Csor.00g102150.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g102150.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Histone H2B
Location	Csor_Chr20: 2066383 .. 2066841 (-)
Sequence length	459
RNA-Seq Expression	Csor.00g102150.m01
Synteny	Csor.00g102150.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCTAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCGGCCGCCGAAAAGGCGGTAGAGGAGAAGAAATCAGTCGCGGAGAAAGGACCGGCGGAGAAAAAGCTTAAGGCCGGGAAGAAGCTGCCGAAGGAAAGCGGCGCTGCTGCCGGAGACAAAAAGAAGAAGAGGTCGAAGAAGAGTATAGAGACGTACAAGATCTACATCTTCAAGGTTTTGAAGCAAGTTCATCCGGACATCGGAATTTCCAGCAAGGCCATGGGTATCATGAACAGCTTCATCAATGATATCTTCGAGAAACTCGCTCAGGAGTCTTCTAAGTTGGCTCGCTACAACAAGAAGCCCACCATAACTTCGCGGGAGATTCAGACGGCCGTCAGGCTTGTTCTTCCCGGTGAGTTAGCCAAGCACGCTGTTTCTGAGGGCACCAAGGCCGTGACTAAGTTCACAAGTTCGTAA

mRNA sequence

ATGGCACCTAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCGGCCGCCGAAAAGGCGGTAGAGGAGAAGAAATCAGTCGCGGAGAAAGGACCGGCGGAGAAAAAGCTTAAGGCCGGGAAGAAGCTGCCGAAGGAAAGCGGCGCTGCTGCCGGAGACAAAAAGAAGAAGAGGTCGAAGAAGAGTATAGAGACGTACAAGATCTACATCTTCAAGGTTTTGAAGCAAGTTCATCCGGACATCGGAATTTCCAGCAAGGCCATGGGTATCATGAACAGCTTCATCAATGATATCTTCGAGAAACTCGCTCAGGAGTCTTCTAAGTTGGCTCGCTACAACAAGAAGCCCACCATAACTTCGCGGGAGATTCAGACGGCCGTCAGGCTTGTTCTTCCCGGTGAGTTAGCCAAGCACGCTGTTTCTGAGGGCACCAAGGCCGTGACTAAGTTCACAAGTTCGTAA

Coding sequence (CDS)

ATGGCACCTAAGGCCGAGAAGAAGCCCGCCGAGAAGAAGCCGGCCGCCGAAAAGGCGGTAGAGGAGAAGAAATCAGTCGCGGAGAAAGGACCGGCGGAGAAAAAGCTTAAGGCCGGGAAGAAGCTGCCGAAGGAAAGCGGCGCTGCTGCCGGAGACAAAAAGAAGAAGAGGTCGAAGAAGAGTATAGAGACGTACAAGATCTACATCTTCAAGGTTTTGAAGCAAGTTCATCCGGACATCGGAATTTCCAGCAAGGCCATGGGTATCATGAACAGCTTCATCAATGATATCTTCGAGAAACTCGCTCAGGAGTCTTCTAAGTTGGCTCGCTACAACAAGAAGCCCACCATAACTTCGCGGGAGATTCAGACGGCCGTCAGGCTTGTTCTTCCCGGTGAGTTAGCCAAGCACGCTGTTTCTGAGGGCACCAAGGCCGTGACTAAGTTCACAAGTTCGTAA

Protein sequence

MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 245.4 bits (625), Expect = 4.3e-64
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEKKPA     EEKK+VAEK PAEKK KAGKKLPKE GAAAGDKKKKR KK
Sbjct: 1   MAPKAEKKPAEKKPA-----EEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 241.9 bits (616), Expect = 4.7e-63
Identity = 137/152 (90.13%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPK EKKPAEKKPA EK    K +VAEK PAEKK KAGKKLPKE G+AAG+KKKKRSKK
Sbjct: 1   MAPKGEKKPAEKKPAEEK----KSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEKKPA+EK VEE KS AEK PAEKK KAGKKLPKE+G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3)

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-62
Identity = 139/152 (91.45%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAP+AEKKPAEKKPAAEK VEE KS AEK PAEKK KAGKKLPKE+G A GDKKKK  KK
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot
Match: Q1SWQ1 (Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 238.0 bits (606), Expect = 6.8e-62
Identity = 135/152 (88.82%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPK EKKPAEKKPA EK    K +VAEK PAEKK KAGKKLPKE G+AAG+KKKKRSKK
Sbjct: 1   MAPKGEKKPAEKKPAEEK----KSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESS+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHDVSEGTKAVTKFTSS 148

[Close]

BLAST of Csor.00g102150.m01 vs. NCBI nr
Match: KAG6570722.1 (Histone H2B.6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270 bits (691), Expect = 8.29e-91
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK
Sbjct: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

[Close]

BLAST of Csor.00g102150.m01 vs. NCBI nr
Match: XP_023512034.1 (histone H2B.11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (670), Expect = 1.76e-85
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 6   EKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIETY 65
           EKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIETY
Sbjct: 153 EKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIETY 212

Query: 66  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 125
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA
Sbjct: 213 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 272

Query: 126 VRLVLPGELAKHAVSEGTKAVTKFTSS 152
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 273 VRLVLPGELAKHAVSEGTKAVTKFTSS 299

[Close]

BLAST of Csor.00g102150.m01 vs. NCBI nr
Match: KAF8010716.1 (hypothetical protein BT93_J1378 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 257 bits (656), Expect = 1.86e-85
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKS-VAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSK 60
           MAPKAEKKPAEKKPA+EK  EEKKS VAEKGPAEKK KAGKKLPKESGAAAGDKKKKRSK
Sbjct: 1   MAPKAEKKPAEKKPASEKLAEEKKSAVAEKGPAEKKPKAGKKLPKESGAAAGDKKKKRSK 60

Query: 61  KSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITS 120
           KS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITS
Sbjct: 61  KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 120

Query: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153

[Close]

BLAST of Csor.00g102150.m01 vs. NCBI nr
Match: KAG7010568.1 (Histone H2B.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263 bits (673), Expect = 2.04e-85
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 5   AEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 64
           AEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET
Sbjct: 190 AEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 249

Query: 65  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 124
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 250 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 309

Query: 125 AVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 310 AVRLVLPGELAKHAVSEGTKAVTKFTSS 337

[Close]

BLAST of Csor.00g102150.m01 vs. NCBI nr
Match: XP_022986974.1 (histone H2B.11-like [Cucurbita maxima])

HSP 1 Score: 261 bits (668), Expect = 3.54e-85
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 5   AEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 64
           AEKKPAEKKPAAEK VEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET
Sbjct: 152 AEKKPAEKKPAAEKPVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 211

Query: 65  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 124
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 212 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 271

Query: 125 AVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 272 AVRLVLPGELAKHAVSEGTKAVTKFTSS 299

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL
Match: A0A6J1JHJ9 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111484551 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 1.71e-85
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 5   AEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 64
           AEKKPAEKKPAAEK VEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET
Sbjct: 152 AEKKPAEKKPAAEKPVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIET 211

Query: 65  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 124
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 212 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 271

Query: 125 AVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 272 AVRLVLPGELAKHAVSEGTKAVTKFTSS 299

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL
Match: A0A6J1FVH6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111448469 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 1.71e-85
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 6   EKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKKSIETY 65
           EKKPAEKKPAAEKAVEEKKSVAEKGPAEKK+KAGKKLPKESGAAAGDKKKKRSKKSIETY
Sbjct: 153 EKKPAEKKPAAEKAVEEKKSVAEKGPAEKKIKAGKKLPKESGAAAGDKKKKRSKKSIETY 212

Query: 66  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 125
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA
Sbjct: 213 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 272

Query: 126 VRLVLPGELAKHAVSEGTKAVTKFTSS 152
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 273 VRLVLPGELAKHAVSEGTKAVTKFTSS 299

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL
Match: A0A0A0KHC9 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1)

HSP 1 Score: 255 bits (652), Expect = 3.54e-85
Identity = 142/152 (93.42%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKA+KKPAEKKPA+EK  EEKK+VAEK PAEKK KAGKKLPKE GAAAGDKKKKR+KK
Sbjct: 1   MAPKADKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL
Match: A0A6J1G728 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111451349 PE=3 SV=1)

HSP 1 Score: 255 bits (652), Expect = 3.54e-85
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEK+PAAEK  EEKKSVAEK PAEKK KAGKKLPKE GAAA DKKKKRSKK
Sbjct: 1   MAPKAEKKPAEKRPAAEKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAVDKKKKRSKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

[Close]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL
Match: A0A5D3DK48 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00500 PE=3 SV=1)

HSP 1 Score: 253 bits (647), Expect = 2.05e-84
Identity = 141/152 (92.76%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKA+KKPAEKKPA++K  EEKK+VAEK PAEKK KAGKKLPKE GAAAGDKKKKR KK
Sbjct: 1   MAPKADKKPAEKKPASDKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

[Close]

BLAST of Csor.00g102150.m01 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 7.5e-64
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEKKPA+EK VEE KS AEK PAEKK KAGKKLPKE+G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Csor.00g102150.m01 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 139/152 (91.45%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAP+AEKKPAEKKPAAEK VEE KS AEK PAEKK KAGKKLPKE+G A GDKKKK  KK
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Csor.00g102150.m01 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 231.9 bits (590), Expect = 3.5e-61
Identity = 135/152 (88.82%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAP+AEKKPAEKK AAE+ VEE K+ AEK PAEKK KAGKKLP +    AGDKKKKRSKK
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKA-AEKAPAEKKPKAGKKLPPKE---AGDKKKKRSKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           ++ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Csor.00g102150.m01 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 7.7e-61
Identity = 134/152 (88.16%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKAEKKPAEKKP       E+KS AEK PAEKK KAGKKLPKE+G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPV------EEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Csor.00g102150.m01 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 228.8 bits (582), Expect = 2.9e-60
Identity = 133/152 (87.50%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEKAVEEKKSVAEKGPAEKKLKAGKKLPKESGAAAGDKKKKRSKK 60
           MAPKA KKPAEKKP AEKA  E++ VAEK PAEKK KAGKKLPKE+     +KKKKR KK
Sbjct: 1   MAPKAGKKPAEKKP-AEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  SIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

The following BLAST results are available for this feature:

BLAST of Csor.00g102150.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22582	4.3e-64	91.45	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
Q1S9I9	4.7e-63	90.13	Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
P40283	1.1e-62	91.45	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
O23629	1.8e-62	91.45	Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3	[more]
Q1SWQ1	6.8e-62	88.82	Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]

BLAST of Csor.00g102150.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570722.1	8.29e-91	100.00	Histone H2B.6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023512034.1	1.76e-85	100.00	histone H2B.11 [Cucurbita pepo subsp. pepo]	[more]
KAF8010716.1	1.86e-85	95.42	hypothetical protein BT93_J1378 [Corymbia citriodora subsp. variegata]	[more]
KAG7010568.1	2.04e-85	100.00	Histone H2B.6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022986974.1	3.54e-85	99.32	histone H2B.11-like [Cucurbita maxima]	[more]

BLAST of Csor.00g102150.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHJ9	1.71e-85	99.32	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111484551 PE=3 SV=1	[more]
A0A6J1FVH6	1.71e-85	99.32	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111448469 PE=3 SV=1	[more]
A0A0A0KHC9	3.54e-85	93.42	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1	[more]
A0A6J1G728	3.54e-85	94.74	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111451349 PE=3 SV=1	[more]
A0A5D3DK48	2.05e-84	92.76	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00500 PE...	[more]

BLAST of Csor.00g102150.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59910.1	7.5e-64	91.45	Histone superfamily protein	[more]
AT3G45980.1	1.3e-63	91.45	Histone superfamily protein	[more]
AT1G07790.1	3.5e-61	88.82	Histone superfamily protein	[more]
AT3G46030.1	7.7e-61	88.16	Histone superfamily protein	[more]
AT2G28720.1	2.9e-60	87.50	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 65..83 score: 80.55 coord: 84..104 score: 75.74 coord: 106..123 score: 76.51 coord: 123..136 score: 92.45 coord: 136..149 score: 92.65
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 55..151 e-value: 6.3E-73 score: 258.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..152
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 120..142
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 4..128 e-value: 1.3E-22 score: 80.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 26..152 e-value: 3.5E-58 score: 197.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 38..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	PANTHER	PTHR23428:SF294	HISTONE H2B.1-RELATED	coord: 5..152

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g102150	Csor.00g102150	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g102150.m01.CDS01	Csor.00g102150.m01.CDS01	CDS

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g102150.m01.single01	Csor.00g102150.m01.single01	single

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g102150.m01.stop_codon01	Csor.00g102150.m01.stop_codon01	stop_codon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g102150.m01.start_codon01	Csor.00g102150.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g102150.m01	Csor.00g102150.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity