Csor.00g057590.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g057590.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	nuclear pore complex protein NUP58-like
Location	Csor_Chr03: 7528520 .. 7532235 (-)
Sequence length	1482
RNA-Seq Expression	Csor.00g057590.m01
Synteny	Csor.00g057590.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGTATGTGCTTTTATACTCGCTTTGAAACTTGTTGCTCTGTCTTGTTTTTTATCTTAATTGTTTGGGTTGAAGTTTAAAAGATATTGGGCAAGAAGTAATATTTCGAGTCTTTGATGGGTTTCTGCGAAGAAATGCATTTTTGTATTCAAGCAAAATTTTTGGCCGTTTAGCTAAGGTTTGAACATTTTATGATTTTCCATATTATATGGCTATTTAGATAATGTGTCACTACAGGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGTTGCTTTTGACGTTATCAGCTTCGTTTTCATTTCCTTTCGGACTTCACATCAAATAACTATTGGACAGTTGAGCATACTGACAATATATTTGTGTACCAAGATATGCATGTGAAAATGCATGCAGCTTCATTCTATTTTTCACATTTATGCCAACTACAAGGCCGTATGGAGGGAAGGATCCCTCTGTCCTTTCATTTTCTGTTGGAAGAGGCGATTGTTTCTTTTGTAGCTGACGGAAGAAAGGTCCACGTGAAACCTGTTTACTACATGCATCTTTCTTAGTGTTCAACTTTAAAGCATCTGAGAGAAATTATTTGTTTGAGTTTTATAGTATTGAACTGCACATCCATCAACTACATGAATTCTCTTTGCTTTCATGTTTGATACATGTTTATTGATTTTTTTGTATTGTAAAATTCTGGGATTATTTGAAATCATTACAAATTCCTTATCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACCCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTAGGAGTAATGTTGTCCTTAACGGGCAATAATTTGAAATAGTGGGCCTTTTTGAAATGGTTGTTCTCCTCTTAGGTTGTCCTGTACATGTCGATGGATATCAAAATACCTGGTTCTTATTAGTGAAGGGATCTTCATATCTGATAAGGATTGTAATAAGTTGCTCTTCAAAGTGTACATGTCACCGTTGTAAGTTGGTTAGGGGAGAGTGATTGTAAGTAATATAATGTAAATTTGAGTCCCTTCTTTGGCAATGAGTTTGACTTAAATTGTTATATCATGCATGAAAACAGAGTCTAATTTTTTTTTTCAAGTGATGGTTTTTAAGTTTGGAAAATCTCTCCCGCTTTTTCTTTCAGAGTGAGAAAATTCTTCAACTTATCTACATGCGCATGATCTCACAGGAGAGAGTAGTATGCTACACGTGCACATTCTTATAATAACATGTTCAACATTATCCCTCAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGGTAAATTCTTGACATATTTTTTTGTTTGGAGTAGTACTGAGCTTATTGTTTATTAATAATAGTCAATCACCTATTATCTATCTTTATCCCGAAATGTTAGAAAACGTCTATTCTCTGGAAAACTTGCTAAAATAGCAAAAAATAAATACCCCAAAATTCATATTCATATATTTTTAGACAGCGCCATGTGGTGTGGTAGGGTCTGAGCACAATGGGGCTCTCATCTCACCTTATCTGGCATCTCCTTCCAGAGAACTTGTGCCTGATCTGCCGCTGAGCCGCTGAGATGCAATTCACATTATAATACTGGAAAGGAAATGATGAACCATTTGATTGATAGGAATGCCTTCCGATGGTTAGAAATGTTAACCTAGGGTCAAGGGTATATTAGTAATCAGGTCGAGGAGTTTATTGTTAGGAGTTAATCGTCAATGGGCAACTGGGTGGATAGGAAGGTAGTCTGCATAATATGATTGCATTTTGTCAGATGATTTTTTAATAGAAATTTCAATCCCAGCAGCCTTTTTGTTTTTTTACTTTTAACTTTCAATTTTATCATTATTATTTAAGCAGTGCTTGATTTCAATCTGTGGGGGTTGTATTTATCCTGAGAGATCTTTGGATCAATGGTTGTTGCCTTGCATTTGAACAAGCTTTTTCCTGTACAAATTGTTAAATGAGTTATAATTCTTGCTATTACCATGTGTTGGCCCCAGTCAATGATATAAGTTTCAATAAGAGAAATTGTATGGGGTTAGCAGTTGCTAGTTTGGATCTGTTTGTAACGATGACTTGTACTGTTTTCATAGGTGCTGCAATAGGATCTGGGGCTAGCTTTGGAGCAACTTCGGTGAGTTACATATTTCTCATATCAGGTTTTGGTTCTTCGGTTTATTCCCTTTTATGAACGTTTTTAGCGCTACTAGTCTATGACTCTGAAGTCCTTAACTTAAGGTGTAACATTCGTAGTATCAATTCGGCACTTCTGCTTATGAATGGAAGATCTGTTGGGGATTTATGGGGTCGTGTGTATTTGTAGAAAACATAAAATCTCATGCTTATGCTTGGTATATTTGCTTGGTACATGCAAACTATATGACCAATCTTATTCTATTGCAGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAG

mRNA sequence

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACCCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGGTGCTGCAATAGGATCTGGGGCTAGCTTTGGAGCAACTTCGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAG

Coding sequence (CDS)

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACCCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGGTGCTGCAATAGGATCTGGGGCTAGCTTTGGAGCAACTTCGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAG

Protein sequence

MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATSKSSKPKSRTARRY

Homology

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy Swiss-Prot
Match: Q8RWH9 (Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 8.2e-133
Identity = 304/502 (60.56%), Postives = 361/502 (71.91%), Query Frame = 0


Query: 4   SLFSTSQPQQSQQLF-QSQPQ------SQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQ 63
           S+FS SQPQQ+  +F QSQPQ      SQPQ  QQ ++LF  QPQQFQ QQQQL QQQQQ
Sbjct: 31  SIFSQSQPQQTNSIFSQSQPQQTNSIFSQPQQ-QQQTSLF--QPQQFQQQQQQLNQQQQQ 90

Query: 64  LMQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYD 123
             Q QQQL++FTNDKAPA+Y TKWADLHPDSQK+L+QIEE+ILE+R ESQRLDQCSRLYD
Sbjct: 91  --QVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYD 150

Query: 124 SSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPR 183
           SSVS++GFE DASRIVQELGGI+T+ + QK +L ELM  AK ML N E+A+RSFM + PR
Sbjct: 151 SSVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPR 210

Query: 184 FLNQSEGG--ASNSTAPPQVSGATSPIGSSGQPTS-TSIAPVFDFYSGLPSKPSPFLQQT 243
           F +  +GG   S  + P Q  G      SSGQ  + T+   V DFY G+P KP+ FL QT
Sbjct: 211 FPHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQT 270

Query: 244 VSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVE 303
           V RFEKYL ECRQW+EELEQ LALDS++ + ++  SL  SLPK+MSNVH+FFVHVAAKVE
Sbjct: 271 VVRFEKYLNECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAKVE 330

Query: 304 SIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHL---TANTQP 363
           SIHQYI+SM+ +YLADQR RG+ ++PFLEADRRETA+QEAAAKRVHPTLHL   T +TQP
Sbjct: 331 SIHQYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQP 390

Query: 364 STQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQ 423
           STQ AGL+ASS + G S   Q S   +  SSG G S  +TP+  S  SSSLF TP+++  
Sbjct: 391 STQVAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAP 450

Query: 424 TSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAI 483
           TSSLF  S     T LFGSS A  F S  + FG T  S    +  G          GA  
Sbjct: 451 TSSLFGPSPTPTQTPLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG----------GATP 510

Query: 484 GSGASFGATSKSSKPKSRTARR 493
           GSGASFG+ +KSS+PKSRT RR
Sbjct: 511 GSGASFGSMTKSSRPKSRTTRR 513

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy Swiss-Prot
Match: P70581 (Nucleoporin p58/p45 OS=Rattus norvegicus OX=10116 GN=Nup58 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 9.5e-04
Identity = 79/263 (30.04%), Postives = 120/263 (45.63%), Query Frame = 0


Query: 226 PSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFF 285
           P+ + +  V +FE  L + RQ IEELE  LA  +N S           L   M  +++ F
Sbjct: 328 PADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITP-----QDLSMAMQKIYQTF 387

Query: 286 VHVAAKVESIHQYIDSMKAAYLADQRC-RGDGNNPFLEADRRETAR-QEAAAKRVHPTLH 345
           V +AA+++SIH+ +  +K  YL+ ++   GD  + F EA R E  + Q A      PT  
Sbjct: 388 VALAAQLQSIHENVKVLKEQYLSYRKMFLGDAGDVF-EARRTEAKKWQNAPRVTTGPT-- 447

Query: 346 LTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSL---FSTPSAPSTTSSS 405
              +T P+  A  +        A+T+ Q    AT      G+S    F +       SS 
Sbjct: 448 -PFSTMPNAAAVAM--------AATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSG 507

Query: 406 LFMTPTASVQTSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLF 465
           L  +      TSS F   G TG +T FG      F +   P GS +  FG S+++G + F
Sbjct: 508 LGSSNLGGFGTSSGF-GCGTTGAST-FG------FGTTDKPSGSLSAGFGSSSTSGFN-F 561

Query: 466 STPFASGAAIGSGASFGATSKSS 484
           S P   G    +G +FG ++ +S
Sbjct: 568 SNP---GITASAGLTFGVSNPAS 561

[Close]

BLAST of Csor.00g057590.m01 vs. NCBI nr
Match: KAG6604202.1 (Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 894 bits (2311), Expect = 0.0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 493

[Close]

BLAST of Csor.00g057590.m01 vs. NCBI nr
Match: XP_022949626.1 (nuclear pore complex protein NUP58 isoform X1 [Cucurbita moschata])

HSP 1 Score: 873 bits (2256), Expect = 0.0
Identity = 484/493 (98.17%), Postives = 484/493 (98.17%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL   
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL--- 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
               FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  ----FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKI PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAA GSGASFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAATGSGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 486

[Close]

BLAST of Csor.00g057590.m01 vs. NCBI nr
Match: XP_022949627.1 (nuclear pore complex protein NUP58 isoform X2 [Cucurbita moschata])

HSP 1 Score: 863 bits (2230), Expect = 3.82e-314
Identity = 481/493 (97.57%), Postives = 481/493 (97.57%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL   
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL--- 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
               FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  ----FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKI PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASG    SGASFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASG----SGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 482

[Close]

BLAST of Csor.00g057590.m01 vs. NCBI nr
Match: KAG7034363.1 (Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 846 bits (2185), Expect = 3.21e-307
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKI PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS 466
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS 466

[Close]

BLAST of Csor.00g057590.m01 vs. NCBI nr
Match: XP_023543262.1 (nuclear pore complex protein NUP58-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 843 bits (2179), Expect = 2.10e-306
Identity = 469/493 (95.13%), Postives = 470/493 (95.33%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFST QPQQSQQLFQSQPQSQPQLFQQSSALFSQQP             QQQLMQQ
Sbjct: 1   MAFSLFSTPQPQQSQQLFQSQPQSQPQLFQQSSALFSQQP-------------QQQLMQQ 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           QQQLFIFTNDKAPASYGTKWADLHPDSQK L+QIEERILE RDESQRLDQCSRLYDSSVS
Sbjct: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKTLLQIEERILECRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFM I PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMMIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVF FYSGLP KPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFYFYSGLPRKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALD NRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDCNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
            GPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAA GSGASFGATS
Sbjct: 421 RGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAATGSGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 480

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL
Match: A0A6J1GCI2 (nuclear pore complex protein NUP58 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452960 PE=4 SV=1)

HSP 1 Score: 873 bits (2256), Expect = 0.0
Identity = 484/493 (98.17%), Postives = 484/493 (98.17%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL   
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL--- 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
               FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  ----FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKI PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAA GSGASFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAATGSGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 486

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL
Match: A0A6J1GCN0 (nuclear pore complex protein NUP58 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452960 PE=4 SV=1)

HSP 1 Score: 863 bits (2230), Expect = 1.85e-314
Identity = 481/493 (97.57%), Postives = 481/493 (97.57%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL   
Sbjct: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQL--- 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
               FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  ----FIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKI PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASG    SGASFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASG----SGASFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRTARRY
Sbjct: 481 KSSKPKSRTARRY 482

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL
Match: A0A6J1ISB5 (nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111478852 PE=4 SV=1)

HSP 1 Score: 842 bits (2176), Expect = 4.24e-306
Identity = 470/493 (95.33%), Postives = 472/493 (95.74%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQ 60
           MAFSLFST QPQQSQQLFQSQPQSQPQLFQQSSALFSQ+PQQFQLQQQQLMQQQQQ   Q
Sbjct: 1   MAFSLFSTPQPQQSQQLFQSQPQSQPQLFQQSSALFSQKPQQFQLQQQQLMQQQQQ---Q 60

Query: 61  QQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           QQQLFIFT DKAPASYGTKWADLHPDSQKIL+QIEERILEYRDESQRLDQCSRLYD SVS
Sbjct: 61  QQQLFIFTYDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDPSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFM I PRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMMIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           S GGASNSTA PQVSGATSPIGSSGQPTSTSIAPVFDFY GLP KPSPFLQQTVSRFEKY
Sbjct: 181 SAGGASNSTASPQVSGATSPIGSSGQPTSTSIAPVFDFYRGLPRKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKA YLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPT HL ANTQPSTQAAGLLAS
Sbjct: 301 SMKATYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTSHLPANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420
           SGSHGASTVQQLSTVATPAS GGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA
Sbjct: 361 SGSHGASTVQQLSTVATPASFGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGA 420

Query: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAIGSGASFGATS 480
           TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFST FASGA  GSG SFGATS
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTSFASGAVTGSGVSFGATS 480

Query: 481 KSSKPKSRTARRY 493
           KSSKPKSRT RRY
Sbjct: 481 KSSKPKSRTVRRY 490

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL
Match: A0A6J1HHG2 (nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC111463519 PE=4 SV=1)

HSP 1 Score: 778 bits (2009), Expect = 2.06e-280
Identity = 439/506 (86.76%), Postives = 455/506 (89.92%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQ-------- 60
           MAFSLFST QPQQ QQLFQSQPQSQPQLFQQSS+LFSQQPQQFQLQQQQ  Q        
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQPQQFQLQQQQQQQLQQQQQQQ 60

Query: 61  --QQQQLMQQQQQ---LFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQR 120
             QQQQLMQQQQQ   LFIFTNDKAPASYGTKWADLHPDSQKIL+QIEERILEYRDESQR
Sbjct: 61  QQQQQQLMQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQR 120

Query: 121 LDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAI 180
           LDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMT+ KGMLWNTEVAI
Sbjct: 121 LDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVAI 180

Query: 181 RSFMKIPPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPS 240
           RSFM I PRFL+QS GGA+N   P QV G TSP+GSS QPTSTSI PVFDFYSGLP KPS
Sbjct: 181 RSFMMICPRFLHQSTGGATNPAVPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKPS 240

Query: 241 PFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVH 300
           PFLQQTVSRFEKYLGECRQWIEELEQ L  +SNRSASNS +SLFHSLPKIMSNVHEFF+H
Sbjct: 241 PFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFIH 300

Query: 301 VAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTAN 360
           VAAKVESIHQYIDSMKAAYLADQR RGD NNPFLEADRRETARQEA AKR HPTLHL AN
Sbjct: 301 VAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPAN 360

Query: 361 TQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTA 420
           +QPSTQA G+LASSG+HGAST  Q ST+ATPASS GGLSLFSTPSAP+T SSSLFMTPTA
Sbjct: 361 SQPSTQATGVLASSGNHGASTAPQSSTLATPASSAGGLSLFSTPSAPATASSSLFMTPTA 420

Query: 421 SVQTSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASG 480
           SVQTSSLFSSSGA  PT+LFGSSSAPLF+SA TPFGSTA SFGQSASAG SLFSTPFASG
Sbjct: 421 SVQTSSLFSSSGAAAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASAGGSLFSTPFASG 480

Query: 481 AAIGSGASFGATSKSSKPKSRTARRY 493
           AA GSGASFGATSKSSKPKSRTARRY
Sbjct: 481 AATGSGASFGATSKSSKPKSRTARRY 506

[Close]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL
Match: A0A6J1KTN6 (nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497125 PE=4 SV=1)

HSP 1 Score: 776 bits (2005), Expect = 9.04e-280
Identity = 438/508 (86.22%), Postives = 453/508 (89.17%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLM--------- 60
           MAFSLFST QPQQ QQLFQSQPQSQPQLFQQSS+LFSQQPQ FQLQQQQ           
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQPQPFQLQQQQQQLQQQQQHQQ 60

Query: 61  ---QQQQQLMQQQQQ---LFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDES 120
              QQQQQLMQQQQQ   LFIFTNDKAPASYGTKWADLHPDSQKIL+QIEERILEYRDES
Sbjct: 61  QQQQQQQQLMQQQQQPQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES 120

Query: 121 QRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEV 180
           QRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELM + KGMLWNTEV
Sbjct: 121 QRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMISVKGMLWNTEV 180

Query: 181 AIRSFMKIPPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSK 240
           AIRSFM I PRF++QS GGA+N  AP QV G TSP+GSSGQPTSTSI PVFDFYSGLP K
Sbjct: 181 AIRSFMMIRPRFVHQSTGGATNPAAPTQVPGVTSPLGSSGQPTSTSIVPVFDFYSGLPKK 240

Query: 241 PSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFF 300
           PSPFLQQTVSRFEKYLGECRQWIEELEQ L  +SNRSASNS +SLFHSLPKIMSNVHEFF
Sbjct: 241 PSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFF 300

Query: 301 VHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLT 360
           +HVAAKVESIHQYIDSMKAAYLADQR RGD NNPFLEADRRETARQE  AKR HPTLHL 
Sbjct: 301 IHVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQETVAKRAHPTLHLP 360

Query: 361 ANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTP 420
           AN+QPSTQA GLLASSG+HGAST  Q STVATPASS GGLSLFSTPS P+T SSSLFMTP
Sbjct: 361 ANSQPSTQATGLLASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSGPATASSSLFMTP 420

Query: 421 TASVQTSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFA 480
           TASVQTSSLFSSSGAT PT+LFGSSSAPLF+SA TPFGSTA SFGQSAS G SLFSTPFA
Sbjct: 421 TASVQTSSLFSSSGATAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASTGGSLFSTPFA 480

Query: 481 SGAAIGSGASFGATSKSSKPKSRTARRY 493
           SGAA GSGASFGATSKSSKPKSRTARRY
Sbjct: 481 SGAATGSGASFGATSKSSKPKSRTARRY 508

[Close]

BLAST of Csor.00g057590.m01 vs. TAIR 10
Match: AT4G37130.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 475.3 bits (1222), Expect = 5.9e-134
Identity = 304/502 (60.56%), Postives = 361/502 (71.91%), Query Frame = 0


Query: 4   SLFSTSQPQQSQQLF-QSQPQ------SQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQ 63
           S+FS SQPQQ+  +F QSQPQ      SQPQ  QQ ++LF  QPQQFQ QQQQL QQQQQ
Sbjct: 31  SIFSQSQPQQTNSIFSQSQPQQTNSIFSQPQQ-QQQTSLF--QPQQFQQQQQQLNQQQQQ 90

Query: 64  LMQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYD 123
             Q QQQL++FTNDKAPA+Y TKWADLHPDSQK+L+QIEE+ILE+R ESQRLDQCSRLYD
Sbjct: 91  --QVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYD 150

Query: 124 SSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIPPR 183
           SSVS++GFE DASRIVQELGGI+T+ + QK +L ELM  AK ML N E+A+RSFM + PR
Sbjct: 151 SSVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPR 210

Query: 184 FLNQSEGG--ASNSTAPPQVSGATSPIGSSGQPTS-TSIAPVFDFYSGLPSKPSPFLQQT 243
           F +  +GG   S  + P Q  G      SSGQ  + T+   V DFY G+P KP+ FL QT
Sbjct: 211 FPHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQT 270

Query: 244 VSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVE 303
           V RFEKYL ECRQW+EELEQ LALDS++ + ++  SL  SLPK+MSNVH+FFVHVAAKVE
Sbjct: 271 VVRFEKYLNECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAKVE 330

Query: 304 SIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHL---TANTQP 363
           SIHQYI+SM+ +YLADQR RG+ ++PFLEADRRETA+QEAAAKRVHPTLHL   T +TQP
Sbjct: 331 SIHQYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQP 390

Query: 364 STQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQ 423
           STQ AGL+ASS + G S   Q S   +  SSG G S  +TP+  S  SSSLF TP+++  
Sbjct: 391 STQVAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAP 450

Query: 424 TSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAAI 483
           TSSLF  S     T LFGSS A  F S  + FG T  S    +  G          GA  
Sbjct: 451 TSSLFGPSPTPTQTPLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG----------GATP 510

Query: 484 GSGASFGATSKSSKPKSRTARR 493
           GSGASFG+ +KSS+PKSRT RR
Sbjct: 511 GSGASFGSMTKSSRPKSRTTRR 513

The following BLAST results are available for this feature:

BLAST of Csor.00g057590.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWH9	8.2e-133	60.56	Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1...	[more]
P70581	9.5e-04	30.04	Nucleoporin p58/p45 OS=Rattus norvegicus OX=10116 GN=Nup58 PE=1 SV=1	[more]

BLAST of Csor.00g057590.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604202.1	0.0	100.00	Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022949626.1	0.0	98.17	nuclear pore complex protein NUP58 isoform X1 [Cucurbita moschata]	[more]
XP_022949627.1	3.82e-314	97.57	nuclear pore complex protein NUP58 isoform X2 [Cucurbita moschata]	[more]
KAG7034363.1	3.21e-307	99.79	Nuclear pore complex protein NUP58, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023543262.1	2.10e-306	95.13	nuclear pore complex protein NUP58-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g057590.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCI2	0.0	98.17	nuclear pore complex protein NUP58 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1GCN0	1.85e-314	97.57	nuclear pore complex protein NUP58 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1ISB5	4.24e-306	95.33	nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1HHG2	2.06e-280	86.76	nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KTN6	9.04e-280	86.22	nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497...	[more]

BLAST of Csor.00g057590.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37130.1	5.9e-134	60.56	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	GENE3D	6.10.140.1350		coord: 224..315 e-value: 3.7E-25 score: 89.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..493
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR13437:SF2	NUCLEOPORIN P58/P45	coord: 8..488
IPR024882	Nucleoporin p58/p45	PANTHER	PTHR13437	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	coord: 8..488

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g057590	Csor.00g057590	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.CDS06	Csor.00g057590.m01.CDS06	CDS
Csor.00g057590.m01.CDS05	Csor.00g057590.m01.CDS05	CDS
Csor.00g057590.m01.CDS04	Csor.00g057590.m01.CDS04	CDS
Csor.00g057590.m01.CDS03	Csor.00g057590.m01.CDS03	CDS
Csor.00g057590.m01.CDS02	Csor.00g057590.m01.CDS02	CDS
Csor.00g057590.m01.CDS01	Csor.00g057590.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.terminal01	Csor.00g057590.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.stop_codon01	Csor.00g057590.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.intron05	Csor.00g057590.m01.intron05	intron
Csor.00g057590.m01.intron04	Csor.00g057590.m01.intron04	intron
Csor.00g057590.m01.intron03	Csor.00g057590.m01.intron03	intron
Csor.00g057590.m01.intron02	Csor.00g057590.m01.intron02	intron
Csor.00g057590.m01.intron01	Csor.00g057590.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.internal04	Csor.00g057590.m01.internal04	internal
Csor.00g057590.m01.internal03	Csor.00g057590.m01.internal03	internal
Csor.00g057590.m01.internal02	Csor.00g057590.m01.internal02	internal
Csor.00g057590.m01.internal01	Csor.00g057590.m01.internal01	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.initial01	Csor.00g057590.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01.start_codon01	Csor.00g057590.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g057590.m01	Csor.00g057590.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0017056	structural constituent of nuclear pore