CsaV3_6G038350.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038350.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	WHy domain-containing protein
Location	chr6: 21847648 .. 21850501 (+)
Sequence length	846
RNA-Seq Expression	CsaV3_6G038350.1
Synteny	CsaV3_6G038350.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCGCCAACGCAACTGGGTTTGGTGCGCCTTTCAGAGGTCCTACTTAGATATTCTTGAAAAGTTGCCTCCTTCCCCCATGGATTTTTGTTCTTACTCACTTATTTTCTTTTGGTTTTTTTTATAAACTTTGTATTTTGTATATAAAAATACACACACTTTTGATAATAATTAGTCTAGAGATTTTTTAAAAATATAAATAATTGACAAAATATCTATAGTGTATAAAAAAAACCCACAAATCCACAGAAAAAAATACAAAAATAATGTTTCTAAAACAATTGGTAAAATTTGAATAGCTAAGTATCGACTTTTGGAACAGATTTAATAGTTTATATTTGTTATATCTTCTATTCCTAAACTCTCGTTCATTCCAATTATTATTATTAGTCAGGTTGTTCTTGTCATTCTTTTTTAATCAAACTTTGATTAAGAAAATGCTCACTTTCAAAGACCTCAATTTTAAGATTTGTTAGGATATCAATTGTTAAAATGATACATATGCTCCTTTTATTCTAATTCTAAATTATCAAAGGTTTCATAAAAATTGATTTTTTTTTTTTGACCTAATTTGATTCAATCATTCCATTTTTAAAATGTTATATTATACTTTGTTTAAATGTTTTTTTTTTTCCTTTGGAGCAAAAAAACTGCTATTTTGTCCATAAGATCTTACATGTACCATCATTTAAATATGCATATATATGAAATTATGTTGACCTCTCAATCCTTTTGAGCCAAGACAAAAAGTGGGGCATGGGCTAAGTCACCATCTTTGACTAAAAGGCAACGTTTTTTTAATTTATTTATTATCTAGGTTTTTCATACTTGACGTAAGAAAAAATTCAAACATCTAACTTTCTAGTTGAAAAATATATATCCTATTTCTAATCATTTGATTTGTGTTGAGGTAAGTAAGTATACACCGATTGGTTAATAGGGAATGACAAACAATCTCTATATCCCATCCCAATCTCGTTCATGTTTTTCAATTTTGTGGAATTTCTCTGAGGAATTGTTCCTCGCAGGGAGGAATTGTTCCTTGCATGGAGTTGTTCCTGGCAAGTACCAAATACACAAATAACAAAAGTGTTTACGAGTATGGGTGAATGCATTTGCATATTGTCAATTAGTGAAACTTCAAAATAACAGATGTGTCCTTTTTAATGCAGTTACAATATTTAGTATATATAGTTCGTTGCAAGATATTCTTTCAATGATTTCAAAGGTAAAAGTAAAACTATAAAAATTATCGTCGAATTAACTCATATTACACCATTATAAAAATAATTGATGTAGCATTATCTTTCTCAATCGCCACGGTCGCATACAACCCATCGAAGTTGTAATTTATTTGTTTTAGCTCCAACAAATTTGTGTATTTTTCAATTGTTCATTTAATTTGATGTCTCCAATTTGTATACAGTGTAGTTACAAAAAAATTGAAATAACCGACGATGTTGGTTAGCTTCAGCCTTATCATTTAGATGCATAACGTAGAGCTAATAACATATATATAGTATGACGATATTGTCCTCTAAGTTCCAACGTTAAAATTTTCTTCTATTATGTTTGAGATAATAATTTTAACGTCTTTATTAACTATATTTGGATTTGATTGACAGTTTTTAAGATGATTAAAACCTTATAGTTGGTCATCATTGATTTCACATGTTAAAGTAGTAAAAACTGTTGAGTTGTAGTAGTTCAAGTTAAAGCCTCTGTCCAATCAATGTGGATGGCCACATCAATAATACATACACTAAATCAACAAGAAAATGAGTTATTCTTGTTGGTAGTAGGCAAATTTTTTAAAGCTTATGGGTGGCCTCAAGCTCCAAACTAAGATTGGTCTAAAAAAGCTTGCATAACTTCAAGTTTTAAACAAACCAAACAAAACTCAAAACACTCTACAATATGAAGAGTCACAAATGACTCGTACATCGTCAGAGTTGTTGCCCTGTGGCCCCAGCAAAAGTGAAAGTTAATGCAGCCTTTAAAATGTTAATTTAGTCGGTAACCGACTAACCGTCGTCCTTCCAAACAGTGGCTTCAGTCGGGCACGTGAGATTTGTGGTCGCAATCCGTCAATTCCATTCCCAATCTCAAAATATTTCCAATTCTTACCCTCCTCCGACCACGGTCTCTTCGGTCCGTTTCGGCCTATTTTCGTCATTTACTATGGCATCCCACTCTGTCACTACACCTCATCTTTCCATTTCCTTCATTCTCTCTCTAACTTTACTTTCTCAAAATCTCACCCATCTCTCCTTCCTCCTTCCGCCGGCGAAGAAGAAGATGGGGAAAAAACGTAACTGGAGCTGGACCTCCGCTCTTGTCGGAGCGGCGTCGGCAATTGCAGCCACGGCCATCATTTCCGCAAAGCCCAAGGACCCCACCTTTCACTTGATCTCAATTAAATTCACTTCCTTCAAGCTCAAGCCGCCGGTGGTGGACACCGAGCTTATCCTCACCGTCCACGTCACCAACCCCAACGTCGCTCCCATCCACTACTCCTCCACCGCTATGTCCATTTTCTACGAGGGTTCCCTCCTCGGGTCGGCCCAGGTGGATGCCGGTTCGCAGCAGCCCCGGTCGTGTCAGGTTCTACGACTTCCAGCCCGGCTGGACGGCCTGAAACTGGCCCACCACGGCAGCCGGTTCATCTCCGACGTGGCGAAGCGAGAGATGGTTCTGGATGCGAGTGTGGACATTGGGGGTTTTGCGAGAGTGCTGTGGTGGAGTCACAAATTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTCCTTGATCAGGAAAACACTTCTCAACTTGAGCTCTTTCTTAATTAG

mRNA sequence

ATGGCTACCGCCAACGCAACTGGGTTTGGTGCGCCTTTCAGAGTGGCTTCAGTCGGGCACGTGAGATTTGTGGTCGCAATCCGTCAATTCCATTCCCAATCTCAAAATATTTCCAATTCTTACCCTCCTCCGACCACGGTCTCTTCGGTCCGTTTCGGCCTATTTTCGTCATTTACTATGGCATCCCACTCTGTCACTACACCTCATCTTTCCATTTCCTTCATTCTCTCTCTAACTTTACTTTCTCAAAATCTCACCCATCTCTCCTTCCTCCTTCCGCCGGCGAAGAAGAAGATGGGGAAAAAACGTAACTGGAGCTGGACCTCCGCTCTTGTCGGAGCGGCGTCGGCAATTGCAGCCACGGCCATCATTTCCGCAAAGCCCAAGGACCCCACCTTTCACTTGATCTCAATTAAATTCACTTCCTTCAAGCTCAAGCCGCCGGTGGTGGACACCGAGCTTATCCTCACCGTCCACGTCACCAACCCCAACGTCGCTCCCATCCACTACTCCTCCACCGCTATGTCCATTTTCTACGAGGGTTCCCTCCTCGGGTCGGCCCAGGTGGATGCCGGTTCGCAGCAGCCCCGGTCGTGTCAGGTTCTACGACTTCCAGCCCGGCTGGACGGCCTGAAACTGGCCCACCACGGCAGCCGGTTCATCTCCGACGTGGCGAAGCGAGAGATGGTTCTGGATGCGAGTGTGGACATTGGGGGTTTTGCGAGAGTGCTGTGGTGGAGTCACAAATTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTCCTTGATCAGGAAAACACTTCTCAACTTGAGCTCTTTCTTAATTAG

Coding sequence (CDS)

ATGGCTACCGCCAACGCAACTGGGTTTGGTGCGCCTTTCAGAGTGGCTTCAGTCGGGCACGTGAGATTTGTGGTCGCAATCCGTCAATTCCATTCCCAATCTCAAAATATTTCCAATTCTTACCCTCCTCCGACCACGGTCTCTTCGGTCCGTTTCGGCCTATTTTCGTCATTTACTATGGCATCCCACTCTGTCACTACACCTCATCTTTCCATTTCCTTCATTCTCTCTCTAACTTTACTTTCTCAAAATCTCACCCATCTCTCCTTCCTCCTTCCGCCGGCGAAGAAGAAGATGGGGAAAAAACGTAACTGGAGCTGGACCTCCGCTCTTGTCGGAGCGGCGTCGGCAATTGCAGCCACGGCCATCATTTCCGCAAAGCCCAAGGACCCCACCTTTCACTTGATCTCAATTAAATTCACTTCCTTCAAGCTCAAGCCGCCGGTGGTGGACACCGAGCTTATCCTCACCGTCCACGTCACCAACCCCAACGTCGCTCCCATCCACTACTCCTCCACCGCTATGTCCATTTTCTACGAGGGTTCCCTCCTCGGGTCGGCCCAGGTGGATGCCGGTTCGCAGCAGCCCCGGTCGTGTCAGGTTCTACGACTTCCAGCCCGGCTGGACGGCCTGAAACTGGCCCACCACGGCAGCCGGTTCATCTCCGACGTGGCGAAGCGAGAGATGGTTCTGGATGCGAGTGTGGACATTGGGGGTTTTGCGAGAGTGCTGTGGTGGAGTCACAAATTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTCCTTGATCAGGAAAACACTTCTCAACTTGAGCTCTTTCTTAATTAG

Protein sequence

MATANATGFGAPFRVASVGHVRFVVAIRQFHSQSQNISNSYPPPTTVSSVRFGLFSSFTMASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN*

Homology

[Close]

BLAST of CsaV3_6G038350.1 vs. NCBI nr
Match: KAE8647360.1 (hypothetical protein Csa_003928 [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 3.3e-152
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MATANATGFGAPFRVASVGHVRFVVAIRQFHSQSQNISNSYPPPTTVSSVRFGLFSSFTM 60
           MATANATGFGAPFRVASVGHVRFVVAIRQFHSQSQNISNSYPPPTTVSSVRFGLFSSFTM
Sbjct: 1   MATANATGFGAPFRVASVGHVRFVVAIRQFHSQSQNISNSYPPPTTVSSVRFGLFSSFTM 60

Query: 61  ASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIAA 120
           ASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIAA
Sbjct: 61  ASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIAA 120

Query: 121 TAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYE 180
           TAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYE
Sbjct: 121 TAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYE 180

Query: 181 GSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGF 240
           GSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGF
Sbjct: 181 GSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGF 240

Query: 241 ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282
           ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 241 ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 281

[Close]

BLAST of CsaV3_6G038350.1 vs. NCBI nr
Match: XP_004140159.2 (uncharacterized protein LOC101218134 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 4.1e-118
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 60  MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA 119
           MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA
Sbjct: 1   MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA 60

Query: 120 ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY 179
           ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY
Sbjct: 61  ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY 120

Query: 180 EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG 239
           EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG
Sbjct: 121 EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG 180

Query: 240 FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282
           FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 181 FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 222

[Close]

BLAST of CsaV3_6G038350.1 vs. NCBI nr
Match: XP_008449575.2 (PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109
Identity = 213/230 (92.61%), Postives = 220/230 (95.65%), Query Frame = 0


Query: 53  GLFSSFTMASHSV-TTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSAL 112
           GLF SFT+ + S+ +T HLSIS ILSLTLLSQNLT  SFLLPPA KKMGKKRNWSW+SAL
Sbjct: 2   GLFLSFTILTLSLQSTAHLSISLILSLTLLSQNLTDPSFLLPPA-KKMGKKRNWSWSSAL 61

Query: 113 VGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYS 172
           VGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYS
Sbjct: 62  VGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELILTVHVTNPNVAPIHYS 121

Query: 173 STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL 232
           STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL
Sbjct: 122 STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL 181

Query: 233 DASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282
           DASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 182 DASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 230

[Close]

BLAST of CsaV3_6G038350.1 vs. NCBI nr
Match: KAA0061714.1 (late embryogenesis abundant hydroxyproline-rich glycoprotein [Cucumis melo var. makuwa] >TYJ96050.1 late embryogenesis abundant hydroxyproline-rich glycoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-95
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 99  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTV 158
           MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTV
Sbjct: 1   MGKKRNWSWSSALVGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELILTV 60

Query: 159 HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 218
           HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS
Sbjct: 61  HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 120

Query: 219 RFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 278
           RFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL
Sbjct: 121 RFISDVAKREMVLDASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 180

Query: 279 FLN 282
           FLN
Sbjct: 181 FLN 183

[Close]

BLAST of CsaV3_6G038350.1 vs. NCBI nr
Match: XP_038900652.1 (uncharacterized protein LOC120087813 [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-94
Identity = 176/182 (96.70%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 99  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTV 158
           MGKKRNWSW+SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELILTV
Sbjct: 1   MGKKRNWSWSSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELILTV 60

Query: 159 HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 218
           HVTNPNVAPIHYSSTAMSIFY+GSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS
Sbjct: 61  HVTNPNVAPIHYSSTAMSIFYDGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 120

Query: 219 RFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 278
           RFISDVAKREM+LDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL
Sbjct: 121 RFISDVAKREMILDASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 180

Query: 279 FL 281
           FL
Sbjct: 181 FL 182

[Close]

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL
Match: A0A0A0KGW5 (WHy domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425170 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 60  MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA 119
           MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA
Sbjct: 1   MASHSVTTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSALVGAASAIA 60

Query: 120 ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY 179
           ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY
Sbjct: 61  ATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFY 120

Query: 180 EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG 239
           EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG
Sbjct: 121 EGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGG 180

Query: 240 FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282
           FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 181 FARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 222

[Close]

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL
Match: A0A1S3BMZ9 (uncharacterized protein LOC103491417 OS=Cucumis melo OX=3656 GN=LOC103491417 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.9e-110
Identity = 213/230 (92.61%), Postives = 220/230 (95.65%), Query Frame = 0


Query: 53  GLFSSFTMASHSV-TTPHLSISFILSLTLLSQNLTHLSFLLPPAKKKMGKKRNWSWTSAL 112
           GLF SFT+ + S+ +T HLSIS ILSLTLLSQNLT  SFLLPPA KKMGKKRNWSW+SAL
Sbjct: 2   GLFLSFTILTLSLQSTAHLSISLILSLTLLSQNLTDPSFLLPPA-KKMGKKRNWSWSSAL 61

Query: 113 VGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYS 172
           VGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYS
Sbjct: 62  VGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELILTVHVTNPNVAPIHYS 121

Query: 173 STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL 232
           STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL
Sbjct: 122 STAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVL 181

Query: 233 DASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 282
           DASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN
Sbjct: 182 DASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLN 230

[Close]

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL
Match: A0A5D3B864 (Late embryogenesis abundant hydroxyproline-rich glycoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00090 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 6.2e-96
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 99  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTV 158
           MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTV
Sbjct: 1   MGKKRNWSWSSALVGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELILTV 60

Query: 159 HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 218
           HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS
Sbjct: 61  HVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGS 120

Query: 219 RFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 278
           RFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL
Sbjct: 121 RFISDVAKREMVLDASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLEL 180

Query: 279 FLN 282
           FLN
Sbjct: 181 FLN 183

[Close]

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL
Match: A0A6J1K4X2 (uncharacterized protein LOC111490777 OS=Cucurbita maxima OX=3661 GN=LOC111490777 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 7.4e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 99  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 158
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPV+D ELIL
Sbjct: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60

Query: 159 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 218
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120

Query: 219 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 278
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180

Query: 279 ELFLN 282
           ELFL+
Sbjct: 181 ELFLS 185

[Close]

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL
Match: A0A6J1H295 (uncharacterized protein LOC111459445 OS=Cucurbita moschata OX=3662 GN=LOC111459445 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 2.2e-88
Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 99  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 158
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELIL
Sbjct: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60

Query: 159 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 218
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSA VDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAHVDAGSQQARSCQVLRLPARLDGLKLAHN 120

Query: 219 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 278
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180

Query: 279 ELFLN 282
           ELFL+
Sbjct: 181 ELFLS 185

[Close]

BLAST of CsaV3_6G038350.1 vs. TAIR 10
Match: AT3G44380.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 255.4 bits (651), Expect = 5.4e-68
Identity = 123/180 (68.33%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 101 KKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHV 160
           +K  WSW+SAL+GAASA AA +++SAKPKDPTFHLISI  TS KL  PV+D EL+LTVHV
Sbjct: 6   QKVKWSWSSALIGAASATAAASLLSAKPKDPTFHLISIDLTSLKLNLPVLDAELMLTVHV 65

