Csor.00g024560.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g024560.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	UPF0725 protein At4g29550-like
Location	Csor_Chr04: 4498052 .. 4498863 (+)
Sequence length	510
RNA-Seq Expression	Csor.00g024560.m01
Synteny	Csor.00g024560.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGTTTATTTTCTTTTAATTTTTCACTGGTCAAACTCGATATTTTTTTCTTTTTTTTAATTGAAGGATGTATGCAGGGTTTTGATGTACCAGATTTTGGCAAAGTCAAAGTCTTTTCATGTAGTCTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCGAACATTACAACAAGGAAAATGTAATGTTCTAACTTGCTAGCTATGCCTCTTTTTTTTTTTGTTGTTTTATCATGTGAAAAAGAATTTGTCCACTCATCTCTGTAAATGTTTCTTTTATCTTCCTATAGATAGGGAACTAATTTTGAAGTCGTAGAGATTGTGAAATGTTTCTTTTATCTTTTATTTATAGGGAACTAATTTTGAAGTTGTAGAGATTGTGAAATGTTTCTTTTATCTTTTATCTATAGGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGCTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGACAGAATTTTCCCCAATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATAAAAGATATTATAGACGTCGAACTTTGCAAGCCAAAGTTCTTTAATTTGCAAAGTTCTTTAATTAGCGATCAATAA

mRNA sequence

ATGGCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGGTTTTGATGTACCAGATTTTGGCAAAGTCAAAGTCTTTTCATGTAGTCTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCGAACATTACAACAAGGAAAATGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGCTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGACAGAATTTTCCCCAATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATAAAAGATATTATAGACGTCGAACTTTGCAAGCCAAAGTTCTTTAATTTGCAAAGTTCTTTAATTAGCGATCAATAA

Coding sequence (CDS)

ATGGCTTCTTCAAACCACCTCTCGGAGGAAGAGGAGGAAGAGATAGATTCGGACGATGAATTTTATCAAGACGGTTACCATACTATCACTAAGAAAGAAGAGAGGGAGTATTTTCGTGCAGTTGAAGAATCGGAGGGTTTTGATGTACCAGATTTTGGCAAAGTCAAAGTCTTTTCATGTAGTCTCATCATTCCAATAGATATGCATGAGAACTCGTGGATGCTTAAAGAGGTTCGAATCTCAGCAAATAAAGCTATCGAACATTACAACAAGGAAAATGGAACTAATTTTGAAGTTGTAGAGATTGTGAAGGCGAATCATTCTGGATGCTGTGGCTCGATGTATTACATCACATTTAATGTGAAGCCGATTGGAACCTCGACAGAATTTTCCCCAATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATAAAAGATATTATAGACGTCGAACTTTGCAAGCCAAAGTTCTTTAATTTGCAAAGTTCTTTAATTAGCGATCAATAA

Protein sequence

MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSCSLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFNVKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFNLQSSLISDQ

Homology

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BLAST of Csor.00g024560.m01 vs. ExPASy Swiss-Prot
Match: Q9SRX1 (UPF0725 protein At1g02770 OS=Arabidopsis thaliana OX=3702 GN=At1g02770 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.5e-05
Identity = 39/143 (27.27%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 33  EEREYFRAVEESEGFDVPDF----GKVKVFSCSLIIPIDMHENSWMLKEVRISANKAIEH 92
           E  +Y+  V+ES+GFDV       G   +      +P   H +  +   V++ A+  +  
Sbjct: 20  EVEDYWARVDESDGFDVEGIQAPPGGTPLIHYDCHLPNSRHPDPVL---VKLYASAGLHR 79

Query: 93  YNKENGTNFEVVEIVKANHSGCCGSMYYITFNVK-PIGTSTEFSPITFQAKV-YYAIPIK 152
           YN   GTNF++V+++K N      S +YIT   + P+  S +    TFQ +V  + +   
Sbjct: 80  YNMLEGTNFKLVDVMKFNKLMMHLSPFYITLLAQDPVSRSQQ----TFQVQVDEHCLSTM 139

Query: 153 DIIDVELCKPKFFNLQSSLISDQ 170
           D + V + +PK  +   S+++ Q
Sbjct: 140 D-LTVLIARPKAVSTNESVLAPQ 154

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BLAST of Csor.00g024560.m01 vs. ExPASy Swiss-Prot
Match: Q9LH42 (UPF0725 protein At3g19520 OS=Arabidopsis thaliana OX=3702 GN=At3g19520 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-04
Identity = 29/87 (33.33%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 34  EREYFRAVEESEGFDVPDFGKVKVFSCSLIIPIDMHENSWMLKEV--RISANKAIEHYNK 93
           + +Y+R + ES+GFD+ D    +     L   +D     + L+    +I A   +  YN 
Sbjct: 16  QMKYWRQIAESDGFDIDDVPVPRGTRAGL-WSVDCKHPRFRLRACLPKIYAMVGLHRYNL 75

Query: 94  ENGTNFEVVEIVKANHSGCCGSMYYIT 119
             GTNFE +E++K N S  C   YYIT
Sbjct: 76  LRGTNFEHLELLKYNESMNCVCSYYIT 101

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BLAST of Csor.00g024560.m01 vs. NCBI nr
Match: KAG6600691.1 (hypothetical protein SDJN03_05924, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343 bits (880), Expect = 4.51e-119
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC
Sbjct: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFNLQSSLISDQ 169
           VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFNLQSSLISDQ
Sbjct: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFNLQSSLISDQ 169

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BLAST of Csor.00g024560.m01 vs. NCBI nr
Match: XP_022942205.1 (uncharacterized protein LOC111447329 [Cucurbita moschata])

HSP 1 Score: 303 bits (777), Expect = 1.64e-102
Identity = 149/160 (93.12%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           M SSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDF KV  FSC
Sbjct: 69  MPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKV--FSC 128

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           S IIPIDMHENSWMLKEVRISANKAI+HYNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 129 SFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 188

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EF PITFQAKVYY IPIKDIIDV+LC+PKFFN
Sbjct: 189 VKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 226

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BLAST of Csor.00g024560.m01 vs. NCBI nr
Match: XP_023521681.1 (UPF0725 protein At4g29550-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300 bits (769), Expect = 2.60e-102
Identity = 150/160 (93.75%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDF KV  FS 
Sbjct: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKV--FSY 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           SLI PIDMHENSWML+EVRISANKAI+HYNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 61  SLIAPIDMHENSWMLEEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTSTEF  ITFQAKVYYAIPIKDIIDVELC+PKFFN
Sbjct: 121 VKPIGTSTEFPLITFQAKVYYAIPIKDIIDVELCRPKFFN 158

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BLAST of Csor.00g024560.m01 vs. NCBI nr
Match: XP_022942626.1 (UPF0725 protein At4g29550-like [Cucurbita moschata])

HSP 1 Score: 300 bits (767), Expect = 7.15e-102
Identity = 149/160 (93.12%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           M SSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDF KV  FS 
Sbjct: 10  MPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKV--FSY 69

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           SLI PIDMHE+SWMLKEVRISANKAI++YNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 70  SLIAPIDMHEDSWMLKEVRISANKAIKYYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 129

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EFSPITFQAKVYYAIPIKDIIDVELC+PKFFN
Sbjct: 130 VKPIGTSAEFSPITFQAKVYYAIPIKDIIDVELCRPKFFN 167

[Close]

BLAST of Csor.00g024560.m01 vs. NCBI nr
Match: KAG6600694.1 (hypothetical protein SDJN03_05927, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255 bits (651), Expect = 2.51e-84
Identity = 128/160 (80.00%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASS+H+ EEE+EEIDSDDEF+QDGYHTITKKEE EY+ AVEES+GFDVPDFG V  FS 
Sbjct: 1   MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYYCAVEESQGFDVPDFGNVYAFS- 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
            LI P+ +HE   MLKEV+ISAN+AI+HYN ENGTNFEVV+IVKANHSGCCGSMY ITFN
Sbjct: 61  -LITPMKLHEVPGMLKEVQISANEAIKHYNNENGTNFEVVDIVKANHSGCCGSMYDITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EF PITFQAKVYYAIPIKDIIDVELC+PK  N
Sbjct: 121 VKPIGTSVEFPPITFQAKVYYAIPIKDIIDVELCRPKPSN 158

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BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL
Match: A0A6J1FVU0 (uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC111447329 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 7.96e-103
Identity = 149/160 (93.12%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           M SSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDF KV  FSC
Sbjct: 69  MPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKV--FSC 128

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           S IIPIDMHENSWMLKEVRISANKAI+HYNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 129 SFIIPIDMHENSWMLKEVRISANKAIKHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 188

