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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG mRNA sequence ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG Coding sequence (CDS) ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGGGGAAGAAAGGGGCGTGTGGAGATTGGGAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG Protein sequence MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLAX
Homology
BLAST of CsaV3_7G003600.1 vs. NCBI nr
Match: KGN43560.2 (hypothetical protein Csa_020214, partial [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 5.7e-25 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query: 1 MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 60
MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA
Sbjct: 1 MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 60
BLAST of CsaV3_7G003600.1 vs. ExPASy TrEMBL
Match: A0A0A0K1L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043620 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.7e-19 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query: 13 MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 61
MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA
Sbjct: 1 MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 48
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN43560.2 | 5.7e-25 | 100.00 | hypothetical protein Csa_020214, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K1L4 | 8.7e-19 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043620 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G003600.1.exon1 | CsaV3_7G003600.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G003600.1.cds1 | CsaV3_7G003600.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_7G003600.1 | CsaV3_7G003600.1-protein | polypeptide |
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