Query: 161 TNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRF 220
           TNPN+A IHYSST M+I Y+G++LGSA+V AGSQ  RSCQ+LRLPARLDG++LA H  +F
Sbjct: 66  TNPNIAAIHYSSTKMTILYDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQF 125

Query: 221 ISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFL 280
            SDVA REM L+A + I G A+VLWW H F+VHVDS +TVDPVFLDV+ QEN SQ++LFL
Sbjct: 126 FSDVANREMKLEAKLTIEGAAKVLWWDHSFRVHVDSFVTVDPVFLDVIGQENKSQMDLFL 185

[Close]

BLAST of CsaV3_6G038350.1 vs. TAIR 10
Match: AT1G52330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 38/139 (27.34%), Postives = 61/139 (43.88%), Query Frame = 0


Query: 128 PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLL 187
           P DP   +I +K +   +  +P P +D  L++T+ V+N +V    ++   ++I Y G  L
Sbjct: 64  PSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTL 123

Query: 188 GSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVL 247
           G    D G         L   A LDG+ +       I D+AK  +  D   +  G   VL
Sbjct: 124 GHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVL 183

Query: 248 WWSHKFKVHVDSHLTVDPV 264
           ++    K  V   + VD V
Sbjct: 184 FFRFPLKAKVACGILVDTV 202

[Close]

BLAST of CsaV3_6G038350.1 vs. TAIR 10
Match: AT1G52330.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 35/128 (27.34%), Postives = 57/128 (44.53%), Query Frame = 0


Query: 128 PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLL 187
           P DP   +I +K +   +  +P P +D  L++T+ V+N +V    ++   ++I Y G  L
Sbjct: 64  PSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTL 123

Query: 188 GSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVL 247
           G    D G         L   A LDG+ +       I D+AK  +  D   +  G   VL
Sbjct: 124 GHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVL 183

Query: 248 WWSHKFKV 253
           ++    KV
Sbjct: 184 FFRFPLKV 191

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647360.1	3.3e-152	100.00	hypothetical protein Csa_003928 [Cucumis sativus]	[more]
XP_004140159.2	4.1e-118	100.00	uncharacterized protein LOC101218134 [Cucumis sativus]	[more]
XP_008449575.2	2.1e-109	92.61	PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo]	[more]
KAA0061714.1	1.3e-95	97.81	late embryogenesis abundant hydroxyproline-rich glycoprotein [Cucumis melo var. ...	[more]
XP_038900652.1	2.4e-94	96.70	uncharacterized protein LOC120087813 [Benincasa hispida]	[more]

BLAST of CsaV3_6G038350.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G038350.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGW5	2.0e-118	100.00	WHy domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425170 PE=3 SV...	[more]
A0A1S3BMZ9	9.9e-110	92.61	uncharacterized protein LOC103491417 OS=Cucumis melo OX=3656 GN=LOC103491417 PE=...	[more]
A0A5D3B864	6.2e-96	97.81	Late embryogenesis abundant hydroxyproline-rich glycoprotein OS=Cucumis melo var...	[more]
A0A6J1K4X2	7.4e-89	91.89	uncharacterized protein LOC111490777 OS=Cucurbita maxima OX=3661 GN=LOC111490777...	[more]
A0A6J1H295	2.2e-88	91.89	uncharacterized protein LOC111459445 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]

BLAST of CsaV3_6G038350.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44380.1	5.4e-68	68.33	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G52330.1	1.1e-07	27.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G52330.2	1.2e-06	27.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013990	Water stress and hypersensitive response domain	SMART	SM00769	why	coord: 138..253 e-value: 7.0E-14 score: 62.1
None	No IPR available	GENE3D	2.60.40.1820		coord: 110..262 e-value: 1.1E-8 score: 37.0
None	No IPR available	PANTHER	PTHR31852:SF7	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 93..268
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 93..268
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 118..254
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 157..254 e-value: 6.3E-12 score: 45.9

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G038350	CsaV3_6G038350	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038350.1.exon1	CsaV3_6G038350.1.exon1	exon
CsaV3_6G038350.1.exon2	CsaV3_6G038350.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038350.1.cds1	CsaV3_6G038350.1.cds1	CDS
CsaV3_6G038350.1.cds2	CsaV3_6G038350.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G038350.1	CsaV3_6G038350.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009269	response to desiccation