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EF PITFQAKVYY IPIKDIIDV+LC+PKFFN
Sbjct: 189 VKPIGTSAEFPPITFQAKVYYVIPIKDIIDVKLCRPKFFN 226

[Close]

BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL
Match: A0A6J1FPD6 (UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 3.46e-102
Identity = 149/160 (93.12%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           M SSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDF KV  FS 
Sbjct: 10  MPSSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFDKV--FSY 69

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
           SLI PIDMHE+SWMLKEVRISANKAI++YNKENGTNFEVVEIVKANHSGCCGSMYYITFN
Sbjct: 70  SLIAPIDMHEDSWMLKEVRISANKAIKYYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 129

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EFSPITFQAKVYYAIPIKDIIDVELC+PKFFN
Sbjct: 130 VKPIGTSAEFSPITFQAKVYYAIPIKDIIDVELCRPKFFN 167

[Close]

BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL
Match: A0A6J1FN74 (uncharacterized protein LOC111447330 OS=Cucurbita moschata OX=3662 GN=LOC111447330 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 7.52e-84
Identity = 126/157 (80.25%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASS+H+ EEE+EEIDSDDEF+QDGYHTITKKEE EY+ AVEES+GFDVPDFG V  FS 
Sbjct: 1   MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYYCAVEESQGFDVPDFGNVYAFS- 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
            LI P+ +HE   MLKEV+ISAN+AI+HYN ENGTNFEVV+IVKANHSGCCGSMYYITFN
Sbjct: 61  -LITPMKLHEVPGMLKEVQISANEAIKHYNNENGTNFEVVDIVKANHSGCCGSMYYITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPK 157
           VKPIGT  EF  ITFQAKVYYAIPIKDIIDVELC+PK
Sbjct: 121 VKPIGTPLEFPSITFQAKVYYAIPIKDIIDVELCRPK 155

[Close]

BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL
Match: A0A6J1IL21 (uncharacterized protein LOC111475178 OS=Cucurbita maxima OX=3661 GN=LOC111475178 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 1.84e-79
Identity = 121/160 (75.62%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASS+H+ EEE+EEIDSDDEF+QDGYHTITKKEE EYF AV ES+GFDVP FG V  F  
Sbjct: 1   MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYFCAVNESQGFDVPYFGAVYAFG- 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
            LI P+ +H    + KEV+ISAN+AI+HYN +NGTNFEVV+IVKANH+GCCGSMYYITFN
Sbjct: 61  -LITPMKLHGFPGLFKEVQISANEAIKHYNNKNGTNFEVVDIVKANHAGCCGSMYYITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EFS ITFQAKVYYAIPIKDII+VELC+PK  N
Sbjct: 121 VKPIGTSAEFSSITFQAKVYYAIPIKDIIEVELCRPKPSN 158

[Close]

BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL
Match: A0A6J1IJT3 (uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 5.26e-79
Identity = 121/160 (75.62%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 1   MASSNHLSEEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSC 60
           MASS+H+ EEE+EEIDSDDEF+QDGYHTITKKEE EYF AV ES+GFDVP FG V  F  
Sbjct: 1   MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYFCAVNESQGFDVPYFGAVYAFG- 60

Query: 61  SLIIPIDMHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN 120
            LI P+ +H    + KEV+ISAN+AI+HYN ENGTNFEVV+IVKANH GCCGSMYYITFN
Sbjct: 61  -LITPMKLHGFPELFKEVQISANEAIKHYNSENGTNFEVVDIVKANHEGCCGSMYYITFN 120

Query: 121 VKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPKFFN 160
           VKPIGTS EF  ITFQAKVYYAIPIKDII+VELC+PK  N
Sbjct: 121 VKPIGTSAEFPSITFQAKVYYAIPIKDIIEVELCRPKPSN 158

[Close]

BLAST of Csor.00g024560.m01 vs. TAIR 10
Match: AT2G37435.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.2e-11
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 0


Query: 9   EEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVK-VFSCSLIIPID 68
           E+EE +I +++E+Y      +  KE       VE+S+GFD+ DF K + VF+     P+D
Sbjct: 37  EDEEPKISAEEEYY------LMVKE-------VEDSKGFDI-DFAKFRCVFNYR---PVD 96

Query: 69  MHENSWMLKEVRIS------ANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFNV 128
           + +N   L+             K++EH+N+ + T +E V  +KANH    G MY+ITF  
Sbjct: 97  LDDNELALEPETTREFMDRLCRKSLEHFNEIHSTKYEFVRFIKANHHVSAGMMYFITFEG 156

Query: 129 KPIGTSTEFSPITFQAKVYYAIPIKDIIDVEL 154
           K +  S +     FQAK+ Y     +II  EL
Sbjct: 157 KLL--SNDDDSKQFQAKLCYCGGTPEIISCEL 169

[Close]

BLAST of Csor.00g024560.m01 vs. TAIR 10
Match: AT1G63205.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-08
Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 18  DDEFYQDGYHTITKKEEREYF---------RAVEESEGFDVPDFGKVK-VFSCSLIIPID 77
           D E  +  Y T T+K+E +Y            + +SEGFD+ DF   + +F+  L+ P D
Sbjct: 23  DPECLKHHYITRTEKDEPQYTVDEEIAMMNEQITKSEGFDI-DFSLFRCLFNYHLVDPDD 82

Query: 78  M--------HENSWMLKEVRISANKAIEHYNKENGTN-FEVVEIVKANHSGCCGSMYYIT 137
                      N   +K     + ++++ YN E GTN +E  E+VKAN  G CG M+ IT
Sbjct: 83  FDFLDDESEETNGDFMKRF---SQESLKRYNDECGTNKYEFHEVVKANFHGSCGYMFLIT 142

Query: 138 FNVKPIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPK 158
           F V       E    TFQA++ Y        +   C+PK
Sbjct: 143 FQVFDPSDDQE---KTFQARIRYTTHYP--TEFVFCRPK 172

[Close]

BLAST of Csor.00g024560.m01 vs. TAIR 10
Match: AT1G63190.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 45/155 (29.03%), Postives = 71/155 (45.81%), Query Frame = 0


Query: 18  DDEFYQDGYHTITKKEEREYFRAVEE----------SEGFDVPDFGKVKVFSCSLIIPID 77
           D  + +  Y   TK+E+   +   +E          S+GFD+ DF   +      +  +D
Sbjct: 22  DPGYERPAYRDWTKEEDEPKYSPEKELALLDKQILASDGFDI-DFTHFRCVFNYHLAYLD 81

Query: 78  MHENSWMLKEVR----ISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFN-VK 137
            HE     +  R      + KA++ YN+E+ T FE V++VKAN   CC  M+ ITF  V 
Sbjct: 82  SHEFVDEPETTRDLLERLSRKALDDYNQESRTQFEFVKVVKANFHFCCAIMFLITFEVVD 141

Query: 138 PIGTSTEFSPITFQAKVYYAIPIKDIIDVELCKPK 158
           P     +     FQ +V +A  I  + +   C+PK
Sbjct: 142 PYDNLIKL----FQTRVRHAEDI--VTEYVFCRPK 169

[Close]

BLAST of Csor.00g024560.m01 vs. TAIR 10
Match: AT1G50690.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06
Identity = 43/146 (29.45%), Postives = 66/146 (45.21%), Query Frame = 0


Query: 9   EEEEEEIDSDDEFYQDGYHTITKKEEREYFRAVEESEGFDVPDFGKVKVFSCSLIIPID- 68
           EEEEEE   +   Y +   +   ++ER      + S  +D     + ++  C  +I  D 
Sbjct: 22  EEEEEEDCEEMSSYSESTCSFDSEDERLVEEEYQRSGYYDFDTTKQRRLVFCYPVIFEDS 81

Query: 69  --MHENSWMLKEVRISANKAIEHYNKENGTNFEVVEIVKANHSGCCGSMYYITFNVKPIG 128
              H+       V   +  A++ YN +   N E+V  VKAN     G ++YITF  K   
Sbjct: 82  DVAHKPETDGDLVHRLSKIALQKYNDDKLENLELVRAVKANRKYGAGFIFYITFEAKDAN 141

Query: 129 TSTEFSPITFQAKVYYAIPIKDIIDV 152
           + T+  PITFQA V Y   I+ +  V
Sbjct: 142 SHTD--PITFQAAVRYLRGIETVYRV 165

[Close]

BLAST of Csor.00g024560.m01 vs. TAIR 10
Match: AT1G02770.1 (Protein of unknown function (DUF626) )

HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06
Identity = 39/143 (27.27%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 33  EEREYFRAVEESEGFDVPDF----GKVKVFSCSLIIPIDMHENSWMLKEVRISANKAIEH 92
           E  +Y+  V+ES+GFDV       G   +      +P   H +  +   V++ A+  +  
Sbjct: 20  EVEDYWARVDESDGFDVEGIQAPPGGTPLIHYDCHLPNSRHPDPVL---VKLYASAGLHR 79

Query: 93  YNKENGTNFEVVEIVKANHSGCCGSMYYITFNVK-PIGTSTEFSPITFQAKV-YYAIPIK 152
           YN   GTNF++V+++K N      S +YIT   + P+  S +    TFQ +V  + +   
Sbjct: 80  YNMLEGTNFKLVDVMKFNKLMMHLSPFYITLLAQDPVSRSQQ----TFQVQVDEHCLSTM 139

Query: 153 DIIDVELCKPKFFNLQSSLISDQ 170
           D + V + +PK  +   S+++ Q
Sbjct: 140 D-LTVLIARPKAVSTNESVLAPQ 154

The following BLAST results are available for this feature:

BLAST of Csor.00g024560.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX1	8.5e-05	27.27	UPF0725 protein At1g02770 OS=Arabidopsis thaliana OX=3702 GN=At1g02770 PE=2 SV=1	[more]
Q9LH42	7.2e-04	33.33	UPF0725 protein At3g19520 OS=Arabidopsis thaliana OX=3702 GN=At3g19520 PE=2 SV=1	[more]

BLAST of Csor.00g024560.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600691.1	4.51e-119	100.00	hypothetical protein SDJN03_05924, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942205.1	1.64e-102	93.13	uncharacterized protein LOC111447329 [Cucurbita moschata]	[more]
XP_023521681.1	2.60e-102	93.75	UPF0725 protein At4g29550-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942626.1	7.15e-102	93.13	UPF0725 protein At4g29550-like [Cucurbita moschata]	[more]
KAG6600694.1	2.51e-84	80.00	hypothetical protein SDJN03_05927, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Csor.00g024560.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVU0	7.96e-103	93.13	uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC1114473...	[more]
A0A6J1FPD6	3.46e-102	93.13	UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=...	[more]
A0A6J1FN74	7.52e-84	80.25	uncharacterized protein LOC111447330 OS=Cucurbita moschata OX=3662 GN=LOC1114473...	[more]
A0A6J1IL21	1.84e-79	75.63	uncharacterized protein LOC111475178 OS=Cucurbita maxima OX=3661 GN=LOC111475178...	[more]
A0A6J1IJT3	5.26e-79	75.63	uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320...	[more]

BLAST of Csor.00g024560.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37435.1	8.2e-11	33.55	Cystatin/monellin superfamily protein	[more]
AT1G63205.1	6.5e-08	31.45	Cystatin/monellin superfamily protein	[more]
AT1G63190.1	1.2e-06	29.03	Cystatin/monellin superfamily protein	[more]
AT1G50690.1	6.1e-06	29.45	Cystatin/monellin superfamily protein	[more]
AT1G02770.1	6.1e-06	27.27	Protein of unknown function (DUF626)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 74..149 e-value: 7.8E-10 score: 40.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31260	CYSTATIN/MONELLIN SUPERFAMILY PROTEIN	coord: 9..157
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 78..145
IPR006525	Cystatin-related, plant	TIGRFAM	TIGR01638	TIGR01638	coord: 82..157 e-value: 8.2E-10 score: 36.7
IPR000010	Cystatin domain	PFAM	PF00031	Cystatin	coord: 76..122 e-value: 2.2E-7 score: 31.1
IPR000010	Cystatin domain	CDD	cd00042	CY	coord: 76..136 e-value: 4.18903E-6 score: 41.6908

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g024560	Csor.00g024560	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.CDS01	Csor.00g024560.m01.CDS01	CDS
Csor.00g024560.m01.CDS02	Csor.00g024560.m01.CDS02	CDS
Csor.00g024560.m01.CDS03	Csor.00g024560.m01.CDS03	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.start_codon01	Csor.00g024560.m01.start_codon01	start_codon

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.initial01	Csor.00g024560.m01.initial01	initial

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.intron01	Csor.00g024560.m01.intron01	intron
Csor.00g024560.m01.intron02	Csor.00g024560.m01.intron02	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.internal01	Csor.00g024560.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.terminal01	Csor.00g024560.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01.stop_codon01	Csor.00g024560.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g024560.m01	Csor.00g024560.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity