CsaV3_6G050070.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G050070.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Defensin-like protein
Location	chr6: 29194848 .. 29198828 (-)
Sequence length	420
RNA-Seq Expression	CsaV3_6G050070.1
Synteny	CsaV3_6G050070.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTGAGAGTTAATTAAAAGTAACTTTTCATTCAATATAATAAAGGTAAAAATGACATTTCACAGGAGAAAAAGGTTGGTGATGAATAAATTTACAAGAATGAGTGGTTGGGTTGTAGACTTTTGGGTTAATTTGGGAATTTTTCGAAAATGATCTGAATAAGAAAATAGAAAATTAAGAGAAAACAAAAGCAAATCGCATATTCGTTCCTTTTGGGCTCATCCTCAGCATTACAAAGAAGAAAACAATCGGCAGGGAGCGTTGAAGATTTGAAGGAGGCTGTGTATTATATGATGATACCGCAACAATGGGCGTCTCCTTGTGGCAACCAATGCACGCAGAAATACGCTGCCCTCACCCAGATTCCCTGTACATCTTTTTCCATCTTCCATTCTTACATAATTTTTCTCTATTTCGCTATAATCTTTACGCATTTCTTCGCTTATTTCATTACCCCATGTCCCAAGATTAGATGGCTGCGATTTGCTTTGTTAGTTTAAGAAACTTTCTCAATGCATAGCTAGAAACTCTATTCGTGAATGTTGGTCGAATGCGAAGTATCGTGGTGAGATGTTGAATTTCTCCTGTCTGGTTGGGTTATTAGTTGTTATTATTACACATGATTCTGCCAGGAAAGTGTATTTTGAATGAATCTGTTGATGGGAATCCGCGTATTTGTTATACTAATTGATTGTCGGAGAATATACTTGCAACTTATTGGGAATTTTAGGTTTTATGAAATCTATTTGTGATACGGATTAGGCCTCCTGTTATATTCATCTATTTGACTTGGGCAGCGAATAGTATTTGTTTACGAATAAAATTGTTAGTTTCACGTGTGATCCTTTGGAATCCGATACTAAGATACTTCGTTATACTAGAAGTTAGGGGATTATAATTAATGTCAGTTATGTTTATGTCTGAGTTTGAGTAGTCTTATAATACATTTTCTGCTTCTGCATAATCGCAATGGTCTCAACGTAGGGCGGGTATTTTGCAAAAAGGGGTGTGATGCAGATGGGGAGGCCTGGGACGAATGTGAGTAGTATTTTTCTTCTCTTCTTTTTCTTTTACCTTTACTTCACTATATATTCTATATGTTTCATCTAGATGTAATTTTCCTGCTTTCTGACTTGCAAGTTCGAGCATGTATTTCTTGTAGTTTTGTGTGATCTAATCTATTTTCTATCAAGTGTACATGCCATCACATTTGTGTGTTCAATTGATTAGCTTATTCAGATTCATCGAAAGTCTGGGGCACAGGGTGAACTTGGGTCGAATATGTCAACTTGCTATAGATATTTTCAGCAACGGTCATTCTAGACAGAAAATTATTGGTCCAACTGAAAATTTGTCTGCTTCCACTTTGATTTTTTCCCTCCTTTTTTTAATTTCTATTGAAGCAATAGACACTAGTGTTGAATAGCGTTATTATGACTTGTGGTAAATATCGGCATTTGGTGAACATTTTGCTGATATTTCTGTTTGAATGTATTTTTGTTAGACTAATATCTGGTCATGGAGTTCATTGAGCTTTTGTCTCTGTATTTTTCAATATTAATCATAGTGAGACTCGCTTTCTTAAAAAAAAAATCTGGTCATGGAGTTCATTATATATCTTGATACGTTGTAACTTTGACCAGTTATTAATACGTTTTTAGTGATTAGGAAATCTTTATAGAAAAACTTCCTTGTTGCTACAACTTTAAGACCTTGGAAATCTGTTACCTTTCAACTTTTTTATGTTATTCATCAATATAAATTGTTGCTGTCATTGAGTCGCAAGGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGTACTTAAGTGTCTTGTTATTTTCTGGCGTTTTCTTTGACTCTGATGGTTTCACCGTACTTGAGATTTAAACCTTAATCTTCACAAGTTCAACATTTAAGTAATCCACTTGTCTGTTAATCAACAAACCTGCTCTTTCCTCTTCCTCTTTCCGCCCAACTCTGACAGAAGTTATGTGAACTAGGAAGATTCTCAGTTAATTTATATATAGTATCTTCTGTTACAGACAGTGTATTTTGTTTTACTTGCTTTTGGATTTTGACTCCTTGCTGCTCGCAGGAATGTTTCCATGCATGTGTATCTGGTTGCGGCTTTAAGGTAAGTGTTATTTTATGAAGATTAAGTAATTTAAGTATGGTCACTCTTGCTGGAAGTCGATGAAAAGTGACTGTGGGATGTTGTAGTCGAAAAACTTATTTTATATGCTTCGTAAAGTGTCCTAGTCCAAGTTATGATCTGTAGTTCAGTTCAAAAATCCTCTGGTATTATATTGCTGTGGGGATGAAGTACTCTGGCGTGTCAAAAACCAGAATTGTATGTTTGAGGAAACACAACTTTGTCATGATTTAAAACCTTAAACCTAATCGTGGACATGAAACTCTTTGCATTCATTTGTCTGTTATTCATGCCTTACAGTACTAGTGCCTGATCTTTGCAGCATGATTTTCCATATGTATTCAGCCTGTATTTGCAGCAGGACATCAACATTGTCATTAAAGGACAAATACTTGAAAATCGTGTTATCCTTCCTGTTCGTTCTTCCAAGCATTACCTAGTTAAAATCCAGCAAACACATTCACTTCTCTGCTAATGCTTGCCATTGTTATTGTTTTACACTTTGACTTGTGTTTAATATTTAACAATTCTATGTTCCTGGTGTTGTAGTCTTAGTTGATCTGATGACATTTCTATTCTCGATCAGTTTGAGGTTGAACCAGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAACCAGCACCTGTTGTTTCGAAACCCTCCCCACGACCTCCAATCACTGAATCAATTGCCAAAAATGAAGACTTGCCAAGCACTTCTGCATAGCTGCATAGCATCATACAATGCCAATAAAAAAGGAAACCTGACGCATCAAAATTATAGTCAGTCTGTTAGGTTATAGTTTTCTTTTAGCCTCTAAATATTCCTATGAAAATCCTTCTGACCGACAACTTTAATTCCAATGCAGGCTTACATCTCCCGTTGCTATGTTTTCCCCCTCGCGGGCTTCCATATTCTGTTGGATTATAAATTATGACAGTTACTTGTAAGTTTTAGTCCTTCCTTGCCTGTGAAAGGACTTAGGTCTTTGACATAGATATTTGTCCTGTATGTTGAGAGTTGCTAATAGCCTGCCTTGATGTAGCTACCACTCTGGCTTCAAAAGTTGGAGAATTTTGTGAAACGTTAATTTAGTATGGCGAATTGGGGAATTGGGCAACTTGTTGTTTCGGAAGAGAAGTAAATTTCCGCTGTAGCTTGTCTTTCTTTTGTGTTTTTACAAAATTAGCTCGTAAAAGTAAATTAGCAGGATTCAATTCATTAGGGATTTGAGAAATATAGTTTTCATATACTTTTTTTTTCATTGAAACCGAGAGTTGGGTCTTTGGGAGATGTTCTCCGACTCCCAACCTGAAATTGCTGTTTAGATGATCTGCTTCTAAGTTCCAGTGTTGTTTCTCTATTTCAACAAATGTTATTTTATAGGTGGATTTACCCATAACGAGAGGAAGACCAATTTCTATGAGTTTTGTTATATCTTTTAACGTCCCTGGAAACAAAATGTTGGGCAATTTGAAAAGTTACGTTAGTAAGTTGTCTCCACGAGACATAATTTCTCATTACTTGCCCACATATGTGGTCAAGTTACTTGGTGACCAATGGGATTGAGGCCCAAATACTTGGCCTATATGATAACTTCAGAGTGAGCTCAACAATGTGTGGAAGTAAAGAGTGCTCTACTTATACCAAACCATTTAATTTTTTAAATAATAAAAGACAAGTATATAGTTTTTTTTTTTCTTTTTGTAAAATAATTCACACTTTTTAGCTCAATGATATGTGGAGATAAAG

mRNA sequence

ATGATGATACCGCAACAATGGGCGTCTCCTTGTGGCAACCAATGCACGCAGAAATACGCTGCCCTCACCCAGATTCCCTGGCGGGTATTTTGCAAAAAGGGGTGTGATGCAGATGGGGAGGCCTGGGACGAATGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGAATGTTTCCATGCATGTGTATCTGGTTGCGGCTTTAAGTTTGAGGTTGAACCAGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAACCAGCACCTGTTGTTTCGAAACCCTCCCCACGACCTCCAATCACTGAATCAATTGCCAAAAATGAAGACTTGCCAAGCACTTCTGCATAG

Coding sequence (CDS)

ATGATGATACCGCAACAATGGGCGTCTCCTTGTGGCAACCAATGCACGCAGAAATACGCTGCCCTCACCCAGATTCCCTGGCGGGTATTTTGCAAAAAGGGGTGTGATGCAGATGGGGAGGCCTGGGACGAATGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGAATGTTTCCATGCATGTGTATCTGGTTGCGGCTTTAAGTTTGAGGTTGAACCAGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAACCAGCACCTGTTGTTTCGAAACCCTCCCCACGACCTCCAATCACTGAATCAATTGCCAAAAATGAAGACTTGCCAAGCACTTCTGCATAG

Protein sequence

MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKDHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPRPPITESIAKNEDLPSTSA*

Homology

[Close]

BLAST of CsaV3_6G050070.1 vs. NCBI nr
Match: XP_004134712.1 (uncharacterized protein LOC101206260 [Cucumis sativus] >KAE8647688.1 hypothetical protein Csa_003744 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK
Sbjct: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP
Sbjct: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPITESIAKNEDLPSTSA
Sbjct: 121 RPPITESIAKNEDLPSTSA 139

[Close]

BLAST of CsaV3_6G050070.1 vs. NCBI nr
Match: XP_008439869.1 (PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo] >XP_008439871.1 PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 4.6e-78
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK
Sbjct: 48  MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 107

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           +HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP
Sbjct: 108 NHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 167

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPITESIAKNEDLPSTSA
Sbjct: 168 RPPITESIAKNEDLPSTSA 186

[Close]

BLAST of CsaV3_6G050070.1 vs. NCBI nr
Match: XP_038883449.1 (uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida] >XP_038883450.1 uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 8.7e-77
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAW+ECLEECTEICYKDPVFK
Sbjct: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWEECLEECTEICYKDPVFK 60

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           DHQWSAYIDRSPGSASYSEECFHACVSGCGFKF+VEPEKADKIQPNRPAKP PVVSKPSP
Sbjct: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFDVEPEKADKIQPNRPAKPVPVVSKPSP 120

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPI ESIAKNEDLPSTSA
Sbjct: 121 RPPIAESIAKNEDLPSTSA 139

[Close]

BLAST of CsaV3_6G050070.1 vs. NCBI nr
Match: XP_022142369.1 (uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142370.1 uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142371.1 uncharacterized protein LOC111012509 [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCT KYAALTQIPWRVFCKKGCDADGE W+ECLEECTEICYKDPV K
Sbjct: 1   MMIPQQWASPCGNQCTHKYAALTQIPWRVFCKKGCDADGEDWEECLEECTEICYKDPVLK 60

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           DHQWSAYIDRSPG+ASYSEECFHACVSGCGFKFEV+ EKADKIQPNRP KPAPVV  PSP
Sbjct: 61  DHQWSAYIDRSPGAASYSEECFHACVSGCGFKFEVDSEKADKIQPNRPVKPAPVVPTPSP 120

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPITES  KNEDLPSTSA
Sbjct: 121 RPPITESNTKNEDLPSTSA 139

[Close]

BLAST of CsaV3_6G050070.1 vs. NCBI nr
Match: XP_022926758.1 (uncharacterized protein LOC111433786 [Cucurbita moschata] >XP_023003188.1 uncharacterized protein LOC111496877 [Cucurbita maxima] >XP_023518775.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo] >XP_023518776.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 7.9e-70
Identity = 121/138 (87.68%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61
           MIPQQW+SPCGNQCTQKYAALT+IPWRVFCKKGCDADG+AW+ECLEECTEICYKDPVFKD
Sbjct: 1   MIPQQWSSPCGNQCTQKYAALTKIPWRVFCKKGCDADGDAWEECLEECTEICYKDPVFKD 60

Query: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121
           HQWSAYIDRSPGSASYSEECFHAC SGCGFKF+V+   ADKIQ NRP KP P+VSKP+PR
Sbjct: 61  HQWSAYIDRSPGSASYSEECFHACASGCGFKFDVDSGTADKIQANRPVKPVPIVSKPAPR 120

Query: 122 PPITESIAKNEDLPSTSA 140
           PPITE +AKNEDLPSTSA
Sbjct: 121 PPITEPVAKNEDLPSTSA 138

[Close]

