ E+   P++ +         +L+    K G  +  + L  KM+EK
Sbjct: 469 KRKMLGEADKLFNEMTERALFPDSYT-------LTILIDGHCKLGNLQNAMELFQKMKEK 528

Query: 520 GLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGEKPTVLSYGALLSAL-EKGKLYDE 579
            ++  +  +N +L    +  +   A +I+  MV K   PT +SY  L++AL  KG L  E
Sbjct: 529 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL-AE 588

Query: 580 ARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDVTLNDMVTSGIEPTVVTYNAIIT 639
           A  VWD MI   ++P +    +M   +   G  +  +  L  M++ G  P  ++YN +I 
Sbjct: 589 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 648

Query: 640 GCVRNGMSSVAYEWFHRMKAR--NISPDEVSYELLVEALAKEGKPRLAYELYLSAKDEGL 691
           G VR    S A+    +M+     + PD  +Y  ++    ++ + + A  +     + G+
Sbjct: 649 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 699

[Close]

BLAST of Csor.00g152270.m01 vs. TAIR 10
Match: AT1G63400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 3.2e-32
Identity = 114/511 (22.31%), Postives = 222/511 (43.44%), Query Frame = 0


Query: 196 FSSIIRGFGRNRRLECAVALVEWLKKKKIETNGLIAPNLFIYNSLLGAVKQSGEFSKMED 255
           +  I+R    + +L+ A+ L   + K +        P++F +N LL A+ +  +F  +  
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSR------PLPSIFEFNKLLSAIAKMKKFDLVIS 112

Query: 256 VLTDMAQEGIVSNVVTYNTIMSIYLEQGLAIKSLGILEEMPRKGLTPCPVSYSTALQAY- 315
           +   M + GI  N+ TYN +++ +  +     +L +L +M + G  P  V+ S+ L  Y 
Sbjct: 113 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 172

Query: 316 --RRMNDGNGALKFMIELRERYRNGELV-------------KDDNVDWADKFLKLEKFTR 375
             +R++D    +  M+E+   YR   +                + V   D+ ++      
Sbjct: 173 HGKRISDAVALVDQMVEM--GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 232

Query: 376 RVCYQVMRIWLVKDDPANTKVLQLLMEMDKAGLSLDRVEEERLIWACTCAEHHNVAKELY 435
            V Y V+   L K    +     LL +M+ A +  + V    +I +     H + A  L+
Sbjct: 233 LVTYGVVVNGLCKRGDIDL-AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 292

Query: 436 YRIREKQCSISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSNELIVSHFNVL 495
             +  K    ++   + +I  +   ++W  A  +  D++E+   PN       V  FN L
Sbjct: 293 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN-------VVTFNAL 352

Query: 496 LTAAKKRGIWRWGVRLLDKMEEKGLKPGIREWNAVLVACSRAAETSAAIDIFRRMVEKGE 555
           + A  K G      +L D+M ++ + P I  +++++           A  +F  M+ K  
Sbjct: 353 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 412

Query: 556 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVEPNIYAYTTMTSIFTGQGKFNMVDV 615
            P V++Y  L++   K K  DE   ++  M + G+  N   YTT+   F      +   +
Sbjct: 413 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 472

Query: 616 TLNDMVTSGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKARNISPDEVSYELLVEALA 675
               MV+ G+ P ++TYN ++ G  +NG    A   F  ++   + P   +Y +++E + 
Sbjct: 473 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 532

Query: 676 KEGKPRLAYELYLSAKDEGLNLSSKIYDAVI 691
           K GK    ++L+ S   +G+     IY+ +I
Sbjct: 533 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

The following BLAST results are available for this feature:

BLAST of Csor.00g152270.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB7	6.8e-221	60.03	Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q3EDF8	3.1e-32	22.78	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q9LFC5	3.5e-31	22.50	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX...	[more]
Q9SH26	4.5e-31	22.31	Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	6.5e-30	23.90	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]

BLAST of Csor.00g152270.m01 vs. NCBI nr


Match Name	Identity	Description
KAG6581072.1	100.00	Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022934968.1	98.32	pentatricopeptide repeat-containing protein At3g46610-like isoform X1 [Cucurbita...	[more]
XP_023528581.1	97.49	pentatricopeptide repeat-containing protein At3g46610-like isoform X1 [Cucurbita...	[more]
XP_022983201.1	97.07	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610-like ...	[more]
XP_022934969.1	98.73	pentatricopeptide repeat-containing protein At3g46610-like isoform X2 [Cucurbita...	[more]

BLAST of Csor.00g152270.m01 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1F973	98.32	pentatricopeptide repeat-containing protein At3g46610-like isoform X1 OS=Cucurbi...	[more]
A0A6J1J1F6	97.07	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610-like ...	[more]
A0A6J1F430	98.73	pentatricopeptide repeat-containing protein At3g46610-like isoform X2 OS=Cucurbi...	[more]
A0A0A0LB88	84.64	PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE...	[more]
A0A5D3E368	84.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Csor.00g152270.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46610.1	4.9e-222	60.03	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G14350.1	1.0e-38	45.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	2.2e-33	22.78	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G01110.1	2.5e-32	22.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63400.1	3.2e-32	22.31	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 494..553 e-value: 5.3E-10 score: 39.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 236..265 e-value: 0.15 score: 12.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 268..314 e-value: 8.1E-8 score: 32.4 coord: 611..660 e-value: 5.3E-14 score: 52.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 270..302 e-value: 0.0012 score: 16.9 coord: 614..648 e-value: 2.4E-9 score: 34.8 coord: 511..542 e-value: 4.7E-5 score: 21.3 coord: 545..578 e-value: 1.4E-5 score: 23.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 268..302 score: 11.191545
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 612..646 score: 11.860184
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 542..576 score: 10.577712
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 577..611 score: 8.61564
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 647..681 score: 9.371969
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 233..267 score: 9.240434
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 472..506 score: 8.70333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 507..541 score: 9.865228
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 557..702 e-value: 4.3E-32 score: 113.8 coord: 354..471 e-value: 1.1E-8 score: 36.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 161..353 e-value: 1.1E-24 score: 89.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 472..556 e-value: 2.9E-16 score: 61.3
None	No IPR available	PANTHER	PTHR47940	OS12G0283900 PROTEIN	coord: 10..715

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g152270	Csor.00g152270	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g152270.m01.CDS01	Csor.00g152270.m01.CDS01	CDS

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g152270.m01.single01	Csor.00g152270.m01.single01	single

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g152270.m01.stop_codon01	Csor.00g152270.m01.stop_codon01	stop_codon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g152270.m01.start_codon01	Csor.00g152270.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g152270.m01	Csor.00g152270.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding