CsaV3_6G021730.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G021730.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr6: 14698995 .. 14701482 (-)
Sequence length	912
RNA-Seq Expression	CsaV3_6G021730.1
Synteny	CsaV3_6G021730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTTTCAAAATTTTCATCCGTTATCTTTCCCCTTTTTCCACAACATCTGGATTTGTACAAAGATCGGCGTTAATTCAACTCAAGCTCTTTCAATTCCTTGCAATTCATGGATCCTAAACTCACTCATATTCCAGGTATTGATCTTTTTCCCTATTTTCCTACATTCATTTCCATTGAATTTTTATGACTGATTTCTCTCAATTTTGCTTCAAATCCGCAGCAAAGCCTATTTCCTCTAAACCTAAATTCACCCGAAAGCCTTCCGAAGCACCCCAAATCACCGCCCATCAACCTCAAATTTCAAGGTACTACTACGCAGTATTATTCTCAATTTCATTTTGAATCATGTTCTTCTGTACTAGCGTCTGAATCTTGTTATTGCAATTAGGCAGAATCGCGTTTTTGGAACTGTTAGAAGCTCAAACATACCGGTTAAACCTGTAGTTAATGAAAAGCCATTAACTAATCCCGTTATTGGGGGTGTCAAGAAACAACCCAAATCCCGATTAGCTCAAATCTCGGTCAATGCTACTGTTGATCGGAAGATTAATGAGAAATTGAATCCGAGGCTAAAGAAGAAGAGCCCTGGTATCCAACAGCAAGTTACGGAAACGGCTGTTAAGGGTCTGCGTGATGGGAATGACGTTGTAGAGCCTCAGACGCCGGTTGCGAGGCCTCGGTTGTTGAAATTGAAGAACGGTGGCACGCCTTACCATACGGCGGAGAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACATCGTCGTATTGGGTTGCTCAGATCAAATTGGCTGAGTCAGTTGGGAAGCATTGGGTATCTGCTGATTTCTTTCGCCTTGCTTATGTTTGCAATGCTGAGGTAAAGTGATGAACATCTTAGCTTTTCCTCTCATCATATCTGGAAGTGCTTTTTATGATAATTAAAATTAGAAAAAATAGTTTGATTAGAACTACTTTACTACAAAGTGGTTTATTACATAGCTTTGAAGAACAAATAGTTTTCGTATTTCTAAGCATTTTCCCGAGTGGCAGGTCTAACAGCTAATTCCTTTCCCCAATCCATAACGCGAACTATAGAAAAGGGAGATTGTTATTGATGTGAAACGTTGAGTTGCCAATATGGGTTTGGATTTTCCGGGAGAAAGATCTATTTCATAAATCAGTTAATGGATTGGAGTCGGGGTGATCCCTGTGGTGATCCCTTTTATTTTTAACGGTAGAGGATGTTTAATTGGAATGCCTTAAATTTGTTATTTGGTGCTCCGAACGACTAATGGTCCGTTTGGATGGAATTAAGAAAAAATTGATTTTCGATAATACATTTTCTTTTAAACACTTTTTTAAATGAATTTAAAATCTAAACACTTAATGTTTGGTTAGACTTCTTTTATAAGTGTTTACATTGAATTTGTTTTTTAATTTACCAAACACTACCATTTTTTTCAAACTAGTTGTATTTGATTTATGTTATTTAAGATTTTACCTTAAAAGTTTCGAGTAAAAGTGCGTTGATAAACTCTCAATTCTATGAGTACCTTTGGTCTATAACTTGATATCTTCTATGTAATAATAAACTGCTCTCCTCTGTTTATGGACAAACTAATTGCATTGCCATTCAACTATGTATTTGCGTTGATTCTCTACCATTTACATTTTCTGTTATATTTTCATTTGTCGAATTCTTAACGTGTCTTTGTGAACTAATTGGAGAGATCATTTTGGGTTTGCTCATAATTCAGTTTTTACCTTCAGATTTATATTAATATGTGGTACATATTATCATAACAGCCGATCAGGAACCTCAAAGTCGAACTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAAGATGTGAGTCTTAGCTACGGCTTACTTCAAAACGACATCAATGGAGCCTCCCCTCACAATCCTTCCACTGAAACTTGTGGCAATGAAATCAACAAAGATCTTCAAACTGTGACACCAGAAATCAGTAGCAGTAAACTTGTTAAAGATGAGATTGTGGGAACCGATGTTGGCAAGGTGGGAACAGAGACAACCCAGAAATGGGTAAATTATTTGTCTATCGAACAACTGGGACACATCCATCAATGTTGACAGGTGAATTTGATTTTGTAGCCTTAGTTTATAGCCATTACTGTGTCTGTGTTGTATAAATGATATGTATTGTCTTTTGTGCTTGCCATTGCCTTTTTCACATTCTATTTCTTTGACTACGCTAATGACATAAACATTGGCTAATGTTATTCCCATTATATTTACAATATATGATACAGATCTGTATTCTGCCTCGCATGTTCAACTGTTTGTATTCTTTTTTGTTCAACCATTTTGAATCCAGTGTATGAACTTCTAAAGTGGTAGTTGGCAATGACGGATTTAGCATAGGTTTCGAAGGACTCGACCCCTCAATTTATGTATATATATATAATTGATATAATATTAAATTTAGAAGTTTGTTCAGTGC

mRNA sequence

ATGGATCCTAAACTCACTCATATTCCAGCAAAGCCTATTTCCTCTAAACCTAAATTCACCCGAAAGCCTTCCGAAGCACCCCAAATCACCGCCCATCAACCTCAAATTTCAAGGCAGAATCGCGTTTTTGGAACTGTTAGAAGCTCAAACATACCGGTTAAACCTGTAGTTAATGAAAAGCCATTAACTAATCCCGTTATTGGGGGTGTCAAGAAACAACCCAAATCCCGATTAGCTCAAATCTCGGTCAATGCTACTGTTGATCGGAAGATTAATGAGAAATTGAATCCGAGGCTAAAGAAGAAGAGCCCTGGTATCCAACAGCAAGTTACGGAAACGGCTGTTAAGGGTCTGCGTGATGGGAATGACGTTGTAGAGCCTCAGACGCCGGTTGCGAGGCCTCGGTTGTTGAAATTGAAGAACGGTGGCACGCCTTACCATACGGCGGAGAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACATCGTCGTATTGGGTTGCTCAGATCAAATTGGCTGAGTCAGTTGGGAAGCATTGGGTATCTGCTGATTTCTTTCGCCTTGCTTATGTTTGCAATGCTGAGCCGATCAGGAACCTCAAAGTCGAACTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAAGATGTGAGTCTTAGCTACGGCTTACTTCAAAACGACATCAATGGAGCCTCCCCTCACAATCCTTCCACTGAAACTTGTGGCAATGAAATCAACAAAGATCTTCAAACTGTGACACCAGAAATCAGTAGCAGTAAACTTGTTAAAGATGAGATTGTGGGAACCGATGTTGGCAAGGTGGGAACAGAGACAACCCAGAAATGGGTAAATTATTTGTCTATCGAACAACTGGGACACATCCATCAATGTTGA

Coding sequence (CDS)

ATGGATCCTAAACTCACTCATATTCCAGCAAAGCCTATTTCCTCTAAACCTAAATTCACCCGAAAGCCTTCCGAAGCACCCCAAATCACCGCCCATCAACCTCAAATTTCAAGGCAGAATCGCGTTTTTGGAACTGTTAGAAGCTCAAACATACCGGTTAAACCTGTAGTTAATGAAAAGCCATTAACTAATCCCGTTATTGGGGGTGTCAAGAAACAACCCAAATCCCGATTAGCTCAAATCTCGGTCAATGCTACTGTTGATCGGAAGATTAATGAGAAATTGAATCCGAGGCTAAAGAAGAAGAGCCCTGGTATCCAACAGCAAGTTACGGAAACGGCTGTTAAGGGTCTGCGTGATGGGAATGACGTTGTAGAGCCTCAGACGCCGGTTGCGAGGCCTCGGTTGTTGAAATTGAAGAACGGTGGCACGCCTTACCATACGGCGGAGAAATGTAGTAACTGCCGTTTTGACAAGATGGAGACATCGTCGTATTGGGTTGCTCAGATCAAATTGGCTGAGTCAGTTGGGAAGCATTGGGTATCTGCTGATTTCTTTCGCCTTGCTTATGTTTGCAATGCTGAGCCGATCAGGAACCTCAAAGTCGAACTAAAGCGTTACTTGACTCGGCATGAACATCTATCTATGAACACTGAGTGGAAAGATGTGAGTCTTAGCTACGGCTTACTTCAAAACGACATCAATGGAGCCTCCCCTCACAATCCTTCCACTGAAACTTGTGGCAATGAAATCAACAAAGATCTTCAAACTGTGACACCAGAAATCAGTAGCAGTAAACTTGTTAAAGATGAGATTGTGGGAACCGATGTTGGCAAGGTGGGAACAGAGACAACCCAGAAATGGGTAAATTATTTGTCTATCGAACAACTGGGACACATCCATCAATGTTGA

Protein sequence

MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEKPLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPHNPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHIHQC*

Homology

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BLAST of CsaV3_6G021730.1 vs. NCBI nr
Match: XP_004149544.1 (uncharacterized protein LOC101212258 [Cucumis sativus] >KGN47313.1 hypothetical protein Csa_023024 [Cucumis sativus])

HSP 1 Score: 612.5 bits (1578), Expect = 2.0e-171
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60
           MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK
Sbjct: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60

Query: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120
           PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD
Sbjct: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120

Query: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180
           GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW
Sbjct: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180

Query: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240
           VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH
Sbjct: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240

Query: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300
           NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI
Sbjct: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300

Query: 301 HQC 304
           HQC
Sbjct: 301 HQC 303

[Close]

BLAST of CsaV3_6G021730.1 vs. NCBI nr
Match: XP_008463928.1 (PREDICTED: uncharacterized protein LOC103501937 [Cucumis melo] >KAA0035332.1 uncharacterized protein E6C27_scaffold228G001350 [Cucumis melo var. makuwa] >TYK14305.1 uncharacterized protein E5676_scaffold84G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 283/303 (93.40%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60
           MDPKLT IPAKPISSKPKFTRKPSEAPQITAHQPQISRQ RVFGTVRSSNIP+KPVVNEK
Sbjct: 1   MDPKLTQIPAKPISSKPKFTRKPSEAPQITAHQPQISRQKRVFGTVRSSNIPIKPVVNEK 60

Query: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120
           PLT PVIGGVKKQPK RL QISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVK LRD
Sbjct: 61  PLTKPVIGGVKKQPKPRLPQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKDLRD 120

Query: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180
           G+DVVEPQTPVARPR LKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH+
Sbjct: 121 GDDVVEPQTPVARPRFLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHF 180

Query: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240
           VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQND NGASPH
Sbjct: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDTNGASPH 240

Query: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300
           NP+TE  GNEINK LQTVTPEISSSKLVKDEIVGTDV ++GTETTQKWVN +SIEQLGHI
Sbjct: 241 NPATEISGNEINK-LQTVTPEISSSKLVKDEIVGTDVSEIGTETTQKWVNSMSIEQLGHI 300

Query: 301 HQC 304
           HQC
Sbjct: 301 HQC 302

[Close]

BLAST of CsaV3_6G021730.1 vs. NCBI nr
Match: XP_038900775.1 (uncharacterized protein LOC120087872 [Benincasa hispida])

HSP 1 Score: 506.5 bits (1303), Expect = 1.6e-139
Identity = 255/308 (82.79%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKP-SEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60
           MDPKLT IPAKP+ SKPK TRKP SEAPQITAHQP I RQ RVFGTVRSSNIP+KPVVNE
Sbjct: 1   MDPKLTQIPAKPVFSKPKVTRKPSSEAPQITAHQPSIPRQKRVFGTVRSSNIPIKPVVNE 60

Query: 61  KPLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLR 120
           KPLT P+IG VKKQPKSR AQISVNA  D+K+NEKLNPR  KKSP I+QQVTETA+K LR
Sbjct: 61  KPLTKPLIGAVKKQPKSRSAQISVNAVADQKVNEKLNPRPNKKSPSIKQQVTETALKDLR 120

Query: 121 DGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180
            GNDVVEPQTP+ARPRLLKLKN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH
Sbjct: 121 VGNDVVEPQTPMARPRLLKLKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH 180

Query: 181 WVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASP 240
           +VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYG +QND NGASP
Sbjct: 181 FVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGFIQNDSNGASP 240

Query: 241 HNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSI 300
            NPSTE CG+EINKD     +++ TP+ISSSKLVKDEIVGT+VG++GTET Q+W N LS+
Sbjct: 241 QNPSTEICGSEINKDHETGTIESGTPKISSSKLVKDEIVGTNVGELGTETNQRWPNSLSM 300

Query: 301 EQLGHIHQ 303
           EQ G IHQ
Sbjct: 301 EQPGQIHQ 308

[Close]

BLAST of CsaV3_6G021730.1 vs. NCBI nr
Match: XP_022944218.1 (uncharacterized protein LOC111448733 [Cucurbita moschata])

HSP 1 Score: 460.7 bits (1184), Expect = 9.9e-126
Identity = 239/302 (79.14%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KP VNE
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKP-VNE 60

Query: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120
           KPL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTET +K L
Sbjct: 61  KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETGLKDL 120

Query: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           R  NDVVEP TPV RPR LK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RVQNDVVEPHTPVMRPRFLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180

Query: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240
           H+VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGL+Q+D NG  
Sbjct: 181 HFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLIQDDDNG-G 240

Query: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 296
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300

[Close]

BLAST of CsaV3_6G021730.1 vs. NCBI nr
Match: XP_022985821.1 (uncharacterized protein LOC111483750 [Cucurbita maxima])

HSP 1 Score: 458.0 bits (1177), Expect = 6.4e-125
Identity = 237/302 (78.48%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KP VNE
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKP-VNE 60

Query: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120
            PL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTETA+K L
Sbjct: 61  NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDL 120

Query: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           R  NDVVEP TPV RPRLLK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180

Query: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240
           H+VSADFFRLAY+CNAEPIRNL+VELKRYLTRHEHLSMNTEWKDVS SYGL+Q+D NG  
Sbjct: 181 HFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG-G 240

Query: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 296
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300

[Close]

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL
Match: A0A0A0KCP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G292420 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 9.8e-172
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60
           MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK
Sbjct: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60

Query: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120
           PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD
Sbjct: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120

Query: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180
           GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW
Sbjct: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180

Query: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240
           VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH
Sbjct: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240

Query: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300
           NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI
Sbjct: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300

Query: 301 HQC 304
           HQC
Sbjct: 301 HQC 303

[Close]

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL
Match: A0A5A7SVQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00290 PE=4 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 8.1e-158
Identity = 283/303 (93.40%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60
           MDPKLT IPAKPISSKPKFTRKPSEAPQITAHQPQISRQ RVFGTVRSSNIP+KPVVNEK
Sbjct: 1   MDPKLTQIPAKPISSKPKFTRKPSEAPQITAHQPQISRQKRVFGTVRSSNIPIKPVVNEK 60

Query: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120
           PLT PVIGGVKKQPK RL QISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVK LRD
Sbjct: 61  PLTKPVIGGVKKQPKPRLPQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKDLRD 120

Query: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180
           G+DVVEPQTPVARPR LKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH+
Sbjct: 121 GDDVVEPQTPVARPRFLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHF 180

Query: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240
           VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQND NGASPH
Sbjct: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDTNGASPH 240

Query: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300
           NP+TE  GNEINK LQTVTPEISSSKLVKDEIVGTDV ++GTETTQKWVN +SIEQLGHI
Sbjct: 241 NPATEISGNEINK-LQTVTPEISSSKLVKDEIVGTDVSEIGTETTQKWVNSMSIEQLGHI 300

Query: 301 HQC 304
           HQC
Sbjct: 301 HQC 302

[Close]

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL
Match: A0A1S3CLV7 (uncharacterized protein LOC103501937 OS=Cucumis melo OX=3656 GN=LOC103501937 PE=4 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 8.1e-158
Identity = 283/303 (93.40%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPSEAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNEK 60
           MDPKLT IPAKPISSKPKFTRKPSEAPQITAHQPQISRQ RVFGTVRSSNIP+KPVVNEK
Sbjct: 1   MDPKLTQIPAKPISSKPKFTRKPSEAPQITAHQPQISRQKRVFGTVRSSNIPIKPVVNEK 60

Query: 61  PLTNPVIGGVKKQPKSRLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGLRD 120
           PLT PVIGGVKKQPK RL QISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVK LRD
Sbjct: 61  PLTKPVIGGVKKQPKPRLPQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKDLRD 120

Query: 121 GNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHW 180
           G+DVVEPQTPVARPR LKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKH+
Sbjct: 121 GDDVVEPQTPVARPRFLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGKHF 180

Query: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGASPH 240
           VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQND NGASPH
Sbjct: 181 VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDTNGASPH 240

Query: 241 NPSTETCGNEINKDLQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLSIEQLGHI 300
           NP+TE  GNEINK LQTVTPEISSSKLVKDEIVGTDV ++GTETTQKWVN +SIEQLGHI
Sbjct: 241 NPATEISGNEINK-LQTVTPEISSSKLVKDEIVGTDVSEIGTETTQKWVNSMSIEQLGHI 300

Query: 301 HQC 304
           HQC
Sbjct: 301 HQC 302

[Close]

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL
Match: A0A6J1FXU3 (uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC111448733 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.8e-126
Identity = 239/302 (79.14%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KP VNE
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKP-VNE 60

Query: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120
           KPL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTET +K L
Sbjct: 61  KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETGLKDL 120

Query: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           R  NDVVEP TPV RPR LK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RVQNDVVEPHTPVMRPRFLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180

Query: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240
           H+VSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGL+Q+D NG  
Sbjct: 181 HFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLIQDDDNG-G 240

Query: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 296
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300

[Close]

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL
Match: A0A6J1J9A3 (uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.1e-125
Identity = 237/302 (78.48%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MDPKLTHIPAKPISSKPKFTRKPS-EAPQITAHQPQISRQNRVFGTVRSSNIPVKPVVNE 60
           MDPKLT IPAK +SSKPKF RKPS EAP+ITA+QP ISRQ RVFGTVRSSNIP+KP VNE
Sbjct: 1   MDPKLTQIPAKSLSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKP-VNE 60

Query: 61  KPLTNPVIGGVKKQPKS-RLAQISVNATVDRKINEKLNPRLKKKSPGIQQQVTETAVKGL 120
            PL  P+IG +KKQPKS RL QI+VN T D+KINEKLNPR KKKSP I+QQVTETA+K L
Sbjct: 61  NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSPSIKQQVTETALKDL 120

Query: 121 RDGNDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESVGK 180
           R  NDVVEP TPV RPRLLK KN GTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES GK
Sbjct: 121 RVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESAGK 180

Query: 181 HWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDINGAS 240
           H+VSADFFRLAY+CNAEPIRNL+VELKRYLTRHEHLSMNTEWKDVS SYGL+Q+D NG  
Sbjct: 181 HFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG-G 240

Query: 241 PHNPSTETCGNEINKD-----LQTVTPEISSSKLVKDEIVGTDVGKVGTETTQKWVNYLS 296
           P NPSTE CG+EINKD     +++ TPEISSSKL KDEIVG DVG++GTET+Q+W N LS
Sbjct: 241 PKNPSTEICGSEINKDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNSLS 300

[Close]

BLAST of CsaV3_6G021730.1 vs. TAIR 10
Match: AT5G62550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-09
Identity = 37/131 (28.24%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 156 RFDKMETSSYWVAQIKLAESVGKHWVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLS 215
           + + + +S+YW+  IKLAESV KH +S  FF+LA     EP+  +K ELK Y  R+    
Sbjct: 138 KVEDLSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCEPLDKMKEELKLYARRNNMDG 197

Query: 216 MNTEWKDVSLSYGLLQ--NDINGASPHNPSTETCGNEINKD-----------LQTVTPEI 274
           +    K++S  Y + +  N +  +   +   E     +N D              +T EI
Sbjct: 198 LADAMKELSELYNISEESNQVQVSETSSVVAEETAMSLNNDNDVQSSFSTPGNSNITSEI 257

The following BLAST results are available for this feature:

BLAST of CsaV3_6G021730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149544.1	2.0e-171	100.00	uncharacterized protein LOC101212258 [Cucumis sativus] >KGN47313.1 hypothetical ...	[more]
XP_008463928.1	1.7e-157	93.40	PREDICTED: uncharacterized protein LOC103501937 [Cucumis melo] >KAA0035332.1 unc...	[more]
XP_038900775.1	1.6e-139	82.79	uncharacterized protein LOC120087872 [Benincasa hispida]	[more]
XP_022944218.1	9.9e-126	79.14	uncharacterized protein LOC111448733 [Cucurbita moschata]	[more]
XP_022985821.1	6.4e-125	78.48	uncharacterized protein LOC111483750 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G021730.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G021730.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCP5	9.8e-172	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G292420 PE=4 SV=1	[more]
A0A5A7SVQ9	8.1e-158	93.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CLV7	8.1e-158	93.40	uncharacterized protein LOC103501937 OS=Cucumis melo OX=3656 GN=LOC103501937 PE=...	[more]
A0A6J1FXU3	4.8e-126	79.14	uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A6J1J9A3	3.1e-125	78.48	uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750...	[more]

BLAST of CsaV3_6G021730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62550.1	3.6e-09	28.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR34468:SF3	MEDIATOR OF DNA DAMAGE CHECKPOINT PROTEIN 1-LIKE	coord: 1..291
None	No IPR available	PANTHER	PTHR34468	MICROTUBULE-ASSOCIATED FUTSCH-LIKE PROTEIN	coord: 1..291

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G021730	CsaV3_6G021730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G021730.1.exon4	CsaV3_6G021730.1.exon4	exon
CsaV3_6G021730.1.exon3	CsaV3_6G021730.1.exon3	exon
CsaV3_6G021730.1.exon2	CsaV3_6G021730.1.exon2	exon
CsaV3_6G021730.1.exon1	CsaV3_6G021730.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G021730.1.cds4	CsaV3_6G021730.1.cds4	CDS
CsaV3_6G021730.1.cds3	CsaV3_6G021730.1.cds3	CDS
CsaV3_6G021730.1.cds2	CsaV3_6G021730.1.cds2	CDS
CsaV3_6G021730.1.cds1	CsaV3_6G021730.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G021730.1	CsaV3_6G021730.1-protein	polypeptide