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL
Match: A0A1S3AZC9 (uncharacterized protein LOC103484528 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484528 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK
Sbjct: 48  MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 107

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           +HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP
Sbjct: 108 NHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 167

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPITESIAKNEDLPSTSA
Sbjct: 168 RPPITESIAKNEDLPSTSA 186

[Close]

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL
Match: A0A6J1CKR8 (uncharacterized protein LOC111012509 OS=Momordica charantia OX=3673 GN=LOC111012509 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.0e-72
Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MMIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFK 60
           MMIPQQWASPCGNQCT KYAALTQIPWRVFCKKGCDADGE W+ECLEECTEICYKDPV K
Sbjct: 1   MMIPQQWASPCGNQCTHKYAALTQIPWRVFCKKGCDADGEDWEECLEECTEICYKDPVLK 60

Query: 61  DHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSP 120
           DHQWSAYIDRSPG+ASYSEECFHACVSGCGFKFEV+ EKADKIQPNRP KPAPVV  PSP
Sbjct: 61  DHQWSAYIDRSPGAASYSEECFHACVSGCGFKFEVDSEKADKIQPNRPVKPAPVVPTPSP 120

Query: 121 RPPITESIAKNEDLPSTSA 140
           RPPITES  KNEDLPSTSA
Sbjct: 121 RPPITESNTKNEDLPSTSA 139

[Close]

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL
Match: A0A6J1KVS0 (uncharacterized protein LOC111496877 OS=Cucurbita maxima OX=3661 GN=LOC111496877 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70
Identity = 121/138 (87.68%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61
           MIPQQW+SPCGNQCTQKYAALT+IPWRVFCKKGCDADG+AW+ECLEECTEICYKDPVFKD
Sbjct: 1   MIPQQWSSPCGNQCTQKYAALTKIPWRVFCKKGCDADGDAWEECLEECTEICYKDPVFKD 60

Query: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121
           HQWSAYIDRSPGSASYSEECFHAC SGCGFKF+V+   ADKIQ NRP KP P+VSKP+PR
Sbjct: 61  HQWSAYIDRSPGSASYSEECFHACASGCGFKFDVDSGTADKIQANRPVKPVPIVSKPAPR 120

Query: 122 PPITESIAKNEDLPSTSA 140
           PPITE +AKNEDLPSTSA
Sbjct: 121 PPITEPVAKNEDLPSTSA 138

[Close]

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL
Match: A0A6J1EJ45 (uncharacterized protein LOC111433786 OS=Cucurbita moschata OX=3662 GN=LOC111433786 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70
Identity = 121/138 (87.68%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61
           MIPQQW+SPCGNQCTQKYAALT+IPWRVFCKKGCDADG+AW+ECLEECTEICYKDPVFKD
Sbjct: 1   MIPQQWSSPCGNQCTQKYAALTKIPWRVFCKKGCDADGDAWEECLEECTEICYKDPVFKD 60

Query: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121
           HQWSAYIDRSPGSASYSEECFHAC SGCGFKF+V+   ADKIQ NRP KP P+VSKP+PR
Sbjct: 61  HQWSAYIDRSPGSASYSEECFHACASGCGFKFDVDSGTADKIQANRPVKPVPIVSKPAPR 120

Query: 122 PPITESIAKNEDLPSTSA 140
           PPITE +AKNEDLPSTSA
Sbjct: 121 PPITEPVAKNEDLPSTSA 138

[Close]

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL
Match: A0A2P5FE53 (Defensin-like protein OS=Trema orientale OX=63057 GN=TorRG33x02_080030 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.7e-58
Identity = 104/138 (75.36%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61
           MIPQQW+SPCG+QCTQKYAALTQIPWRVFCKKGCD+DGE+W ECL+ECTEICYKDPV KD
Sbjct: 1   MIPQQWSSPCGSQCTQKYAALTQIPWRVFCKKGCDSDGESWQECLDECTEICYKDPVLKD 60

Query: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121
            QWSAYIDRSPG+ SYSEECF ACVSGCG+KF+V+PE+ DK++PNRP KP P    P P 
Sbjct: 61  RQWSAYIDRSPGADSYSEECFFACVSGCGYKFDVQPEEVDKVRPNRPPKPPPA---PKPV 120

Query: 122 PPITESIAKNEDLPSTSA 140
            P  E   + EDLPSTSA
Sbjct: 121 SPPVEPKQRTEDLPSTSA 135

[Close]

BLAST of CsaV3_6G050070.1 vs. TAIR 10
Match: AT4G21720.1 (unknown protein; Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi - 93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288 (source: NCBI BLink). )

HSP 1 Score: 193.7 bits (491), Expect = 9.7e-50
Identity = 86/142 (60.56%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61
           MIPQQW  PCG++CT KY+A TQ+PWRVFCKKGCDAD ++W++C+ +C+EICYKDPV KD
Sbjct: 1   MIPQQWTPPCGSKCTNKYSAFTQLPWRVFCKKGCDADSDSWEDCVGDCSEICYKDPVLKD 60

Query: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121
             W+A IDRSPG A YSEECFHACV+GCG+KF+VE E  +K++P RP  P P   KP P 
Sbjct: 61  RPWTAVIDRSPGDAKYSEECFHACVAGCGYKFDVEAEIVNKVKPKRPPPPPP---KPQPP 120

Query: 122 PPITES----IAKNEDLPSTSA 140
           PP   S        ED+ +TSA
Sbjct: 121 PPPPRSQKPMQPPTEDVLATSA 139

[Close]

BLAST of CsaV3_6G050070.1 vs. TAIR 10
Match: AT4G21720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. )

HSP 1 Score: 111.3 bits (277), Expect = 6.3e-25
Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 48  ECTEICYKDPVFKDHQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNR 107
           +C+EICYKDPV KD  W+A IDRSPG A YSEECFHACV+GCG+KF+VE E  +K++P R
Sbjct: 15  DCSEICYKDPVLKDRPWTAVIDRSPGDAKYSEECFHACVAGCGYKFDVEAEIVNKVKPKR 74

Query: 108 PAKPAPVVSKPSPRPPITES----IAKNEDLPSTSA 140
           P  P P   KP P PP   S        ED+ +TSA
Sbjct: 75  PPPPPP---KPQPPPPPPRSQKPMQPPTEDVLATSA 107

The following BLAST results are available for this feature:

BLAST of CsaV3_6G050070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134712.1	1.2e-78	100.00	uncharacterized protein LOC101206260 [Cucumis sativus] >KAE8647688.1 hypothetica...	[more]
XP_008439869.1	4.6e-78	99.28	PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038883449.1	8.7e-77	97.12	uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida] >XP_03888345...	[more]
XP_022142369.1	1.4e-71	91.37	uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142370.1 uncha...	[more]
XP_022926758.1	7.9e-70	87.68	uncharacterized protein LOC111433786 [Cucurbita moschata] >XP_023003188.1 unchar...	[more]

BLAST of CsaV3_6G050070.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G050070.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZC9	2.2e-78	99.28	uncharacterized protein LOC103484528 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CKR8	7.0e-72	91.37	uncharacterized protein LOC111012509 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1KVS0	3.8e-70	87.68	uncharacterized protein LOC111496877 OS=Cucurbita maxima OX=3661 GN=LOC111496877...	[more]
A0A6J1EJ45	3.8e-70	87.68	uncharacterized protein LOC111433786 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A2P5FE53	5.7e-58	75.36	Defensin-like protein OS=Trema orientale OX=63057 GN=TorRG33x02_080030 PE=4 SV=1	[more]

BLAST of CsaV3_6G050070.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21720.1	9.7e-50	60.56	unknown protein; Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4;...	[more]
AT4G21720.2	6.3e-25	57.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..139
None	No IPR available	PANTHER	PTHR36053	OSJNBB0017I01.18 PROTEIN	coord: 2..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G050070	CsaV3_6G050070	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G050070.1.exon5	CsaV3_6G050070.1.exon5	exon
CsaV3_6G050070.1.exon4	CsaV3_6G050070.1.exon4	exon
CsaV3_6G050070.1.exon3	CsaV3_6G050070.1.exon3	exon
CsaV3_6G050070.1.exon2	CsaV3_6G050070.1.exon2	exon
CsaV3_6G050070.1.exon1	CsaV3_6G050070.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G050070.1.cds5	CsaV3_6G050070.1.cds5	CDS
CsaV3_6G050070.1.cds4	CsaV3_6G050070.1.cds4	CDS
CsaV3_6G050070.1.cds3	CsaV3_6G050070.1.cds3	CDS
CsaV3_6G050070.1.cds2	CsaV3_6G050070.1.cds2	CDS
CsaV3_6G050070.1.cds1	CsaV3_6G050070.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G050070.1	CsaV3_6G050070.1-protein	polypeptide