CsaV3_6G014420.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G014420.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Serine/arginine repetitive matrix protein 1-like
Location	chr6: 10464853 .. 10466242 (+)
Sequence length	687
RNA-Seq Expression	CsaV3_6G014420.1
Synteny	CsaV3_6G014420.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGTAAGGAATTTGTGAATCTGATTACTGAAAGAAAACATAAATGATATAATTTATCTACTTACCATGAACCAGAAATTTGAAATTTTAAACTTGCAAGATTTAAAAACTCTTTTGCTTCTTATCATTCAAGTTATAAAATTGTTTGGGTATAATAACTTTTGATTCTCTCCCCTCGTATTTATTAAAATGATAAACAAAAATAAAAAGGGGATTGGAGCGGGAAATTTTGTTGGCCATAACATTGACCGGCTCACCAAATTTATGACTAAAGAAACCTTTACCAGTCATTGACACTCTCGCCAAAACCAAACCCCCACCGAAACTCCGATCTATATCGTCCAAATTCCCATCATGTCAACGCTCCACCGGTCACCGCCGTCCAGCGCCTCTCCCGAAACCCTAACCCAATCCAACAACCAAATCGATCAACTTCATTTCAACGACGAAGATGAAATCAATCTCCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCCACTCTCGATTCTCAGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAATTCTCCCACTCCGTCATCGCCGATAAGCTCCACCGACTCAAACTCCTGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGACCTAGGCCGCAGCATCTGGGGAAAATCCCCCACACCTGTAACAAGAAAACCACAGGTAATTTCACCTTCAAGGTTACTTTCACGAAGAATCAAACAAAGATCAATCACTAGAAAAGAAGGGGTTGGGGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCGGCAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGAATGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTGAAGGAGCAACTTAGAACTACAGAAACTAATGAAGATGTGAATTAGAATTAATTTCTGATTTGTACAATAGATAGTTACAGACAGAGAGCATTTTGTTATTGTCAATGTTGTTGAGTTCTTCCTTGTATTTTCGATTATGAAGTAATGGCAGAACTTAGATTAGGAGCACTTGTATTGTATGATTGTATTGTTATTAAATCAGCATGGTCAAGATTTGCTGATCATTTAAGTTTGAGATTATTTTTGTTCTTTTTTTCAAGGCTCTAAACAAAACAGAAAACAGGTTCCTATTTAGAATTTCGACTCAAAGTAATGATGCACTTAATAAAAAAGTTTAGATTGGTGCTACTAATTTTTACTAATTCAACCAATAATTTTATTGGATAATTTTCA

mRNA sequence

ATGTCAACGCTCCACCGGTCACCGCCGTCCAGCGCCTCTCCCGAAACCCTAACCCAATCCAACAACCAAATCGATCAACTTCATTTCAACGACGAAGATGAAATCAATCTCCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCCACTCTCGATTCTCAGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAATTCTCCCACTCCGTCATCGCCGATAAGCTCCACCGACTCAAACTCCTGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGACCTAGGCCGCAGCATCTGGGGAAAATCCCCCACACCTGTAACAAGAAAACCACAGGTAATTTCACCTTCAAGGTTACTTTCACGAAGAATCAAACAAAGATCAATCACTAGAAAAGAAGGGGTTGGGGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCGGCAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGAATGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTGAAGGAGCAACTTAGAACTACAGAAACTAATGAAGATGTGAATTAG

Coding sequence (CDS)

ATGTCAACGCTCCACCGGTCACCGCCGTCCAGCGCCTCTCCCGAAACCCTAACCCAATCCAACAACCAAATCGATCAACTTCATTTCAACGACGAAGATGAAATCAATCTCCTGAATTCCTACCTCCAAATCTCCAGATCCGAAAACCCCACCAAGAATTCTCTCCCCACTCTCGATTCTCAGGCCTTCGACCGCCTTCAGACCGCCGTCGGCCCCAAATTCTCCCACTCCGTCATCGCCGATAAGCTCCACCGACTCAAACTCCTGTACCACAAATTCGCAAGAACAAAGTCCTTCATCAAAACTCCTCACCAACGTCAGATCCTCGACCTAGGCCGCAGCATCTGGGGAAAATCCCCCACACCTGTAACAAGAAAACCACAGGTAATTTCACCTTCAAGGTTACTTTCACGAAGAATCAAACAAAGATCAATCACTAGAAAAGAAGGGGTTGGGGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTGTGGCTGAATTTTCTCGGCAGTTTCCGGGGAATGGGGTGTGGAGAGATGGGCTGAGGAGAATGAATGAGAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATATTGAAGGGGCTGAGCTTAAGGCAAGAAGGGCTGCTTTATTGAAGGAGCAACTTAGAACTACAGAAACTAATGAAGATGTGAATTAG

Protein sequence

MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN*

Homology

[Close]

BLAST of CsaV3_6G014420.1 vs. NCBI nr
Match: KGN46890.1 (hypothetical protein Csa_020607 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 4.5e-123
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60
           MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS
Sbjct: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60

Query: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120
           QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP
Sbjct: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120

Query: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180
           TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG
Sbjct: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180

Query: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 229
           LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN
Sbjct: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of CsaV3_6G014420.1 vs. NCBI nr
Match: KAA0037301.1 (serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK24183.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 202/225 (89.78%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MSTLHRSPPSSASPE------TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNS 60
           MST HRS PS+ASPE      TLTQ NNQ DQLHF DEDEINLL SYLQISRSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  LPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120
           LPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGN 180
           IWGKSPTP+TRKPQVISPSR+LSRRIKQRS TRKEGVGVD+DLKNFPVLVAEFS+QFPGN
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN 180

Query: 181 GVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLR 220
           GVWR+GLRRM EKNLKDMNEKWVLLHIEGAELKARRAALLK+QL+
Sbjct: 181 GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of CsaV3_6G014420.1 vs. NCBI nr
Match: KAG6570827.1 (hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 6.2e-72
Identity = 150/222 (67.57%), Postives = 177/222 (79.73%), Query Frame = 0


Query: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60
           MST HR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDS
Sbjct: 1   MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDS 60

Query: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120
            A DR++TA+ PKF++S IADKLHRLKL YHK ARTKS IKTPH R+IL++GRSIWGK P
Sbjct: 61  PALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPP 120

Query: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180
           T  T KPQ I   R + RRIKQRS + K+G    VDL +FPVL++EFSR+FPGNGVW++G
Sbjct: 121 TSRT-KPQAI--LRAIPRRIKQRSGSSKKG----VDLNDFPVLLSEFSRRFPGNGVWKEG 180

Query: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTE 223
           LR M EK+L+DMNEKWVLLHIE AELKARRAALL++QLR  +
Sbjct: 181 LRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLAD 206

[Close]

BLAST of CsaV3_6G014420.1 vs. NCBI nr
Match: KAG6606028.1 (hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-67
Identity = 147/232 (63.36%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 1   MSTLHRSPPSS-------ASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKN 60
           MST  RSPPS+       A+PE LTQS     Q+HF DEDE++LLN YL+++ S    KN
Sbjct: 1   MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEVAGS----KN 60

Query: 61  SLPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGR 120
           S PTLDS A DR+ TA+G KF HS IADKLHRLK+ YHKFARTKSFIKTPH  +IL++GR
Sbjct: 61  SQPTLDSPALDRIATALGHKFRHSHIADKLHRLKIQYHKFARTKSFIKTPHHLRILEIGR 120

Query: 121 SIWGKSPTPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPG 180
           SIWGK   P T KPQVI      SRRI+ RS+ +K+G    VDLKNFPVLV+EFSRQFPG
Sbjct: 121 SIWGKPHIPRT-KPQVI------SRRIRGRSVAKKKG----VDLKNFPVLVSEFSRQFPG 180

Query: 181 NGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNE 226
           NGVWR+GL+ M E +LK MNEKWVLLHIE AELKARR AL++ Q+ TT+T +
Sbjct: 181 NGVWREGLKGMEEWSLKGMNEKWVLLHIEEAELKARRVALIQRQIGTTQTKD 217

[Close]

BLAST of CsaV3_6G014420.1 vs. NCBI nr
Match: KAE8637412.1 (hypothetical protein CSA_023389, partial [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-30
Identity = 70/84 (83.33%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 143 RSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLHIE 202
           R + +  GV VDVDLKNFPVL+AE SRQF GNGVWRDGLRRM EKNLKDMNEKWVLLHIE
Sbjct: 14  RIVDKGVGVDVDVDLKNFPVLLAESSRQFLGNGVWRDGLRRMEEKNLKDMNEKWVLLHIE 73

Query: 203 GAELKARRAALLKEQLRTTETNED 227
           GAELKAR+ ALLK+QLRTTETNED
Sbjct: 74  GAELKARKTALLKQQLRTTETNED 97

[Close]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL
Match: A0A0A0KAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.2e-123
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60
           MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS
Sbjct: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60

Query: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120
           QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP
Sbjct: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120

Query: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180
           TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG
Sbjct: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180

Query: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 229
           LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN
Sbjct: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTETNEDVN 228

[Close]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL
Match: A0A5A7T6T1 (Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00170 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.4e-107
Identity = 202/225 (89.78%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MSTLHRSPPSSASPE------TLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNS 60
           MST HRS PS+ASPE      TLTQ NNQ DQLHF DEDEINLL SYLQISRSENPTKNS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  LPTLDSQAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120
           LPTLDS AFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKSPTPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGN 180
           IWGKSPTP+TRKPQVISPSR+LSRRIKQRS TRKEGVGVD+DLKNFPVLVAEFS+QFPGN
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN 180

