Csor.00g138440.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g138440.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	calmodulin-like protein 2
Location	Csor_Chr12: 1479499 .. 1480035 (+)
Sequence length	537
RNA-Seq Expression	Csor.00g138440.m01
Synteny	Csor.00g138440.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTCCAGATTCATTGGGGACTTTTTACAAACAGTTAGTGGGCGATCCCGTGCGGCGGATTCCACCGCTGACGGCGGTGCTCCGAGTCCCCACAGAGTCATCCACGACGACGTACTACTACGGGCGTTGATTACAGTGTTTGGAATGAGGGAAAATGGGAGAATCAAGAAGGAAAAAGCAAAAGGGGTGGTGGAGAAATTGGGGCTTATAAAGAGTGAAGAAGAGAAGGAAGGGTTTGAGCTGCCGGCGGATGGCGGTGGTGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGATGGAGGAGGAAGGGAAACGAAATGAGCTGCTATGGGAAGCTTTTAAGATATTTGATGTGGATGGCGATGGATTCATTGATACGGTTGAGCTGAAAAGAGTGCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGCGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTGGTGAGTTTGAATTAATGATGGGTGTGAAATGTTCTTGA

mRNA sequence

ATGGGTATCTCCAGATTCATTGGGGACTTTTTACAAACAGTTAGTGGGCGATCCCGTGCGGCGGATTCCACCGCTGACGGCGGTGCTCCGAGTCCCCACAGAGTCATCCACGACGACGTACTACTACGGGCGTTGATTACAGTGTTTGGAATGAGGGAAAATGGGAGAATCAAGAAGGAAAAAGCAAAAGGGGTGGTGGAGAAATTGGGGCTTATAAAGAGTGAAGAAGAGAAGGAAGGGTTTGAGCTGCCGGCGGATGGCGGTGGTGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGATGGAGGAGGAAGGGAAACGAAATGAGCTGCTATGGGAAGCTTTTAAGATATTTGATGTGGATGGCGATGGATTCATTGATACGGTTGAGCTGAAAAGAGTGCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGCGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTGGTGAGTTTGAATTAATGATGGGTGTGAAATGTTCTTGA

Coding sequence (CDS)

ATGGGTATCTCCAGATTCATTGGGGACTTTTTACAAACAGTTAGTGGGCGATCCCGTGCGGCGGATTCCACCGCTGACGGCGGTGCTCCGAGTCCCCACAGAGTCATCCACGACGACGTACTACTACGGGCGTTGATTACAGTGTTTGGAATGAGGGAAAATGGGAGAATCAAGAAGGAAAAAGCAAAAGGGGTGGTGGAGAAATTGGGGCTTATAAAGAGTGAAGAAGAGAAGGAAGGGTTTGAGCTGCCGGCGGATGGCGGTGGTGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGATGGAGGAGGAAGGGAAACGAAATGAGCTGCTATGGGAAGCTTTTAAGATATTTGATGTGGATGGCGATGGATTCATTGATACGGTTGAGCTGAAAAGAGTGCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGCGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTGGTGAGTTTGAATTAATGATGGGTGTGAAATGTTCTTGA

Protein sequence

MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS

Homology

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 42  LRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIG-- 101
           L  +  +F    +G+I K + K   + +G++  E E        D  GD     +  G  
Sbjct: 6   LSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSL 65

Query: 102 --EMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVD 161
             EM EE +  E + EAF++FD +GDGFI   EL+ VL  +GL +G  + + +KM+S VD
Sbjct: 66  YQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVD 125

Query: 162 VNLDGKVDFGEFELMM 174
           V+ DG V+F EF+ MM
Sbjct: 126 VDGDGMVNFKEFKQMM 141

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot
Match: Q10LX4 (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica OX=39947 GN=CML27 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 42  LRALITVFGMRENGRIKKEKAKGVVEKLGLIKSE---EEKEGFELPADGG----GDEVAV 101
           LR +  +F    +G I  ++    ++ LGL       E   G  +PA       GD  A+
Sbjct: 32  LRRVFDLFDRNGDGEITLDEMASALDALGLGADRAGLEATVGGYIPAGAAGLRFGDFEAL 91

Query: 102 EEVIG-------EMEEEGKRNE-----LLWEAFKIFDVDGDGFIDTVELKRVLECLGLDK 161
              +G       E EE GK+ E      + EAF++FD DGDGFI   EL+ VL+ LGL +
Sbjct: 92  HRALGDALFGPVEEEEPGKQGEDDDEGDMKEAFRVFDEDGDGFISAAELQAVLKKLGLPE 151

Query: 162 GWGIREIEKMVSVVDVNLDGKVDFGEFELMM 174
              +  +++M+  VD + DG+VDFGEF+ MM
Sbjct: 152 ARNLATVQEMICNVDRDCDGRVDFGEFKCMM 182

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot
Match: Q84UL5 (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 GN=CML32 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 84  PADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKG 143
           P  GGGDE          EEE      + EAFK+FDVDGDGFI   EL+ VL+ LGL + 
Sbjct: 115 PGGGGGDE----------EEE------MREAFKVFDVDGDGFISASELQEVLKKLGLPEA 174

Query: 144 WGIREIEKMVSVVDVNLDGKVDFGEFELMM 174
             +  + +M+  VD N DG+VDFGEF+ MM
Sbjct: 175 GSLATVREMICNVDRNSDGRVDFGEFKSMM 188

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot
Match: Q7XHW4 (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica OX=39947 GN=CML24 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 82  ELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLD 141
           ++P DGGG               G  +E + EAFK+FDVDGDGFI   EL+ VL+ LG+ 
Sbjct: 112 DVPEDGGGG--------------GGGDEEMKEAFKVFDVDGDGFISASELQEVLKKLGMP 171

Query: 142 KGWGIREIEKMVSVVDVNLDGKVDFGEFELMM 174
           +   +  + +M+  VD + DG+VDFGEF+ MM
Sbjct: 172 EAGSLANVREMICNVDRDSDGRVDFGEFKCMM 189

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 38  DDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEV 97
           D   L+ +  +F    +G I  ++    +  LG+   ++E        D  GD     + 
Sbjct: 2   DPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDE 61

Query: 98  IGE-----MEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKM 157
            GE     M+EE +  E + EAF +FD +GDGFI   ELK VL  LGL +G  + + +KM
Sbjct: 62  FGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKM 121

Query: 158 VSVVDVNLDGKVDFGEFELMM 174
           +  VDV+ DG+V++ EF  MM
Sbjct: 122 IKKVDVDGDGRVNYKEFRQMM 142

[Close]

BLAST of Csor.00g138440.m01 vs. NCBI nr
Match: KAG6585405.1 (putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020321.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348 bits (893), Expect = 9.30e-121
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120
           KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Csor.00g138440.m01 vs. NCBI nr
Match: XP_022951438.1 (calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (889), Expect = 3.79e-120
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQTV GRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120
           KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Csor.00g138440.m01 vs. NCBI nr
Match: XP_023002517.1 (calmodulin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 340 bits (873), Expect = 1.04e-117
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQTV GRSRAADS ADGGAPSP RVIHDDVLLRALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSAADGGAPSPCRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120
           KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Csor.00g138440.m01 vs. NCBI nr
Match: XP_038886166.1 (calmodulin-like protein 2 [Benincasa hispida])

HSP 1 Score: 285 bits (729), Expect = 9.29e-96
Identity = 155/179 (86.59%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSR-AADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT  GRSR AA+ST D G   PHR+++DDVLLRALITVFGMRENGRIKK
Sbjct: 1   MGISRFIGDFLQTFGGRSRSAAESTIDDGKTRPHRMVYDDVLLRALITVFGMRENGRIKK 60

Query: 61  EKAKGVVEKLGLIKSEEEKEGFELP-ADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIF 120
           EKAKGVVEKLGLI+SEEEK  FEL  A  GGDEVAVEEVIGE  EEGKRNELL+EAFKIF
Sbjct: 61  EKAKGVVEKLGLIQSEEEKARFELATAAEGGDEVAVEEVIGE--EEGKRNELLYEAFKIF 120

Query: 121 DVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKC 177
           DVDGDGFIDTVELKRVL+CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EFELMMGVKC
Sbjct: 121 DVDGDGFIDTVELKRVLDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 177

[Close]

BLAST of Csor.00g138440.m01 vs. NCBI nr
Match: XP_008445056.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-like protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 1.56e-93
Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAA-DSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT+ GRSRAA +ST D G   P+R+++DDVLLRALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFD 120
           EKAKGVVEKLGLI   EEKE FEL A  GGDEVAVEEVIGE  EEGKRNELL+EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EFELMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL
Match: A0A6J1GHP6 (calmodulin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111454254 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 1.83e-120
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQTV GRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120
           KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL
Match: A0A6J1KJR1 (calmodulin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496334 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 5.05e-118
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQTV GRSRAADS ADGGAPSP RVIHDDVLLRALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSAADGGAPSPCRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120
           KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL
Match: A0A5A7VBM3 (Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003420 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 7.56e-94
Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAA-DSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT+ GRSRAA +ST D G   P+R+++DDVLLRALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFD 120
           EKAKGVVEKLGLI   EEKE FEL A  GGDEVAVEEVIGE  EEGKRNELL+EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EFELMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL
Match: A0A1S3BBS0 (calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103488209 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 7.56e-94
Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAA-DSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT+ GRSRAA +ST D G   P+R+++DDVLLRALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFD 120
           EKAKGVVEKLGLI   EEKE FEL A  GGDEVAVEEVIGE  EEGKRNELL+EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EFELMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL
Match: A0A0A0LP90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376820 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 2.17e-93
Identity = 149/178 (83.71%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTVSGRSRAA-DSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT+ GRSRAA +ST D G   P+R+++DDVLLRALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAVESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFD 120
           EKAKGVVEKLGLI   EEKE FEL A  GGDEVAVEE+IGE  EEGKRNELL+EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEMIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EFELMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Csor.00g138440.m01 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 78.2 bits (191), Expect = 7.5e-15
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 42  LRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIG-- 101
           L  +  +F    +G+I K + K   + +G++  E E        D  GD     +  G  
Sbjct: 6   LSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSL 65

Query: 102 --EMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVD 161
             EM EE +  E + EAF++FD +GDGFI   EL+ VL  +GL +G  + + +KM+S VD
Sbjct: 66  YQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVD 125

Query: 162 VNLDGKVDFGEFELMM 174
           V+ DG V+F EF+ MM
Sbjct: 126 VDGDGMVNFKEFKQMM 141

[Close]

BLAST of Csor.00g138440.m01 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 38  DDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEV 97
           D   L+ +  +F    +G I  ++    +  LG+   ++E        D  GD     + 
Sbjct: 2   DPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDE 61

Query: 98  IGE-----MEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKM 157
            GE     M+EE +  E + EAF +FD +GDGFI   ELK VL  LGL +G  + + +KM
Sbjct: 62  FGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKM 121

Query: 158 VSVVDVNLDGKVDFGEFELMM 174
           +  VDV+ DG+V++ EF  MM
Sbjct: 122 IKKVDVDGDGRVNYKEFRQMM 142

[Close]

BLAST of Csor.00g138440.m01 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 104 EGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGK 163
           +G     L EAF +FD DGDGFI  VEL++VL+ LGL +   I ++EKM+  VD N DG+
Sbjct: 105 DGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGR 164

Query: 164 VDFGEFELMM 174
           VDF EF+ MM
Sbjct: 165 VDFFEFKNMM 174

[Close]

BLAST of Csor.00g138440.m01 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 0


Query: 38  DDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEV 97
           D   L  +  +F    +G+I  ++     + LG+I  E+E        D  GD     E 
Sbjct: 2   DSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEE 61

Query: 98  IGEM-------EEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIE 157
            GE+       +E+    E + EAF +FD +GDGFI   ELK VL  LGL +G  + E  
Sbjct: 62  FGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECR 121

Query: 158 KMVSVVDVNLDGKVDFGEFELMM 174
           KM+  VDV+ DG+V++ EF  MM
Sbjct: 122 KMIMQVDVDGDGRVNYMEFRQMM 144

[Close]

BLAST of Csor.00g138440.m01 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 71.2 bits (173), Expect = 9.2e-13
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 38  DDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIKSEEEK----EGFELPADGGGDEVA 97
           D   L  +  +F    +G+I K++    +E LG+   +++     E  +L  DG  D   
Sbjct: 2   DQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEE 61

Query: 98  VEEVIGEMEEEGKRNELLWEAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMV 157
              +   + EE    E + EAF +FD + DGFI   EL+ VL  LGL +G  + + ++M+
Sbjct: 62  FGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMI 121

Query: 158 SVVDVNLDGKVDFGEFELMM 174
           S VDV+ DG V+F EF+ MM
Sbjct: 122 SKVDVDGDGMVNFKEFKQMM 141

The following BLAST results are available for this feature:

BLAST of Csor.00g138440.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU00	1.1e-13	36.03	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
Q10LX4	1.2e-12	35.10	Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q84UL5	1.2e-12	47.78	Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q7XHW4	2.0e-12	42.39	Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9LNE7	2.0e-12	34.04	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]

BLAST of Csor.00g138440.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585405.1	9.30e-121	100.00	putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022951438.1	3.79e-120	99.44	calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like p...	[more]
XP_023002517.1	1.04e-117	98.31	calmodulin-like protein 2 [Cucurbita maxima]	[more]
XP_038886166.1	9.29e-96	86.59	calmodulin-like protein 2 [Benincasa hispida]	[more]
XP_008445056.1	1.56e-93	84.27	PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-lik...	[more]

BLAST of Csor.00g138440.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHP6	1.83e-120	99.44	calmodulin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111454254 PE=4 SV=...	[more]
A0A6J1KJR1	5.05e-118	98.31	calmodulin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496334 PE=4 SV=1	[more]
A0A5A7VBM3	7.56e-94	84.27	Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BBS0	7.56e-94	84.27	calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103488209 PE=4 SV=1	[more]
A0A0A0LP90	2.17e-93	83.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376820 PE=4 SV=1	[more]

BLAST of Csor.00g138440.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12860.1	7.5e-15	36.03	EF hand calcium-binding protein family	[more]
AT1G05990.1	1.4e-13	34.04	EF hand calcium-binding protein family	[more]
AT5G44460.1	1.9e-13	52.86	calmodulin like 43	[more]
AT4G03290.1	2.4e-13	34.97	EF hand calcium-binding protein family	[more]
AT3G07490.1	9.2e-13	33.57	ARF-GAP domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 110..138 e-value: 0.0074 score: 25.5 coord: 148..176 e-value: 1.1 score: 17.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 113..173 e-value: 1.1E-8 score: 35.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 106..141 score: 14.820255
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 144..178 score: 8.850639
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 113..169 e-value: 9.30138E-14 score: 61.0245
None	No IPR available	GENE3D	1.10.238.10		coord: 11..176 e-value: 4.2E-19 score: 71.2
None	No IPR available	PANTHER	PTHR10891:SF743	CALCIUM-BINDING PROTEIN CML42	coord: 104..174
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 104..174
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 119..131
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 48..173

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g138440	Csor.00g138440	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g138440.m01.CDS01	Csor.00g138440.m01.CDS01	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g138440.m01.start_codon01	Csor.00g138440.m01.start_codon01	start_codon

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g138440.m01.single01	Csor.00g138440.m01.single01	single

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g138440.m01.stop_codon01	Csor.00g138440.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g138440.m01	Csor.00g138440.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding