CsaV3_6G038700.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTATTATTATTATTATTGTTTTATTCTACTTTTTAATTGAAAAGTTATTTTAAGCACAATACCATTTAAAAAGATTTATAACTAAAACAAAATATCATAAACTATTATAAATATCATAATCTATTAGATTACGATCATAATCTATTATAACTTTTCTAAAAAAAATTAGGTAAGATATTTTAAAAATAATAAAATATTAAACTATTTACAAATTAGATTACGATCATAATCTATTAAATTTTTGTATTAAGGTCTCAAATTACTGTTTAGTTTCAAGGTGTGATTCCATCTTCAAGTTTCCGTCCAATCAAAGTTGTGTTCGTTTGAAAAGTCTCAAAGGAGGAAGCTTCAACTCGAACCATCCATGGATTCTAATCGAACTCAAAGTGAATTAAACGGAAGAAGATTAAACCAAAACGCACCTGTTTTGACACCTCTTCAATTAAGTATCGCAAGAGTAATTTCTCGATCACTGTTCTTCGGTGTGATTCTCATCTTGATTCCTCAAATCACTCCAGTATTCAACGACCAAGGAAAATTCATCACATTCGACTCCAAATACCCTGACTCCATAACCAAACAAGAATTCCATGACTTAATCGACGAGCTGAAAACCGCCGAAATTCTCACAGAGGATAAAGAAAGCCTTGTGTTCATTCCAGAATCTTCGTATTTAAACACCGATGATGCTCCGAATGATTATGCAGATTATTTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACAGTTTTTTGCCAGGGGGATTATTTGAGAATGAATTCGATATCGTGTTCACGGTAGGGCAGATCGGAGCCCGATTTGTTGACCGTGTTCTTAGAAGCGGCGGGGCGGTGGTTCTTCCGGCGACGGATATTTCTGTAAATGTGTATCTTGATGAGTTGAAATATAGGTGCGTTTATTTAAAGGCTTATAGAGTTGAAAGGATCATCATGGTGGTGATGAAACCTAGAGCGTCGGAACAATCAGACGCCGGTGAGAAACGCGGTCATCGCCGCCGCCCAAATTGGGTGTACCATAAACAATGATTTGTCTGATACGGATATGTAAGCTTTGGGTGGAGACTTCTCTTTTTCCCACCCTTTTCGAGAAGCTGTGGGAGGCAATTAGGTTAGAGAGGGATTTACTTTTTCTTTGCTTTTTCTATTCTATTGTTTTATTTTTTTAAAAATACCTCATGAAAGGCATCTAGGAGGGGTAAAAAATCAACAAAAGAATCGAAATATTGGTGTCAAAATTTTAATTTTACGGATATGTTGAGTTATGAAATTTATAAATTTTATTTAGATTTATGTTTTATTACTCTGAAACTAAATTATAGATATTGATATTAGTAGTCATAAACTCGTAATAAACTAAGTAGACCACATTTTAGTGGAGCATTATCATGGATGGAAGAAAAAATAATTTTGTAAATAGTTTTAAATTTTTTTCTCTCTTTCAAATACTTACCTCAAGGAGTGTTAGAGAAAGCCTGGATATTAAATATAAATATAAAAACGAAAGATAATTTTAGGGGTTTGTCAAAAATATAACCAAACCACAAAATATATTTATACAGTTGTGAAAACAAAAAAAACCAAGAACATCTAATATATTTGGTAGAAAATTGAGTTTAGATTTGACTACCAAAATACTTTTTTTTCAAAATCTTTTATATTTGTTAGATTTGGTTGTAGCATGTACCAATATCCAACTATTTTTTTTGTTAAGAAACGTGTAGAAAAAAAAGTAAAGGAAAGGGGCTTTTGCAAAAAAAAAAAAAATGATAATAGAACCTATGTTACATATTTTTTAAATTTTCAAAAGTAGCAAATTTGAAAGTAATTTGCAAATTTAAAGGTGATGATCCTCTAGTAGTCATACGATTACC ATGGATTCTAATCGAACTCAAAGTGAATTAAACGGAAGAAGATTAAACCAAAACGCACCTGTTTTGACACCTCTTCAATTAAGTATCGCAAGAGTAATTTCTCGATCACTGTTCTTCGGTGTGATTCTCATCTTGATTCCTCAAATCACTCCAGTATTCAACGACCAAGGAAAATTCATCACATTCGACTCCAAATACCCTGACTCCATAACCAAACAAGAATTCCATGACTTAATCGACGAGCTGAAAACCGCCGAAATTCTCACAGAGGATAAAGAAAGCCTTGTGTTCATTCCAGAATCTTCGTATTTAAACACCGATGATGCTCCGAATGATTATGCAGATTATTTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACAGTTTTTTGCCAGGGGGATTATTTGAGAATGAATTCGATATCGTGTTCACGGTAGGGCAGATCGGAGCCCGATTTGTTGACCGTGTTCTTAGAAGCGGCGGGGCGGTGGTTCTTCCGGCGACGGATATTTCTGTAAATGTGTATCTTGATGAGTTGAAATATAGGTGCGTTTATTTAAAGGCTTATAGAGTTGAAAGGATCATCATGGTGGTGATGAAACCTAGAGCGTCGGAACAATCAGACGCCGGTGAGAAACGCGGTCATCGCCGCCGCCCAAATTGGGTGTACCATAAACAATGA ATGGATTCTAATCGAACTCAAAGTGAATTAAACGGAAGAAGATTAAACCAAAACGCACCTGTTTTGACACCTCTTCAATTAAGTATCGCAAGAGTAATTTCTCGATCACTGTTCTTCGGTGTGATTCTCATCTTGATTCCTCAAATCACTCCAGTATTCAACGACCAAGGAAAATTCATCACATTCGACTCCAAATACCCTGACTCCATAACCAAACAAGAATTCCATGACTTAATCGACGAGCTGAAAACCGCCGAAATTCTCACAGAGGATAAAGAAAGCCTTGTGTTCATTCCAGAATCTTCGTATTTAAACACCGATGATGCTCCGAATGATTATGCAGATTATTTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACAGTTTTTTGCCAGGGGGATTATTTGAGAATGAATTCGATATCGTGTTCACGGTAGGGCAGATCGGAGCCCGATTTGTTGACCGTGTTCTTAGAAGCGGCGGGGCGGTGGTTCTTCCGGCGACGGATATTTCTGTAAATGTGTATCTTGATGAGTTGAAATATAGGTGCGTTTATTTAAAGGCTTATAGAGTTGAAAGGATCATCATGGTGGTGATGAAACCTAGAGCGTCGGAACAATCAGACGCCGGTGAGAAACGCGGTCATCGCCGCCGCCCAAATTGGGTGTACCATAAACAATGA MDSNRTQSELNGRRLNQNAPVLTPLQLSIARVISRSLFFGVILILIPQITPVFNDQGKFITFDSKYPDSITKQEFHDLIDELKTAEILTEDKESLVFIPESSYLNTDDAPNDYADYLRRMGADVVIENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISVNVYLDELKYRCVYLKAYRVERIIMVVMKPRASEQSDAGEKRGHRRRPNWVYHKQ* Homology
BLAST of CsaV3_6G038700.1 vs. NCBI nr
Match: KGN48066.1 (hypothetical protein Csa_003441 [Cucumis sativus]) HSP 1 Score: 447.6 bits (1150), Expect = 6.5e-122 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. NCBI nr
Match: KAG6570453.1 (Protein DGS1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156.0 bits (393), Expect = 3.9e-34 Identity = 90/178 (50.56%), Postives = 113/178 (63.48%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. NCBI nr
Match: KAG6570441.1 (hypothetical protein SDJN03_29356, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.0 bits (354), Expect = 1.3e-29 Identity = 79/158 (50.00%), Postives = 101/158 (63.92%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. NCBI nr
Match: XP_028771672.1 (uncharacterized protein LOC114728882 [Prosopis alba]) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-07 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. NCBI nr
Match: XP_028785428.1 (uncharacterized protein LOC114741345 [Prosopis alba]) HSP 1 Score: 67.0 bits (162), Expect = 2.4e-07 Identity = 54/193 (27.98%), Postives = 92/193 (47.67%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. ExPASy TrEMBL
Match: A0A0A0KJZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G427990 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.1e-122 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. ExPASy TrEMBL
Match: A0A6P9ECA9 (uncharacterized protein LOC109010420 OS=Juglans regia OX=51240 GN=LOC109010420 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07 Identity = 52/210 (24.76%), Postives = 101/210 (48.10%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. ExPASy TrEMBL
Match: A0A6J5W009 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS1870 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07 Identity = 52/200 (26.00%), Postives = 96/200 (48.00%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. ExPASy TrEMBL
Match: A0A5E4FQ80 (PREDICTED: unnamed product OS=Prunus dulcis OX=3755 GN=ALMOND_2B012374 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.4e-07 Identity = 51/200 (25.50%), Postives = 97/200 (48.50%), Query Frame = 0
BLAST of CsaV3_6G038700.1 vs. ExPASy TrEMBL
Match: A0A5E4FQJ7 (PREDICTED: unnamed product OS=Prunus dulcis OX=3755 GN=ALMOND_2B012374 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.4e-07 Identity = 51/200 (25.50%), Postives = 97/200 (48.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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