CsaV3_6G038780.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038780.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Cucumber peeling cupredoxin
Location	chr6: 22197775 .. 22202408 (+)
Sequence length	711
RNA-Seq Expression	CsaV3_6G038780.1
Synteny	CsaV3_6G038780.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATGTTAGACCATGATAAACTTAAACATACTACCTATCACGATAGAAAGAAACAATAATCTATCACAATCGAGATTATGATATTTTACTATATTTATTATTATTTTACTTCATTTCATTATATATAAAAATAACAGCAAAAGTGATGATCAGCGAGAGCAATTAGAGGATAAATGAAGGGTATGTTAGCAAATGGTATATAGCTGGCAGCACAAGAGAAGCATGGTATTTCACTAAAGTGAAGACTACATACATCCTCTTCAGCACACCCAAATTTCCTCAGTACTTCTCATTCCCTTCCAATAATTCACAAATCCCTAGAAGAATTTAATGGAACTCAGAAAGTACAAACCTGCCTTCCTCCTCCTCCTCTTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAGGAATGGACCGCCGGTAAAACCTTCGGCCTCGGTGATTTTCTAAGTAAGTTATTCTAATTCCCCTGTTTTCTCTAATTAATCATGCTTCGCAATGACTCTTTGCTCTCTCTGTTAATTCCTGTTTTGATTTCGTAAACTCTCTCTCTCTGGATATTTCGAATTCTCTGTTTTTGATTTTTGATTCATCTTTTCACGAACTTGAAAATTCGGATCGCGGTTTTTCTAAGAACTCGTAAATTTCACGTGATTCGATTTTGTGAATCCTCTCGTTCAAGTTTAGCATCTATGTTTTTGGTTTTGAATTAAAACTTTTATTGCTTATCGTTTTCTCGAAAATGTGTGGTCCTTGTGCAATTTTTCTTGTTGTTTCAATCGATCTCTTTACTTCTTTTTCGTGTGTTTTTCTTTTTATTGTATCGATATAATTCTTACCTAATTAATTAATTTTTGTTAGTTTTCCTCTCTCTCTCTATATATATTGTTTTTACCTTTAGAAAAAACCTCTAAATATAACTTTTGTGTTTTTTTCATCATAAACTATGATAAATTTTAGCATAACAGAAAAAATATCAAACTATTTACCAATATAGTAAAAAAAAAATTGATTGGTAGACACAAATATTCTTGTTTATAATAAATTTATATTCATATTCATCAACTTTTATTAAAAATAATCATTCTATAAACTACTTTTCTAATAGACTTCTATTCACATTTATTGTAACAGTAATTAATAATTAATGACTAAAAAATTATTTATAGTAAATAACTAAAAAATTTATATAGTTTGATCAATAATGTTCTTAATTTTAAAGTACATTTCTTTAAAAAAATTAATTTCATAGTGATTGAGATTATAATAACAAAAACTCAACCAATATTTTAAACAAATCACAATGGAACAAATTTGACTTTGGTACGTCACTTTTTAACCTAACGTGTGAAATTTGGCGGTTTTAAATCATTGATTTGAATAATTTCCACTCATGCAATTACATTGTTATAATCAAATAACAATAATAACGCGATGATGATTTCTATTATTAGCATTAATTCTATACTTTATAATGTTTGCGTCATATCCACACAACCAATTTTAACATCATAATAACTAATAACTTTATTGAGTAACTTTTCTTTGAAGGTTGAATTTTGTATATTTAATATTCTAAATATAAATGTAGTAAGTAAAAAAAAAAAGTACATGGTTTATTTTCTGAAAATGGAGTTTCGATTTTAGTTGGTTTTGGATAGTAAATGGTTGAAAAGAGAAAGTTCAATAATACAAAGAGAAACCCTATTTTGTTTTTAAATTTTTTTATATATATTATCGAAGTCAAAAATTAAAGAAATAAATAAATAGATAGCACCAACCGTACGTACCCCATGTTGTTTTTTTTTCTTGGAGAATGATTTTGACAGCTAAACTAACATGACGGTGCCTATTTCCATATTGATTTTATTCAAATTATAGATTTAATCATCCAACTTTATAGTTCAATGTTATTTTCTTTTTAATTAAAAGCTTAGAACTTTCATTAAACATCGCATTCGAACTTGTATCTTAATTTCATACTAATTTCAAAACTTTAAACATATCATAAATATTAGGAGTAAACATTTGTTGATTATAGTCGATTTTTTTATCAAATCACACATCGAACCAACTAAACTATGGTCGATTTGATATACGTTTAAATTAATCTAGAATAAAAAATTAGTTTGTTAGTTTACTTCCTTAATGAACTTTTTTGATTTAAAATTTTTCGACTATTAATATTGAAATTTTTAAAAATTAATAAAATAAAATAAAATATCTACATGTTATATTATAATATAGAACGACAAAAATCCATAGATTTTTATCACATAGTCTATCAATATTGAATATTAAAATTTGCTATATGCTTAACTTTTTTTTCTGTCAAATTTGATATATTTTTTTTTCACAATTCTTCACTAATATTTTAAAACAAATAAAATGATTTCAATTAGTGGACTAAAACTGTAATTGGACTTTACTTTTTGTTTCTAAATTACATATACAATTTCAAAGTTTTTAAAGATATCGTAAATAGTTTTAATATCAATTTAAATGTTTAGAGGTCTATTAATATTTGAAAAGAAATTGACTACAATTAGTGGACTAAATTTTTAATTTGACTTTATCTTTTTTTAAAAAAAATAAATTTTTTGTTTAATTTTACTTTTTGTTTTTCTAATGTTTGCACCATGCACGCAACTGTGGTATTCTTAAGCTAGCTTGTACCACGTGTTGGGATACAATTGGTTGTTAAAGAGAAATGTCGGCAATGCACATGCATGTGATTGCGTGTCATCCATGTGCCGCTTTGTTGTAAAGCTCTAAACTTCGAATGCCGTAAAAACTTATTTTGATTTTTTTTTAGTACGAAAGTTCATCCCTTAATTTTCTTTGAAGTACAAACATTTAGTGAATTTTTAAATCTTACAAATAATTGTTTGGTTAAATTGCAAATTTTGTCTCGTAGAGATCTAGGTAGGTTGGAATCAATAAAAAAAAAAGTATTTTTCAAAAACTCATTTTTATTTAAATGTTCTTGTTCAACCGCTTAAAATACACTATTTTTCTAAAATATGACATTTTTTAAAAAATAAAACACTTGAGGATGAATTCCATTAAAAAAAAAAAAGAACCTTTTATCAAATTAAAAAAAAAAGAACCTTTTATCAAATTAAAAAAACTAAGTTATAATTTAAAACAATTTTATTACAATTATAGAGACCCCGTTTAATTTTATAGCTTTTGTTTTTATTAGTGTTTGATATCAAATTTTATGTCTACTAAAAAGAAGGTGTTGTGAATTTGAAATATGAAGAATATATTTGATAACTAGTTAGTTTTTTCAGAAATAAGCTAGTAATTCATCAACATTACTTCCCTCTCTAGTCTTAGTTCAAAACAAAAACAAAAAATATAGAGATACTATTGAAAACAAAGTAAGTTTTTGAAAACTAAAAAAAAGTCTATTTTATAAAAATACTATTATTAAAACAAATTATAAGAAAATATATAGAACTAGGAAAAACAAACACACATACACAGAGAAAAAATCACGTAGTTATAATCCAATAGAGTTGAAAGTAATTCATTGATTGTATCAAATTTCATGTCTATTGCGTGGAGAGAGAAAATCGTGAAGTTGAGAAAATTAAAAGCTTTATTTCATAACCCATAATCATTTAGTTTTTATTTTTTTAGTTATCTAATAATCATATGCTTATTTTATTCTTTAGAAAGTAGTAATGCTTAATCTTAATCTTCTTCTTCTTTTGGATAAACTGATTATTTGAGGGTTGAAAACAAAATTTACAAAAACGTTATGATATTCGTTATTTTGCAGTTTTCAACACGGACAACAACCACTCGGTTGTGCAAACATACAATGTCACCACATACAAGCTTTGTGACTACGACGACGCATCAGATCACGATACGACGGAATGGTCTGCCGCTGATCCGTCCGCAACCACTCCCTACCCCGTCACGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTACTTCTTCTCTGGCAACTACGACGGAGAGCAGTGCCAAAATGGGCAACAGTTCAACATAAATGTCACCCATGGACAGGGCCTCCCTAAAAGCATGAGAGATCCTTCGGAGGAAGCTCCGGCTCCGGTAGTTCCTGACACCGGCGATCAAACCGAATCTGCACCAGACACCATTATCCCTTCCAGCTTCGACAATCCTCGAAACGATGTGGCCGATAATAATAACGATAAGGAATCTTCCGGCTCCAATTCGTTATCGCTTATTTATTGCTTCAAGTTTAATGAGTTTTTGTTCTTGTTAGTTGGTATTGCTTCTGCCTGCTTTTTGTCTTTGTACTGAGTGATTTTGTTTTTATTGCTATATTTATTTTTTATTTAATTGTTACGTTCTTCAATATTCAAATAATGTGGGTTTTCTCTTTTCTTGGTGTTCAAGCAATACATACTATATATATATAGTTAGCTCTATCGTAGGTTTTCCTTAGGGTTTTCTTCACTCTTTTTGTGCATTTATATACAAAATTATATAATGTAATAATGGATTGATCATATAATTGAGAGTGTGAGTACACCATTTTATGTTTTTTTTTT

mRNA sequence

ATGGAACTCAGAAAGTACAAACCTGCCTTCCTCCTCCTCCTCTTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAGGAATGGACCGCCGGTAAAACCTTCGGCCTCGGTGATTTTCTAATTTTCAACACGGACAACAACCACTCGGTTGTGCAAACATACAATGTCACCACATACAAGCTTTGTGACTACGACGACGCATCAGATCACGATACGACGGAATGGTCTGCCGCTGATCCGTCCGCAACCACTCCCTACCCCGTCACGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTACTTCTTCTCTGGCAACTACGACGGAGAGCAGTGCCAAAATGGGCAACAGTTCAACATAAATGTCACCCATGGACAGGGCCTCCCTAAAAGCATGAGAGATCCTTCGGAGGAAGCTCCGGCTCCGGTAGTTCCTGACACCGGCGATCAAACCGAATCTGCACCAGACACCATTATCCCTTCCAGCTTCGACAATCCTCGAAACGATGTGGCCGATAATAATAACGATAAGGAATCTTCCGGCTCCAATTCGTTATCGCTTATTTATTGCTTCAAGTTTAATGAGTTTTTGTTCTTGTTAGTTGGTATTGCTTCTGCCTGCTTTTTGTCTTTGTACTGA

Coding sequence (CDS)

ATGGAACTCAGAAAGTACAAACCTGCCTTCCTCCTCCTCCTCTTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAGGAATGGACCGCCGGTAAAACCTTCGGCCTCGGTGATTTTCTAATTTTCAACACGGACAACAACCACTCGGTTGTGCAAACATACAATGTCACCACATACAAGCTTTGTGACTACGACGACGCATCAGATCACGATACGACGGAATGGTCTGCCGCTGATCCGTCCGCAACCACTCCCTACCCCGTCACGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTACTTCTTCTCTGGCAACTACGACGGAGAGCAGTGCCAAAATGGGCAACAGTTCAACATAAATGTCACCCATGGACAGGGCCTCCCTAAAAGCATGAGAGATCCTTCGGAGGAAGCTCCGGCTCCGGTAGTTCCTGACACCGGCGATCAAACCGAATCTGCACCAGACACCATTATCCCTTCCAGCTTCGACAATCCTCGAAACGATGTGGCCGATAATAATAACGATAAGGAATCTTCCGGCTCCAATTCGTTATCGCTTATTTATTGCTTCAAGTTTAATGAGTTTTTGTTCTTGTTAGTTGGTATTGCTTCTGCCTGCTTTTTGTCTTTGTACTGA

