Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG mRNA sequence ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG Coding sequence (CDS) ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG Protein sequence MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCVLHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL*
Homology
BLAST of CsaV3_6G022250.1 vs. NCBI nr
Match: KAE8647071.1 (hypothetical protein Csa_022949 [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 6.7e-50 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query: 1 MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV 60
MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV
Sbjct: 1 MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV 60
Query: 61 LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL 104
LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL
Sbjct: 61 LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL 103
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8647071.1 | 6.7e-50 | 100.00 | hypothetical protein Csa_022949 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_6G022250.1.exon1 | CsaV3_6G022250.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_6G022250.1.cds1 | CsaV3_6G022250.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_6G022250.1 | CsaV3_6G022250.1-protein | polypeptide |
|