Query: 181 GVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLR 220
           GVWR+GLRRM EKNLKDMNEKWVLLHIEGAELKARRAALLK+QL+
Sbjct: 181 GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL
Match: A0A0A0LBY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593690 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.1e-33
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 151 VGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLHIEGAELKARR 210
           V VDVDLKNFPVL+AEFSRQFPGNGVWRDGLRRM EKNLKDMNEKWVLLHIEGAELKAR+
Sbjct: 24  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAELKARK 83

Query: 211 AALLKEQLRTTETNEDVN 229
            ALLK+QLRTTETNEDVN
Sbjct: 84  TALLKQQLRTTETNEDVN 101

[Close]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL
Match: A0A5J5C8J5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001981 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.2e-30
Identity = 89/214 (41.59%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 4   LHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDSQAF 63
           LH+SP +S   +T+T   +Q  +L F +EDEI LL ++L+ ++S   TK+S   L S   
Sbjct: 30  LHKSPVASPEKQTITNPKSQRHRL-FTEEDEIRLLKAFLRTTKS---TKSSTTPLSS--- 89

Query: 64  DRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPV 123
                 +G +FS S I DKL RL+  YHK ARTKSFIKTPH RQI ++   IWGK  T  
Sbjct: 90  -----LIGGQFSDSQITDKLRRLRQRYHKLARTKSFIKTPHDRQIYEIAGKIWGKKATNS 149

Query: 124 TRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRR 183
           +      SP R      +      + G   +V L+NFPVL  E  R FP N V+R+GL+ 
Sbjct: 150 S------SPDRNPGESTENPKNIEENGAYGEVGLENFPVLRREVDRIFPENAVYREGLKF 209

Query: 184 MNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQ 218
           +    L+ +NEKW+   +E A L A+RA L  EQ
Sbjct: 210 LGRSKLRGLNEKWMEQRMEEAGLAAKRAQLNYEQ 225

[Close]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL
Match: V4RSW9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-29
Identity = 74/197 (37.56%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 29  FNDEDEINLLNSYLQI-----SRSENPTKNSLPTLDSQAFDRLQTAVGPKFSHSVIADKL 88
           F D DEI LL  + ++     S S + T NS  TLDS +F+R+ +++G KF+H+ I DK+
Sbjct: 27  FTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITLDSSSFNRINSSLGSKFTHAQITDKI 86

Query: 89  HRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSPTPVTRKPQVISPSRLL---SRRI 148
            RL++ YHK AR+KS IKTPH + +  + + IWGK  T   ++ + +  S          
Sbjct: 87  RRLRVKYHKQARSKSLIKTPHDQALFKIAQLIWGKKKTNRKKEAKKVQNSASADDEDEGE 146

Query: 149 KQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDGLRRMNEKNLKDMNEKWVLLH 208
           +Q++   +E      +L  +PVL  E S+  P N VWR+ L+ +    LK+MN+KW+L+ 
Sbjct: 147 EQKNEQNEEREREGAELDEYPVLAGELSKYLPMNLVWREALKSLGNDKLKEMNDKWMLIG 206

Query: 209 IEGAELKARRAALLKEQ 218
           IE A++ +++A L+KEQ
Sbjct: 207 IEEAKIVSKKADLVKEQ 223

The following BLAST results are available for this feature:

BLAST of CsaV3_6G014420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46890.1	4.5e-123	100.00	hypothetical protein Csa_020607 [Cucumis sativus]	[more]
KAA0037301.1	1.3e-106	89.78	serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK...	[more]
KAG6570827.1	6.2e-72	67.57	hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6606028.1	3.5e-67	63.36	hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8637412.1	2.0e-30	83.33	hypothetical protein CSA_023389, partial [Cucumis sativus]	[more]

BLAST of CsaV3_6G014420.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAX7	2.2e-123	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1	[more]
A0A5A7T6T1	6.4e-107	89.78	Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LBY9	6.1e-33	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593690 PE=3 SV=1	[more]
A0A5J5C8J5	2.2e-30	41.59	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001981 PE=3 SV=1	[more]
V4RSW9	1.4e-29	37.56	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 ...	[more]

BLAST of CsaV3_6G014420.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 28..117 e-value: 2.8E-9 score: 37.5
IPR007592	GLABROUS1 enhancer-binding protein family	PANTHER	PTHR31662	BNAANNG10740D PROTEIN-RELATED	coord: 12..220
None	No IPR available	PANTHER	PTHR31662:SF39	SUBFAMILY NOT NAMED	coord: 12..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G014420	CsaV3_6G014420	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G014420.1.exon1	CsaV3_6G014420.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G014420.1.cds1	CsaV3_6G014420.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G014420.1	CsaV3_6G014420.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated