Csor.00g044960.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g044960.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	LOB domain-containing protein
Location	Csor_Chr18: 1023942 .. 1024424 (-)
Sequence length	483
RNA-Seq Expression	Csor.00g044960.m01
Synteny	Csor.00g044960.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGCGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGCCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

mRNA sequence

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGCGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGCCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Coding sequence (CDS)

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGCGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGCCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Protein sequence

MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI

Homology

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-45
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEA AR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 167.9 bits (424), Expect = 9.1e-41
Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 14  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAACKFLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 74  SLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFS 120
           SLAYEA AR+KDPVYGCVGAIS LQ+QV RLQ+EL+   A L  ++
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-37
Identity = 74/102 (72.55%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 14  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAACKFLRRKC   CV+APYFPP+ PQKFANVHKVFGASNV KLLNE+ P QR+DAV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARL 116
           SLAYEA  R++DPVYGCVG IS LQ Q+++LQ +L  AK+ L
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-35
Identity = 75/124 (60.48%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 14  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAACKFLRRKC   CV+APYFPP+ PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFSSQPQI 133
           SL YEA AR++DPVYGCVG IS LQ +++++  +L+ AK  L  +       P   QP  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPI-LQPHF 125

Query: 134 ISPP 138
           +S P
Sbjct: 126 MSLP 128

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-35
Identity = 70/102 (68.63%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 14  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAACKFLRRKC   CV+APYFPP++PQKF +VH+VFGASNV KLLNE+ P QR+DAV 
Sbjct: 32  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91

Query: 74  SLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARL 116
           SLAYEA  R++DPVYGCVG IS LQ  +++LQ++L  AK  L
Sbjct: 92  SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYEL 133

[Close]

BLAST of Csor.00g044960.m01 vs. NCBI nr
Match: KAG6573077.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331 bits (848), Expect = 1.73e-114
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. NCBI nr
Match: XP_023542328.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329 bits (843), Expect = 1.00e-113
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. NCBI nr
Match: XP_022954529.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG7012263.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (840), Expect = 2.87e-113
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAAC+FLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. NCBI nr
Match: XP_022994675.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima])

HSP 1 Score: 320 bits (820), Expect = 3.22e-110
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARIKDPVYGCVGAIS LQKQVQRLQKELDAAKARL LFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISFLQKQVQRLQKELDAAKARLRLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. NCBI nr
Match: XP_022924080.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG6584203.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019799.1 Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270 bits (691), Expect = 1.45e-90
Identity = 134/160 (83.75%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS + T T+HYYSPCAACKFLRRKCIAGC++APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 3   MGSLA-TGTNHYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLL 62

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAY+A ARI+DPVYGCV AIS LQKQVQRLQ ELDAAKARL L+S 
Sbjct: 63  NEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSC 122

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFS PFS QPQIISPP++WN N  DIV ANSS+YFNGGI
Sbjct: 123 TDFSTPFSPQPQIISPPLLWNHN--DIVSANSSVYFNGGI 159

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL
Match: A0A6J1GT86 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111456772 PE=3 SV=1)

HSP 1 Score: 328 bits (840), Expect = 1.39e-113
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAAC+FLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL
Match: A0A6J1K206 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111490317 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 1.56e-110
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARIKDPVYGCVGAIS LQKQVQRLQKELDAAKARL LFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISFLQKQVQRLQKELDAAKARLRLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL
Match: A0A6J1EDS7 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111431618 PE=3 SV=1)

HSP 1 Score: 270 bits (691), Expect = 7.04e-91
Identity = 134/160 (83.75%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS + T T+HYYSPCAACKFLRRKCIAGC++APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 3   MGSLA-TGTNHYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLL 62

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAY+A ARI+DPVYGCV AIS LQKQVQRLQ ELDAAKARL L+S 
Sbjct: 63  NEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSC 122

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFS PFS QPQIISPP++WN N  DIV ANSS+YFNGGI
Sbjct: 123 TDFSTPFSPQPQIISPPLLWNHN--DIVSANSSVYFNGGI 159

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL
Match: A0A6J1KEE2 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111495065 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 3.34e-89
Identity = 132/160 (82.50%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS + T T+HYYSPCAACKFLRRKCI+GC++APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 3   MGSLA-TGTNHYYSPCAACKFLRRKCISGCIFAPYFPPEEPQKFANVHKVFGASNVAKLL 62

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAY+A ARI+DPVYGCV AIS LQKQVQRLQ ELDAAKARL L+S 
Sbjct: 63  NEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSC 122

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160
           TDFS PFS Q QIISPP++WN N  DIV ANSS+YFNGGI
Sbjct: 123 TDFSTPFSPQSQIISPPLLWNHN--DIVSANSSVYFNGGI 159

[Close]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL
Match: A0A0A0LTL0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=3 SV=1)

HSP 1 Score: 251 bits (641), Expect = 3.71e-83
Identity = 131/168 (77.98%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS+  T ++HYYSPCAACKFLRRKC+AGCV+APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 1   MGST--TTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEA ARI+DPVYGCVGAIS LQKQVQRLQKELDAAKARL L+S 
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSC 120

Query: 121 TDFSAPFSSQPQIISPP---MIWNSN-NYDIVYANS----SMYFNGGI 160
           TDFS PF    QII+ P   +IWN+N NY+I   N     SMYFNGGI
Sbjct: 121 TDFSTPFLPHSQIINTPHHPVIWNNNSNYNINNHNDINNPSMYFNGGI 166

[Close]

BLAST of Csor.00g044960.m01 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-47
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEA AR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Csor.00g044960.m01 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-47
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEA AR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Csor.00g044960.m01 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-47
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEA AR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Csor.00g044960.m01 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-47
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEA AR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Csor.00g044960.m01 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 167.9 bits (424), Expect = 6.5e-42
Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 14  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAACKFLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 74  SLAYEAAARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFS 120
           SLAYEA AR+KDPVYGCVGAIS LQ+QV RLQ+EL+   A L  ++
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

The following BLAST results are available for this feature:

BLAST of Csor.00g044960.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML4	1.2e-45	71.20	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q8L8Q3	9.1e-41	72.64	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
O04479	2.7e-37	72.55	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q9FKZ3	1.2e-35	60.48	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
Q32SG3	2.6e-35	68.63	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of Csor.00g044960.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573077.1	1.73e-114	100.00	Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023542328.1	1.00e-113	99.38	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954529.1	2.87e-113	98.75	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG7012263.1 Protein...	[more]
XP_022994675.1	3.22e-110	98.13	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima]	[more]
XP_022924080.1	1.45e-90	83.75	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata] >KAG6584203.1 Protein...	[more]

BLAST of Csor.00g044960.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT86	1.39e-113	98.75	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1K206	1.56e-110	98.13	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11149031...	[more]
A0A6J1EDS7	7.04e-91	83.75	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A6J1KEE2	3.34e-89	82.50	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11149506...	[more]
A0A0A0LTL0	3.71e-83	77.98	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=3 SV...	[more]

BLAST of Csor.00g044960.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63090.2	8.7e-47	71.20	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	8.7e-47	71.20	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	8.7e-47	71.20	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	8.7e-47	71.20	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	6.5e-42	72.64	LOB domain-containing protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 9..137
None	No IPR available	PANTHER	PTHR31301:SF91	PROTEIN LATERAL ORGAN BOUNDARIES	coord: 9..137
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 7.6E-41 score: 138.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 26.501989

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g044960	Csor.00g044960	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g044960.m01.CDS01	Csor.00g044960.m01.CDS01	CDS

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g044960.m01.single01	Csor.00g044960.m01.single01	single

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g044960.m01.stop_codon01	Csor.00g044960.m01.stop_codon01	stop_codon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g044960.m01.start_codon01	Csor.00g044960.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g044960.m01	Csor.00g044960.m01-protein	polypeptide