CsaV3_7G022670.1 (mRNA) Cucumber (Chinese Long) v3
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATGATGTTTTGATAGGGACATTTACGAACAGTTTGGATCCAGTGATAATAATGGATGTTTTTGCAATGCGGACCGTGGGCCTGGAAAATATGATGGATGCGACCCAGTTGGATGAGAAGAAATTAGAAATGGCTCGGGCTTCTCAAGATGGCCGATGATGTTTTGATAGGGACATTTACGAACAGTTTGGATCCAGTGATAATAATGGATGTTTTTGCAATGCGGACCGTGGGCCTGGAAAATATGATGGATGCGACCCAGTTGGATGAGAAGAAATTAGAAATGGCTCGGGCTTCTCAAG ATGGCCGATGATGTTTTGATAGGGACATTTACGAACAGTTTGGATCCAGTGATAATAATGGATGTTTTTGCAATGCGGACCGTGGGCCTGGAAAATATGATGGATGCGACCCAGTTGGATGAGAAGAAATTAGAAATGGCTCGGGCTTCTCAAG MADDVLIGTFTNSLDPVIIMDVFAMRTVGLENMMDATQLDEKKLEMARASQX Homology
BLAST of CsaV3_7G022670.1 vs. NCBI nr
Match: KAE8646098.1 (hypothetical protein Csa_016781, partial [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. NCBI nr
Match: TYK17386.1 (gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 7.6e-10 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. NCBI nr
Match: KAA0038377.1 (gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. NCBI nr
Match: KAA0036997.1 (gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. ExPASy TrEMBL
Match: A0A5D3D378 (Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002460 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.7e-10 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. ExPASy TrEMBL
Match: A0A5D3BD16 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001350 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. ExPASy TrEMBL
Match: A0A5A7UV13 (Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00670 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. ExPASy TrEMBL
Match: A0A5D3DZ01 (Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00920 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_7G022670.1 vs. ExPASy TrEMBL
Match: A0A5A7T9X9 (Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002630 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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