Protein sequence

MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY*

Homology

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BLAST of CsaV3_6G038780.1 vs. NCBI nr
Match: XP_004140182.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN48076.1 hypothetical protein Csa_003357 [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 2.5e-132
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL 60
           MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL
Sbjct: 1   MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL 60

Query: 61  GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK 120
           GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK
Sbjct: 61  GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK 120

Query: 121 EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD 180
           EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD
Sbjct: 121 EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD 180

Query: 181 TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY 237
           TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY
Sbjct: 181 TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY 236

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BLAST of CsaV3_6G038780.1 vs. NCBI nr
Match: KAA0061753.1 (cucumber peeling cupredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 434.1 bits (1115), Expect = 7.7e-118
Identity = 215/243 (88.48%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MELRKYKP-------AFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWT 60
           MELRKYKP         LLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQ+WT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVT 120
           AGKTFGLGDFLIFNTDNNHSVVQTYN TTYKLCDYDDA ++DTTEWSAADPSATTPY V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDAPENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGD 180
           VAVPLVKEGPNYFFSGNYDGEQCQNGQQF INVTHGQGLPKSM DPS+EAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFL 237
           QTE+APDTI+PSSFDNPRNDVAD  NDKESS SNS+SL+YCFKFNEF FLL+GIASACFL
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVAD--NDKESSSSNSISLVYCFKFNEFFFLLIGIASACFL 240

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BLAST of CsaV3_6G038780.1 vs. NCBI nr
Match: XP_008449619.1 (PREDICTED: cucumber peeling cupredoxin [Cucumis melo] >TYJ96093.1 cucumber peeling cupredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117
Identity = 215/243 (88.48%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MELRKYKP-------AFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWT 60
           MELRKYKP         LLLL LSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQ+WT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLLLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVT 120
           AGKTFGLGDFLIFNTDNNHSVVQTYN TTYKLCDYDDAS++DTTEWSAADPSATTPY V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGD 180
           VAVPLVKEGPNYFFSGNYDGEQCQNGQQF INVTHGQGLPKSM DPS+EAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFL 237
           QTE+APDTI+PSSFDNPRNDVAD  NDKESS SNS+SL+YCFKFNEF FLL+GIASACFL
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVAD--NDKESSSSNSISLVYCFKFNEFFFLLIGIASACFL 240

[Close]

BLAST of CsaV3_6G038780.1 vs. NCBI nr
Match: XP_023512118.1 (uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 4.9e-104
Identity = 198/237 (83.54%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MELRKYK-----PAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60
           ME RKY+     PAFL LLLFL +SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQ+WT 
Sbjct: 55  MEQRKYRADLLSPAFLVLLLFLFLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 114

Query: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120
           GK F LGDFLIFNTDNNHS+V TYN TTYKLCDYDDAS+HDTTEWSAADPSATTPY VTV
Sbjct: 115 GKNFSLGDFLIFNTDNNHSIVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 174

Query: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSG+YDGEQCQNGQQF INVTHGQGLPKSMRD S+EAPAPVVPDTGDQ
Sbjct: 175 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 234

Query: 181 TESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 232
           TESAPDTI+PS+FDNP+NDVAD  +DKE SGS SLSL   FKFNEF F+LVGIASAC
Sbjct: 235 TESAPDTIVPSNFDNPQNDVAD--SDKEVSGSVSLSL--HFKFNEFFFVLVGIASAC 287

[Close]

BLAST of CsaV3_6G038780.1 vs. NCBI nr
Match: XP_022943355.1 (blue copper protein-like [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 198/237 (83.54%), Postives = 210/237 (88.61%), Query Frame = 0


Query: 1   MELRKYK-----PAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60
           ME RKY+     PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQ+WT 
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDDAS+HDTTEWSAADPSATTPY VTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSG+YDGEQCQNGQQF INVTHGQGLPKSMRD S+EAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 232
           TESAPDTI+PS+FDNP NDVAD  +DKE SGS SLSL    KFNEF F+L GIASAC
Sbjct: 181 TESAPDTIVPSNFDNPVNDVAD--SDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 233

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BLAST of CsaV3_6G038780.1 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 46/145 (31.72%), Postives = 65/145 (44.83%), Query Frame = 0


Query: 30  HTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFN-TDNNHSVVQTYNVTTYKLCDY 89
           H VGD+ GW   +      Y +W AGKTF +GD L FN   N H+V +     ++  C++
Sbjct: 5   HIVGDNTGW--SVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNF 64

Query: 90  DDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTH 149
            ++ +         D   T+P    V   L + G +YF      G  C NGQ+ +INV  
Sbjct: 65  VNSDN---------DVERTSP----VIERLDELGMHYFVC--TVGTHCSNGQKLSINVVA 124

Query: 150 GQGL----PKSMRDPSEEAPAPVVP 170
                   P S   PS   P PV+P
Sbjct: 125 ANATVSMPPPSSSPPSSVMPPPVMP 132

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BLAST of CsaV3_6G038780.1 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04
Identity = 30/90 (33.33%), Postives = 43/90 (47.78%), Query Frame = 0


Query: 11  LLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDN 70
           ++L FL  +    V A K +TVG++  W      P ++Y  W  GK F LGD+L F  D 
Sbjct: 11  VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 71  NHSVVQTYNVTTYKLCDYDDASDHDTTEWS 101
           N   +   N T Y+ C     +DH    W+
Sbjct: 71  NQHNILEVNKTDYEGC----IADHPIRNWT 90

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BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL
Match: A0A0A0KJZ8 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G429060 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL 60
           MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL
Sbjct: 1   MELRKYKPAFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGL 60

Query: 61  GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK 120
           GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK
Sbjct: 61  GDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVK 120

Query: 121 EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD 180
           EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD
Sbjct: 121 EGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPD 180

Query: 181 TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY 237
           TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY
Sbjct: 181 TIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFLSLY 236

[Close]

BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL
Match: A0A5A7V0S1 (Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001280 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.7e-118
Identity = 215/243 (88.48%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MELRKYKP-------AFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWT 60
           MELRKYKP         LLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQ+WT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVT 120
           AGKTFGLGDFLIFNTDNNHSVVQTYN TTYKLCDYDDA ++DTTEWSAADPSATTPY V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDAPENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGD 180
           VAVPLVKEGPNYFFSGNYDGEQCQNGQQF INVTHGQGLPKSM DPS+EAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFL 237
           QTE+APDTI+PSSFDNPRNDVAD  NDKESS SNS+SL+YCFKFNEF FLL+GIASACFL
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVAD--NDKESSSSNSISLVYCFKFNEFFFLLIGIASACFL 240

[Close]

BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL
Match: A0A5D3B9X2 (Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00520 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.9e-118
Identity = 215/243 (88.48%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MELRKYKP-------AFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWT 60
           MELRKYKP         LLLL LSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQ+WT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLLLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVT 120
           AGKTFGLGDFLIFNTDNNHSVVQTYN TTYKLCDYDDAS++DTTEWSAADPSATTPY V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGD 180
           VAVPLVKEGPNYFFSGNYDGEQCQNGQQF INVTHGQGLPKSM DPS+EAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFL 237
           QTE+APDTI+PSSFDNPRNDVAD  NDKESS SNS+SL+YCFKFNEF FLL+GIASACFL
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVAD--NDKESSSSNSISLVYCFKFNEFFFLLIGIASACFL 240

[Close]

BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL
Match: A0A1S3BN35 (cucumber peeling cupredoxin OS=Cucumis melo OX=3656 GN=LOC103491450 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.9e-118
Identity = 215/243 (88.48%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MELRKYKP-------AFLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWT 60
           MELRKYKP         LLLL LSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQ+WT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLLLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVT 120
           AGKTFGLGDFLIFNTDNNHSVVQTYN TTYKLCDYDDAS++DTTEWSAADPSATTPY V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGD 180
           VAVPLVKEGPNYFFSGNYDGEQCQNGQQF INVTHGQGLPKSM DPS+EAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASACFL 237
           QTE+APDTI+PSSFDNPRNDVAD  NDKESS SNS+SL+YCFKFNEF FLL+GIASACFL
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVAD--NDKESSSSNSISLVYCFKFNEFFFLLIGIASACFL 240

[Close]

BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL
Match: A0A6J1FXQ3 (blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448143 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.6e-103
Identity = 198/237 (83.54%), Postives = 210/237 (88.61%), Query Frame = 0


Query: 1   MELRKYK-----PAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60
           ME RKY+     PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQ+WT 
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDDAS+HDTTEWSAADPSATTPY VTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSG+YDGEQCQNGQQF INVTHGQGLPKSMRD S+EAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIIPSSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 232
           TESAPDTI+PS+FDNP NDVAD  +DKE SGS SLSL    KFNEF F+L GIASAC
Sbjct: 181 TESAPDTIVPSNFDNPVNDVAD--SDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 233

[Close]

BLAST of CsaV3_6G038780.1 vs. TAIR 10
Match: AT1G08500.1 (early nodulin-like protein 18 )

HSP 1 Score: 238.8 bits (608), Expect = 4.4e-63
Identity = 121/212 (57.08%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 11  LLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDN 70
           LL++ L +   SA  AYKN+TVG+S GWFD  E+P+ +YQ+W   K+F LGDFLIFNTD+
Sbjct: 12  LLIMCLMLLSLSA-DAYKNYTVGESTGWFDIQERPSANYQKWADSKSFSLGDFLIFNTDS 71

Query: 71  NHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGN 130
           NHSVVQTY+  TYK CDYD+  ++DTTEWSAA+PSAT+P PV+++VPLVKEG NYFFSGN
Sbjct: 72  NHSVVQTYDFKTYKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSGN 131

Query: 131 YDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQTESAPDTIIPSSFDNP 190
           YDGEQC+ GQ F INVTHGQGLP S       AP P         E APDTI+P++FD+P
Sbjct: 132 YDGEQCKFGQHFMINVTHGQGLPDSSSPDDAAAPGPSESSQSGDDEVAPDTIVPANFDHP 191

Query: 191 RNDVADNNNDKE-----SSGSNSLSLIYCFKF 218
           + D+   ++DKE     SS S + + ++CF F
Sbjct: 192 K-DIESADDDKEVHSKKSSSSTTKTSLFCFVF 221

[Close]

BLAST of CsaV3_6G038780.1 vs. TAIR 10
Match: AT3G27200.1 (Cupredoxin superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-08
Identity = 43/157 (27.39%), Postives = 68/157 (43.31%), Query Frame = 0


Query: 5   KYKPAFLLLLFLS-ISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDF 64
           K +   ++L+F   +S ++A+ A   H +G S GW     + +VD+  W++ ++F +GD 
Sbjct: 2   KMQAVLVILVFSGLLSVKTALAA--RHVIGGSQGW-----EQSVDFDSWSSDQSFKVGDQ 61

Query: 65  LIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGP 124
           ++F     HSVV+  + T YK CD                 S  +       V L K G 
Sbjct: 62  IVFKYSELHSVVELGSETAYKSCD--------------LGTSVNSLSSGNDVVKLSKTGT 121

Query: 125 NYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPS 161
            YF  G      C+ G +  +NV       KS   PS
Sbjct: 122 RYFACGTVG--HCEQGMKIKVNVVSSDS--KSASSPS 133

[Close]

BLAST of CsaV3_6G038780.1 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-07
Identity = 38/117 (32.48%), Postives = 54/117 (46.15%), Query Frame = 0


Query: 30  HTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYD 89
           H VGDS GW     +   +Y  WT G+ F +GD L+FN  ++   V   N T Y  C  D
Sbjct: 9   HIVGDSNGW-----ELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLD 68

Query: 90  DASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINV 147
           +     TT ++  + S          + L + G  +F  G  D   C NGQ+ +INV
Sbjct: 69  NY----TTLFTKGNDS----------IILSEVGKLWFICGVDD--HCVNGQKLSINV 104

[Close]

BLAST of CsaV3_6G038780.1 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05
Identity = 30/90 (33.33%), Postives = 43/90 (47.78%), Query Frame = 0


Query: 11  LLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDN 70
           ++L FL  +    V A K +TVG++  W      P ++Y  W  GK F LGD+L F  D 
Sbjct: 11  VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 71  NHSVVQTYNVTTYKLCDYDDASDHDTTEWS 101
           N   +   N T Y+ C     +DH    W+
Sbjct: 71  NQHNILEVNKTDYEGC----IADHPIRNWT 90

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140182.1	2.5e-132	100.00	cucumber peeling cupredoxin-like [Cucumis sativus] >KGN48076.1 hypothetical prot...	[more]
KAA0061753.1	7.7e-118	88.48	cucumber peeling cupredoxin [Cucumis melo var. makuwa]	[more]
XP_008449619.1	1.0e-117	88.48	PREDICTED: cucumber peeling cupredoxin [Cucumis melo] >TYJ96093.1 cucumber peeli...	[more]
XP_023512118.1	4.9e-104	83.54	uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo]	[more]
XP_022943355.1	5.4e-103	83.54	blue copper protein-like [Cucurbita moschata]	[more]

BLAST of CsaV3_6G038780.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	2.0e-07	31.72	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
Q39131	2.7e-04	33.33	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]

BLAST of CsaV3_6G038780.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJZ8	1.2e-132	100.00	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G429060...	[more]
A0A5A7V0S1	3.7e-118	88.48	Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3B9X2	4.9e-118	88.48	Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BN35	4.9e-118	88.48	cucumber peeling cupredoxin OS=Cucumis melo OX=3656 GN=LOC103491450 PE=4 SV=1	[more]
A0A6J1FXQ3	2.6e-103	83.54	blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448143 PE=4 SV=1	[more]

BLAST of CsaV3_6G038780.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08500.1	4.4e-63	57.08	early nodulin-like protein 18	[more]
AT3G27200.1	7.0e-08	27.39	Cupredoxin superfamily protein	[more]
AT3G17675.1	7.7e-07	32.48	Cupredoxin superfamily protein	[more]
AT5G15350.1	1.9e-05	33.33	early nodulin-like protein 17	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 38..140 e-value: 1.5E-20 score: 73.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 28..148 score: 27.148773
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 26..149 e-value: 3.6E-25 score: 90.3
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 28..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..206
None	No IPR available	PANTHER	PTHR33021:SF328	BNAA08G26900D PROTEIN	coord: 12..174
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 28..146 e-value: 3.07317E-27 score: 98.4863
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 12..174

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G038780	CsaV3_6G038780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038780.1.exon1	CsaV3_6G038780.1.exon1	exon
CsaV3_6G038780.1.exon2	CsaV3_6G038780.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038780.1.cds1	CsaV3_6G038780.1.cds1	CDS
CsaV3_6G038780.1.cds2	CsaV3_6G038780.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038780.1	CsaV3_6G038780.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0009055	electron transfer activity