CsaV3_7G023010.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023010.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 11915963 .. 11916272 (-)
Sequence length222
RNA-Seq ExpressionCsaV3_7G023010.1
SyntenyCsaV3_7G023010.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACTTGGTAAACTTTCCCTCATTTTTCTATCCTCCTTTTATCTAAAGCTTGTTCCAACATTTTCGACGAACCGATTTTGCCAATCTCCTCACAGGAAGTGAATTTGTGGGTGTAAATCTAGTCGGAGTCGTAAAGATCACGGCGCACAAGTTTTGGCTGCATGGAACCTATGTTCTCCGATTTTTGTGTCAGTCGCTATGGAACGACTTTCACCATTCACTATATAGCTTATTGTTTTTTGGATACTTCTTATTCCTTCTTCGTTTCGGATGTTTGCATTACAGTTTTAAACTCGACCCCACTTGA

mRNA sequence

ATGTTACTTGGAAGTGAATTTGTGGGTGTAAATCTAGTCGGAGTCGTAAAGATCACGGCGCACAAGTTTTGGCTGCATGGAACCTATGTTCTCCGATTTTTGTGTCAGTCGCTATGGAACGACTTTCACCATTCACTATATAGCTTATTGTTTTTTGGATACTTCTTATTCCTTCTTCGTTTCGGATGTTTGCATTACAGTTTTAAACTCGACCCCACTTGA

Coding sequence (CDS)

ATGTTACTTGGAAGTGAATTTGTGGGTGTAAATCTAGTCGGAGTCGTAAAGATCACGGCGCACAAGTTTTGGCTGCATGGAACCTATGTTCTCCGATTTTTGTGTCAGTCGCTATGGAACGACTTTCACCATTCACTATATAGCTTATTGTTTTTTGGATACTTCTTATTCCTTCTTCGTTTCGGATGTTTGCATTACAGTTTTAAACTCGACCCCACTTGA

Protein sequence

MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLRFGCLHYSFKLDPT*
Homology
[Close]
BLAST of CsaV3_7G023010.1 vs. NCBI nr
Match: KGN44297.1 (hypothetical protein Csa_015909 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR 60
          MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR
Sbjct: 1  MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR 60

Query: 61 FGCLHYSFKLDPT 74
          FGCLHYSFKLDPT
Sbjct: 61 FGCLHYSFKLDPT 73

[Close]
BLAST of CsaV3_7G023010.1 vs. ExPASy TrEMBL
Match: A0A0A0K7J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239590 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR 60
          MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR
Sbjct: 1  MLLGSEFVGVNLVGVVKITAHKFWLHGTYVLRFLCQSLWNDFHHSLYSLLFFGYFLFLLR 60

Query: 61 FGCLHYSFKLDPT 74
          FGCLHYSFKLDPT
Sbjct: 61 FGCLHYSFKLDPT 73

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023010.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44297.12.2e-34100.00hypothetical protein Csa_015909 [Cucumis sativus][more]
BLAST of CsaV3_7G023010.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023010.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7J41.0e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239590 PE=4 SV=1[more]
BLAST of CsaV3_7G023010.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_7G023010CsaV3_7G023010gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_7G023010.1.exon2CsaV3_7G023010.1.exon2exon
CsaV3_7G023010.1.exon1CsaV3_7G023010.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_7G023010.1.cds2CsaV3_7G023010.1.cds2CDS
CsaV3_7G023010.1.cds1CsaV3_7G023010.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_7G023010.1CsaV3_7G023010.1-proteinpolypeptide