CsaV3_7G000560.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G000560.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Auxin-responsive protein SAUR36-like
Location	chr7: 620914 .. 622093 (+)
Sequence length	456
RNA-Seq Expression	CsaV3_7G000560.1
Synteny	CsaV3_7G000560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAGAAAAGAGAGAGAGAGAGATCAGTGAACTAATTGCACGTTAAATCATTTTGTCTAATGAAGTTTACACCTTCACATGGGATTGACTACAAAATTAAGAACATACCGATCTCGTAATTATCTCCAACTTCATACCCTTTTTCATTTCTCCATCTCAAATCAACAATTCCCTCTCCATATATATATAGTGTATGTGCACACACACATACATGAATAATTAAACCCCCAAGTACTCCAACAAGAACCAAATCAAAACTTCCCAACGTTTTCCCCAGAAAAATTTTCAAGTTCCAGCAAAAATGTCGACCGGAATCGGTAAATCCAACAACATCCGCCGCATCGTGAGCATCCGCCAGATGCTGCAGCGGTGGAGGAAGAAGGCTCGAGTGACCGCGTCTTCTCGGCGCGCGGGTGATGCTCCGTCGGATGTTCCGGCGGGGCACGTGGCGATCTGTGTAGGAAGCAGTTGTAGAAGGTTCGTGGTTCGGGCTACTTATTTGAACCATCCAATCTTCCAGAAGCTCCTTTCGCAAGCGGAAGAGGAGTACGGATTCAGGAACCAAGGTCCTCTTGCGATTCCTTGTGAGGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCGGGTCGGTTTTTGAATCTTCAGGATATTCGTCGCCGCTGCCACGTCGACTCTCCGAGTGGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTACTGTTAGTAAAATGAAAGGGACGACTAACTGAAGATTCCGACTCGGGCTGATGAATCGGCCGAGTTCAACTCAACTCATTCGACTAACTTATTATTATGATTATTACTATTTTTTCCTTTTGAAATTTGATTTTTTTTTTAATATATGAAAAGAGAGAAATTATCATTATTTGTTTCAAAACAAATAAAGGAGATGGGTTAACTCGGTCACCGGGTGGTGAGTCAGCCCTCAGCCCGAGTCGAACCGGATAAAAGCTCATTAATTACTTCATGTACATTGTCATGCCTTTTCTCACCGATTACAAGAATGAAGCTTACATTTTTAATCTTGTCTTTCGAATAATTCATAATTTTGTCTCATCCTTTCCATTAATTTTCATGATAAATAATCTATTTGTAAAACACATGTGATATCTACCTATTCATTC

mRNA sequence

ATGTCGACCGGAATCGGTAAATCCAACAACATCCGCCGCATCGTGAGCATCCGCCAGATGCTGCAGCGGTGGAGGAAGAAGGCTCGAGTGACCGCGTCTTCTCGGCGCGCGGGTGATGCTCCGTCGGATGTTCCGGCGGGGCACGTGGCGATCTGTGTAGGAAGCAGTTGTAGAAGGTTCGTGGTTCGGGCTACTTATTTGAACCATCCAATCTTCCAGAAGCTCCTTTCGCAAGCGGAAGAGGAGTACGGATTCAGGAACCAAGGTCCTCTTGCGATTCCTTGTGAGGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCGGGTCGGTTTTTGAATCTTCAGGATATTCGTCGCCGCTGCCACGTCGACTCTCCGAGTGGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTACTGTTAG

Coding sequence (CDS)

ATGTCGACCGGAATCGGTAAATCCAACAACATCCGCCGCATCGTGAGCATCCGCCAGATGCTGCAGCGGTGGAGGAAGAAGGCTCGAGTGACCGCGTCTTCTCGGCGCGCGGGTGATGCTCCGTCGGATGTTCCGGCGGGGCACGTGGCGATCTGTGTAGGAAGCAGTTGTAGAAGGTTCGTGGTTCGGGCTACTTATTTGAACCATCCAATCTTCCAGAAGCTCCTTTCGCAAGCGGAAGAGGAGTACGGATTCAGGAACCAAGGTCCTCTTGCGATTCCTTGTGAGGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCGGGTCGGTTTTTGAATCTTCAGGATATTCGTCGCCGCTGCCACGTCGACTCTCCGAGTGGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTACTGTTAG

Protein sequence

MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQDIRRRCHVDSPSGLLRESRPLLFDFADKSVYC*

Homology

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BLAST of CsaV3_7G000560.1 vs. NCBI nr
Match: XP_004144827.1 (indole-3-acetic acid-induced protein ARG7 [Cucumis sativus] >KGN43195.1 hypothetical protein Csa_020388 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD
Sbjct: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. NCBI nr
Match: KAA0049684.1 (auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa] >TYK12188.1 auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRRA DAP+DVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIFQKLL QAEEEYGFRNQGPLAIPCEESVFEEVLR+VSRSESGRF+NLQD
Sbjct: 61  VVRATYLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. NCBI nr
Match: XP_008448020.1 (PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRRA DAP+DVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRAT+LNHPIFQKLL QAEEEYGFRNQGPLAIPCEESVFEEVLR+VSRSESGRF+NLQD
Sbjct: 61  VVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. NCBI nr
Match: XP_038888410.1 (indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRA--GDAPSDVPAGHVAICVGSSCR 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR+  GDAPSDVPAGHVAICVGSSCR
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGTGDAPSDVPAGHVAICVGSSCR 60

Query: 61  RFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNL 120
           RFVVRATYLNHPIFQKLL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSRS+SGRFLN 
Sbjct: 61  RFVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRSDSGRFLNF 120

Query: 121 QDIRRRCHVDSPSGLLRESRPLLFDFADKSV 150
           QD RRRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 QDFRRRCHVDSPSSLLRESRPLLFDFADKSV 151

[Close]

BLAST of CsaV3_7G000560.1 vs. NCBI nr
Match: KAG6572078.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011742.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-70
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSRSESGRFLNL D
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 149

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BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12
Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 34  SRRAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAI 93
           +RR+    S VP GHV + VG    RFVV A  LNHP+F  LL+++ +EYG+  +G L I
Sbjct: 40  TRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQI 99

Query: 94  PCEESVFEEVLRTV 108
           PC   VFE ++ ++
Sbjct: 100 PCHVLVFERIMESL 113

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BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 29  RVTASSRRAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLSQAEEEYGFRN- 88
           + + S+ +A     DV  G++A+ VG   RRFV+  +YLN P FQ LLSQAEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 89  QGPLAIPCEESVFEEV 104
            G L IPC E VF+ +
Sbjct: 70  NGGLTIPCSEDVFQHI 85

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BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 44  VPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEV 103
           VPAGHV + VG    RFVV A  +NHPIF  LL+++ +EYG+  +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 104 LRTV 108
           + T+
Sbjct: 114 VETL 117

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BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12
Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 11  IRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHP 70
           IRR+  +    Q    ++       +     S VP GHV + VG    RFVV A  LNHP
Sbjct: 5   IRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHP 64

Query: 71  IFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTV 108
           +F  LL Q+ +EYG+  QG L IPC   VFE +L ++
Sbjct: 65  VFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL 101

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.5e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 29  RVTASSR-RAGDAPSDVPAGHVAICVGSSCRRFVVRATYLNHPIFQKLLSQAEEEYGFRN 88
           R T S+R  A     D P G++A+ VG + +RFV+  ++LN P+FQ LLSQAEEE+G+ +
Sbjct: 9   RKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDH 68

Query: 89  -QGPLAIPCEESVFEEVLRTVS 109
             G L IPC E +F+ +   +S
Sbjct: 69  PMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL
Match: A0A0A0K0H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 9.8e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD
Sbjct: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL
Match: A0A5D3CM24 (Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001330 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRRA DAP+DVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIFQKLL QAEEEYGFRNQGPLAIPCEESVFEEVLR+VSRSESGRF+NLQD
Sbjct: 61  VVRATYLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL
Match: A0A1S3BJN8 (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRRA DAP+DVPAGHVAICVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRAT+LNHPIFQKLL QAEEEYGFRNQGPLAIPCEESVFEEVLR+VSRSESGRF+NLQD
Sbjct: 61  VVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 152
           IRRRCHVDSPSGLLRESRPLLFDFADKSVYC
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSVYC 151

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1I2L6 (auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.2e-70
Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIVKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSRSESGRFLNL D
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 150
             RRCHVDSP+ LLRESRPLLFDFADKSV
Sbjct: 121 FCRRCHVDSPTSLLRESRPLLFDFADKSV 149

[Close]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1GKR4 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.2e-70
Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVFEEVLR VSRSESGRFLNL D
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRIVSRSESGRFLNLPD 120

Query: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 149

[Close]

BLAST of CsaV3_7G000560.1 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 171.4 bits (433), Expect = 5.6e-43
Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           M+ G+GK + IR IV +RQML+RWR +AR+++S  R    PSDVP+GHVA+ VGSSCRRF
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRC--VPSDVPSGHVAVYVGSSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSE---SGRFLN 120
           VVRATYLNHP+ + LL QAEEE+GF NQGPL IPCEESVFEE +R +SRS+   S RF  
Sbjct: 61  VVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTC 120

Query: 121 LQDIRRRCHV---DSPSGLLRESRPLLFDFADKSVY 151
             D ++ CHV    S   L  ESRPLL    +K+V+
Sbjct: 121 PDDFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of CsaV3_7G000560.1 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 167.5 bits (423), Expect = 8.1e-42
Identity = 87/156 (55.77%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           M+  + K + IR IV +RQML+RWR KAR+++ SR     PSDVP+GHVA+CVGS CRRF
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSR---CVPSDVPSGHVAVCVGSGCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRF--LNL 120
           VVRA+YLNHPI   LL QAEEE+GF NQGPL IPCEESVFEE +R +SRS+S R      
Sbjct: 61  VVRASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTC 120

Query: 121 QDIRRRCH----VDSPSGLLRESRPLLFDFADKSVY 151
            D  ++C+    + S   L+ ESRPLL   A+K+++
Sbjct: 121 PDDLQKCNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of CsaV3_7G000560.1 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-40
Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60
           M+ GIGK + IR IV +RQML++WR KAR+++  R     PSDVP+GHVA+ VG SCRRF
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRR---SVPSDVPSGHVAVYVGRSCRRF 60

Query: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120
           VV ATYLNHPI   LL +AEEE+GF NQGPL IPCEESVFEE +R ++R  S RF    D
Sbjct: 61  VVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR--SSRFTCTDD 120

Query: 121 IRRRCH--VDSPSGLLRESRPLLFDFADKSV 150
           +++  H  + S   LL ESRPLL   ++K++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of CsaV3_7G000560.1 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 147.9 bits (372), Expect = 6.6e-36
Identity = 81/153 (52.94%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 5   IGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRFVVRA 64
           +GK+N I  +V IRQML++W+KKA + +S+    D  SDVP GHVA+ VG + RR+VVRA
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSN---NDPVSDVPPGHVAVSVGENRRRYVVRA 60

Query: 65  TYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSR----SESGR----FL 124
            +LNHPIF++LL++AEEEYGF N GPLAIPC+ES+FE+++  V+R    S SGR      
Sbjct: 61  KHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAA 120

Query: 125 NLQDIRRRCHVDSPSGLLRESRPLLFDFADKSV 150
            L+D+RR  HV      + ESRPLL   A+KSV
Sbjct: 121 TLEDLRRCSHVGLAKNNV-ESRPLLPGIAEKSV 149

[Close]

BLAST of CsaV3_7G000560.1 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 147.9 bits (372), Expect = 6.6e-36
Identity = 81/153 (52.94%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 5   IGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRFVVRA 64
           +GK+N I  +V IRQML++W+KKA + +S+    D  SDVP GHVA+ VG + RR+VVRA
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSN---NDPVSDVPPGHVAVSVGENRRRYVVRA 60

Query: 65  TYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSR----SESGR----FL 124
            +LNHPIF++LL++AEEEYGF N GPLAIPC+ES+FE+++  V+R    S SGR      
Sbjct: 61  KHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAA 120

Query: 125 NLQDIRRRCHVDSPSGLLRESRPLLFDFADKSV 150
            L+D+RR  HV      + ESRPLL   A+KSV
Sbjct: 121 TLEDLRRCSHVGLAKNNV-ESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of CsaV3_7G000560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144827.1	2.0e-79	100.00	indole-3-acetic acid-induced protein ARG7 [Cucumis sativus] >KGN43195.1 hypothet...	[more]
KAA0049684.1	2.7e-76	96.03	auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa] >TYK12188.1 auxi...	[more]
XP_008448020.1	8.0e-76	95.36	PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo]	[more]
XP_038888410.1	3.5e-71	92.72	indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]	[more]
KAG6572078.1	3.8e-70	91.28	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of CsaV3_7G000560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTV3	2.9e-12	44.59	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
P33083	3.8e-12	46.05	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SA49	6.5e-12	51.56	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
Q9SGU2	6.5e-12	39.18	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
P32295	8.5e-12	43.90	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]

BLAST of CsaV3_7G000560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0H1	9.8e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1	[more]
A0A5D3CM24	1.3e-76	96.03	Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BJN8	3.9e-76	95.36	auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=...	[more]
A0A6J1I2L6	9.2e-70	90.60	auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 S...	[more]
A0A6J1GKR4	9.2e-70	90.60	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3...	[more]

BLAST of CsaV3_7G000560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	5.6e-43	58.33	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	8.1e-42	55.77	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	1.5e-40	56.29	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	6.6e-36	52.94	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	6.6e-36	52.94	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..106 e-value: 1.3E-30 score: 105.4
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 7..143
None	No IPR available	PANTHER	PTHR31374:SF180	SMALL AUXIN-UP RNA-RELATED	coord: 7..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_7G000560	CsaV3_7G000560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G000560.1.exon1	CsaV3_7G000560.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G000560.1.cds1	CsaV3_7G000560.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G000560.1	CsaV3_7G000560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin