
Csor.00g143820.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAACAAAACTTGGTTTCCCTCTTTCTCATCGCCGCAATCTTATTGTGTTGCCAAGCTCATGCATCTGACGTCTGCGACAAAGCAGAGTATGTGGATCTTTGCAAGTCCGTTGTGAAAGGCGCCACCGATCCCAAAGCGGCGATCAAGACATCCCTCGAGTTTCTGTTGTCCGAAACACAACGCCTCAAAGCATCTAGCGGGAAGTTCAAGAATTCGCAGTTCATTGATGTGTGCACAGAAAACTATGACTCTGCCATTGATGACCTCAACAATAGCCTCAAGAATTTGCAGAGCAACGACATAGCCAGCCTTAAAATCACCCTCTCCGGATCCTTATCCTTCTACGAAACCTGCAACGATGCGGTGGCCGAAGGTGGCAAGGGTGTCGTGCAGGTGGCTTCAAAGCTTGTGAAAAAAGATAATAAGCTTAAACATATAGCTGCCAATGCCTTGCACTTCGCTACTTTGTTGAAGTGA ATGGCTCAACAAAACTTGGTTTCCCTCTTTCTCATCGCCGCAATCTTATTGTGTTGCCAAGCTCATGCATCTGACGTCTGCGACAAAGCAGAGTATGTGGATCTTTGCAAGTCCGTTGTGAAAGGCGCCACCGATCCCAAAGCGGCGATCAAGACATCCCTCGAGTTTCTGTTGTCCGAAACACAACGCCTCAAAGCATCTAGCGGGAAGTTCAAGAATTCGCAGTTCATTGATGTGTGCACAGAAAACTATGACTCTGCCATTGATGACCTCAACAATAGCCTCAAGAATTTGCAGAGCAACGACATAGCCAGCCTTAAAATCACCCTCTCCGGATCCTTATCCTTCTACGAAACCTGCAACGATGCGGTGGCCGAAGGTGGCAAGGGTGTCGTGCAGGTGGCTTCAAAGCTTGTGAAAAAAGATAATAAGCTTAAACATATAGCTGCCAATGCCTTGCACTTCGCTACTTTGTTGAAGTGA ATGGCTCAACAAAACTTGGTTTCCCTCTTTCTCATCGCCGCAATCTTATTGTGTTGCCAAGCTCATGCATCTGACGTCTGCGACAAAGCAGAGTATGTGGATCTTTGCAAGTCCGTTGTGAAAGGCGCCACCGATCCCAAAGCGGCGATCAAGACATCCCTCGAGTTTCTGTTGTCCGAAACACAACGCCTCAAAGCATCTAGCGGGAAGTTCAAGAATTCGCAGTTCATTGATGTGTGCACAGAAAACTATGACTCTGCCATTGATGACCTCAACAATAGCCTCAAGAATTTGCAGAGCAACGACATAGCCAGCCTTAAAATCACCCTCTCCGGATCCTTATCCTTCTACGAAACCTGCAACGATGCGGTGGCCGAAGGTGGCAAGGGTGTCGTGCAGGTGGCTTCAAAGCTTGTGAAAAAAGATAATAAGCTTAAACATATAGCTGCCAATGCCTTGCACTTCGCTACTTTGTTGAAGTGA MAQQNLVSLFLIAAILLCCQAHASDVCDKAEYVDLCKSVVKGATDPKAAIKTSLEFLLSETQRLKASSGKFKNSQFIDVCTENYDSAIDDLNNSLKNLQSNDIASLKITLSGSLSFYETCNDAVAEGGKGVVQVASKLVKKDNKLKHIAANALHFATLLK Homology
BLAST of Csor.00g143820.m01 vs. NCBI nr
Match: KAG6604383.1 (hypothetical protein SDJN03_04992, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303 bits (775), Expect = 2.35e-103 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. NCBI nr
Match: KAG7034534.1 (hypothetical protein SDJN02_04264, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301 bits (771), Expect = 9.57e-103 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. NCBI nr
Match: XP_023543966.1 (pectinesterase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 296 bits (759), Expect = 6.47e-101 Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. NCBI nr
Match: XP_022925674.1 (pectinesterase 3-like [Cucurbita moschata]) HSP 1 Score: 296 bits (757), Expect = 1.30e-100 Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. NCBI nr
Match: XP_022977265.1 (uncharacterized protein LOC111477633 [Cucurbita maxima]) HSP 1 Score: 270 bits (689), Expect = 3.03e-90 Identity = 141/160 (88.12%), Postives = 156/160 (97.50%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. ExPASy TrEMBL
Match: A0A6J1ECV8 (pectinesterase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111433023 PE=4 SV=1) HSP 1 Score: 296 bits (757), Expect = 6.32e-101 Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. ExPASy TrEMBL
Match: A0A6J1ILU1 (uncharacterized protein LOC111477633 OS=Cucurbita maxima OX=3661 GN=LOC111477633 PE=4 SV=1) HSP 1 Score: 270 bits (689), Expect = 1.47e-90 Identity = 141/160 (88.12%), Postives = 156/160 (97.50%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. ExPASy TrEMBL
Match: A0A6J1J7M1 (uncharacterized protein LOC111481993 OS=Cucurbita maxima OX=3661 GN=LOC111481993 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 1.60e-49 Identity = 93/167 (55.69%), Postives = 125/167 (74.85%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. ExPASy TrEMBL
Match: A0A6J1JTP3 (uncharacterized protein LOC111487748 OS=Cucurbita maxima OX=3661 GN=LOC111487748 PE=4 SV=1) HSP 1 Score: 165 bits (418), Expect = 2.58e-49 Identity = 88/160 (55.00%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. ExPASy TrEMBL
Match: A0A6J1F286 (uncharacterized protein LOC111441726 OS=Cucurbita moschata OX=3662 GN=LOC111441726 PE=4 SV=1) HSP 1 Score: 161 bits (407), Expect = 1.50e-47 Identity = 88/167 (52.69%), Postives = 121/167 (72.46%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. TAIR 10
Match: AT1G70540.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15 Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. TAIR 10
Match: AT1G23350.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13 Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. TAIR 10
Match: AT3G36659.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09 Identity = 39/137 (28.47%), Postives = 69/137 (50.36%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. TAIR 10
Match: AT1G02550.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 6.3e-05 Identity = 23/83 (27.71%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Csor.00g143820.m01 vs. TAIR 10
Match: AT3G06830.1 (Plant invertase/pectin methylesterase inhibitor superfamily ) HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04 Identity = 41/150 (27.33%), Postives = 71/150 (47.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following single feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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