CsaV3_6G004850.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G004850.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr6: 4101117 .. 4105003 (+)
Sequence length	498
RNA-Seq Expression	CsaV3_6G004850.1
Synteny	CsaV3_6G004850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATTTTGACGTATGACTTGAGAATTACCTTTTATTGTTTAAGTACTTTTTTATAAGGTCTATTACCCGAACAAATCCCCGAGTAGACGTATCGAACAAATAAAGTTCCCACAACTGACAACCGTACATCAAAACACAGGGCGCGAAATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGAGTTGCAACCTCTTCTTGAGACACACAATCCAAGTTCGAACTCCAAATCTGTGAAGACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAGATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGTCGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGGTAAAGGTTCACAACTCTATTCGGTTCGATTTGAAAATTTCATTTATCTGGGGTTTTGTTAAATGAGGATGGAAAAAAGTATATACAGAGATATGCGTGTTGCCTTACCGTCCGATTTTTTTATTTTTATTTTTGCTGCTGTCAGCTGTGGGTGTTATTCTGCTGTTTGTTTAATCATGTGTATTATAAATATACACTTGAATTTTCTTTGATTGGAATTGAGGTTTAGGAATTGAAGGTTTTATGTTTAAGAATCATAAGATACCATGTAACATGCTTTTATGAATTTTATAATTGATGGTATGTGGGTGTAAGTTTGGGCGATCGCTCTCTAAGCCTATCCTTCATCTGGCCTTTTACTCAAAGTTGGCTTGAAATGAACAATAAGAATGGATTGATTATTGGAAATTTATTTCTCAAAAATGGCAAATGAAACAATGCGAGGAGAGTTCCTAGATTCGTGGAGGTATAGCTTATTGGTTATTGCACAAGGTTGAGTATGGACTTCACTTTAATGTTTGGGATGCTAGTTAGGTTCCTAATAGCATGAACTCCTCGAAAGCTATTCTCCAATGTTTTTCACTTCAATATTTGGTATCTTCCACTTATTCAATCCTAGTATATTTTACCATTCACCTACTTAGGAGGAGATTTTTCACAATTCACTTTCTAGAACAGCCTTATTCAATTTGGAGAATCTCGACCTTCCTTGTATTAACTTCCTTGCATTCTCTTTTTCCACTAAGATTTGGTACCTTAATATCGTTAAGGAGGTGAAATCGTTTTCTTTTCTGGCCCAATTATCCTTGGGGAAGTTCCACACCGTTGATGGCTTTAAGGGGCTGGCCACTTTTGTGCCTGTGTTGTTGTGGTGCGTTATTTGCAGAAGGCAGTGGAGTATGTGAACTGTATTATTGTCAGGAGTATGTTAAATAGTAGCTCATTTGTGGAGAATTTCTTCCGAACACTCCGCTGTGGTGTTCGCTCCCGCGCTCTGTTGGAGTTGTCATGGTATGATGGAGAAAATTGTCTTACATTTGCTGTTTTAGGACAAATATCATCTTCTTGATTTTTTGCTATTCTCAGGAACATTTGGCTGTTAACCTAGAGGATATTTTAGCGTATCCAAGGACCTTAGAAATCTTTTTATGTTGTAGCTAACTTTTAATGATTCGTTGGACCCATGAGTAAGTTTAGAATGACTTTCTATCAGCAGTTTTGAAAAGGAAAATAAATTAGTTGGCTTCTTCTAGTAGTTAAAATAATGTCTAGAATTTTGGGAGTACTTTTGATCGTGTAGCCAAAACATTACATTCAATTATATATATAATCATTTGTACATTTGACTATGAGTTTTATTTTTAATTTATAACCGTGGGTGTTTGGGCACCTATGTTTGAAAGTTGATCCCCAATACTTTTCTGATTTCTCTTGCAATCGTCAAATACAAACAGCCTCGAAATGATCCACAATTCATCAAAATTTTCTTGGAATACCTCTGTGTTCTTGCACACCCAGTATCTCTGCCGGGTTGACCTAGTGGTCCATAAGAACTATATAAATAAAAAATGGCTTAGAGGAAATAGGTACAAGCTATGGTGGCCACCTACTTGAGATTCAATATCCTACATGTTACCTTGGTTACCACATATAGTGGGATTTGACAATTTTCTTGTTAGATTGGTCTAATTGCATGTTAGAAATCCTAACATTCAATAACTATCTCATATTTTTCATGTTAAGCTGACATGACAACTAGTTAGCAGTGCAACTTTTGGAATTGGTAGAGTACTTCAATTCTGTGTGTATCCTATGTTTTAAGTGTTTAACACATGGCCTCGTGGGCATCCGGCTATTTGTCTTGTGACTCTTGCCTCTAGGCTAACCTCGTGATAGCACAAGCTCAGCTTTATTTAATTTATTATGAGAATCTTATTCTTTTCTACATGATAAGACGTGTCTCTTTGGCAATGATCAAGAAGTCCAATTGCGAGGTTACATGTCAAGATCCCAGTTTTTAATGACTTCAATATTCTTGAATTGCCCCAATATTTTTTTCCATACATGTCCCCACCCTCAATCTTTTCTTGACTGCTATCTGTATGTATTACATGTCTATATTATTTATCGACAAAAAGATTGTATTTCATGGACGAGATGAAACTACAAGAAATAAGAGCACCCTACAACAAGAGTTGGATGAATACTTTCAAAATTAAGTGAGTCAAAGGAGACTCCAACGTATTTTATACTCTCATTTCCTTTTGCCATCATTTGATTTATTTGGGCAGAATCGAACACGCAGGTTTTTGCTGAAGATACAGTAGTTTTGGGGACATGACTCTGTTCGACTTTTTCCTCTTGGCTATATCTTAGTCCTGTTCCATGCTCCTTTGTTAATTATTAATTGACTTTTAACAGCTCAAGGCAACTGCATTAACACGGAGCAAAAATCTAGTTATTTTTGTTCTTTGCCTTTTGATGGCTCCTCTTCTTCATCAGTTTGCTAATTTCCATTCATTTCAATTCCAATTAACATGGTAAGTTTATTAGCAAACTGATGGAGATATGCACCAATTTTGTTTGAAGCTGTTTATATTCATTCTTTTACATCAGATTCAACTAAATGGCTAACTTCATATGTTCATCTCTTTACTTCAGGATTCCCTGATCAAACCAGTAACCAGGATCATTTTTGGCGTGGCAATTATAACCATTTTGATAACGTTTCTCTCTCGAGACTCACAAGGGTGGATGAAGAAACTTAATATCACTGGGAACTTCCCTCCTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACTCGCTCAAGGAAGAGAACTAAGGACTTACTTAAAAAGTACGGTTGGTAATTGTCTAGTGCTTCATCAACTTTTGTTCCTTCAAAAAAGAAAAGAAAAAAAGTCAATCCTCCAATAGAAAGTGGAAATTGATTCTAGGTTCTCAATTTCGAACTTCCAAAAATAGGAGACAGAATACTGTACCGTATTGCTAGCAAAAGCGAACCATTCTCGGTCCATCGGTACCATAAATTCCCCATCTTAATTTGTTCTCCGATATGTGTAGATAAGCAGCCTCTGTTTGCTGGACTGAAATTTGTTTGAGTTTGAGCCATAGTTTTAACTTTTTAGGTTGGGTGAAAGCTTTCATCACTTTGAGTTGCATTCTTCGGATTTGCTCACGAAGTAAATTTAGATTCTGTTTTATGTTTGGTTTATAAATTCACTACTGTGTTGTATTAATTTGATCAAAACCCTATCAACATTATGCTCTTGTTTAGATTCTGTTTAAAAAGGCTGCTTAATATTTAATTGTAAATTAAGTGTGAGTTAAGTTTATAATGCCTTTGGT

mRNA sequence

ATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGAGTTGCAACCTCTTCTTGAGACACACAATCCAAGTTCGAACTCCAAATCTGTGAAGACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAGATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGTCGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGCTCAAGGCAACTGCATTAACACGGAGCAAAAATCTAGTTATTTTTGTTCTTTGCCTTTTGATGGCTCCTCTTCTTCATCAGTTTGCTAATTTCCATTCATTTCAATTCCAATTAACATGGATTCCCTGA

Coding sequence (CDS)

ATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGAGTTGCAACCTCTTCTTGAGACACACAATCCAAGTTCGAACTCCAAATCTGTGAAGACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAGATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGTCGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGCTCAAGGCAACTGCATTAACACGGAGCAAAAATCTAGTTATTTTTGTTCTTTGCCTTTTGATGGCTCCTCTTCTTCATCAGTTTGCTAATTTCCATTCATTTCAATTCCAATTAACATGGATTCCCTGA

Protein sequence

MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEPKLKATALTRSKNLVIFVLCLLMAPLLHQFANFHSFQFQLTWIP*

Homology

[Close]

BLAST of CsaV3_6G004850.1 vs. NCBI nr
Match: KAE8646658.1 (hypothetical protein Csa_005539 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS
Sbjct: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNLVIFVLCLLMAPLLHQFANFHSFQFQLTWIP 166
           EPKLKATALTRSKNLVIFVLCLLMAPLLHQFANFHSFQFQLTWIP
Sbjct: 121 EPKLKATALTRSKNLVIFVLCLLMAPLLHQFANFHSFQFQLTWIP 165

[Close]

BLAST of CsaV3_6G004850.1 vs. NCBI nr
Match: XP_004140944.1 (uncharacterized protein LOC101218374 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 2.5e-62
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS
Sbjct: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNLVIFVLCLL 144
           EPK    +L +    +IF + ++
Sbjct: 121 EPK---DSLIKPVTRIIFGVAII 140

[Close]

BLAST of CsaV3_6G004850.1 vs. NCBI nr
Match: KAA0031648.1 (uncharacterized protein E6C27_scaffold139G004210 [Cucumis melo var. makuwa] >TYK04462.1 uncharacterized protein E5676_scaffold409G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKS
Sbjct: 1   MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNL-----------VIFVLCLLMAPLLHQFANFHSF 158
           EPK+ A +   SK +           V +V C+L+  +L+  +   +F
Sbjct: 121 EPKV-ANSTNSSKAILQCFPLQYLKAVEYVNCILVRSMLNSSSFVENF 167

[Close]

BLAST of CsaV3_6G004850.1 vs. NCBI nr
Match: XP_008456707.1 (PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 6.7e-60
Identity = 120/143 (83.92%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKS
Sbjct: 1   MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNLVIFVLCLL 144
           EPK    +L +    +IF + ++
Sbjct: 121 EPK---DSLIKPVTRIIFGVAII 140

[Close]

BLAST of CsaV3_6G004850.1 vs. NCBI nr
Match: XP_038884244.1 (uncharacterized protein LOC120075142 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-57
Identity = 112/123 (91.06%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSESEIREVE+T+SKSELQPLLE+ NP+ NSK V+TKVPE+EIHL+RQGKGPIDVFKS
Sbjct: 20  MDQSESEIREVEDTSSKSELQPLLESQNPNPNSKIVRTKVPEVEIHLYRQGKGPIDVFKS 79

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDIL+KYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 80  SLGGWDQDQLEVRDILEKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 139

Query: 121 EPK 124
           EPK
Sbjct: 140 EPK 142

[Close]

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL
Match: A0A0A0K9G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052730 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS
Sbjct: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNLVIFVLCLL 144
           EPK    +L +    +IF + ++
Sbjct: 121 EPK---DSLIKPVTRIIFGVAII 140

[Close]

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL
Match: A0A5A7SM03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00680 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.6e-61
Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKS
Sbjct: 1   MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNL-----------VIFVLCLLMAPLLHQFANFHSF 158
           EPK+ A +   SK +           V +V C+L+  +L+  +   +F
Sbjct: 121 EPKV-ANSTNSSKAILQCFPLQYLKAVEYVNCILVRSMLNSSSFVENF 167

[Close]

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL
Match: A0A1S3C3V7 (uncharacterized protein LOC103496571 OS=Cucumis melo OX=3656 GN=LOC103496571 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 120/143 (83.92%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKS 60
           MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKS
Sbjct: 1   MDQSETEIREVQETNSKSELQPLLETQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKS 60

Query: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120
           SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG
Sbjct: 61  SLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDG 120

Query: 121 EPKLKATALTRSKNLVIFVLCLL 144
           EPK    +L +    +IF + ++
Sbjct: 121 EPK---DSLIKPVTRIIFGVAII 140

[Close]

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL
Match: A0A6J1JTD1 (uncharacterized protein LOC111487320 OS=Cucurbita maxima OX=3661 GN=LOC111487320 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.8e-57
Identity = 111/141 (78.72%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 3   QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSL 62
           QSESEIRE+EET+S SELQPLL++ NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSL
Sbjct: 5   QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64

Query: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122
           GGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEI+IDGEP
Sbjct: 65  GGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIYIDGEP 124

Query: 123 KLKATALTRSKNLVIFVLCLL 144
           K    +L +    ++FV+ ++
Sbjct: 125 K---DSLIKPVTRIVFVVAII 142

[Close]

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL
Match: A0A6J1HAT7 (uncharacterized protein LOC111461110 OS=Cucurbita moschata OX=3662 GN=LOC111461110 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.9e-56
Identity = 111/141 (78.72%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 3   QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSL 62
           QSESEIRE+EET+S SELQPLL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSL
Sbjct: 5   QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSL 64

Query: 63  GGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEP 122
           GGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYR GAEI+IDGEP
Sbjct: 65  GGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRGGAEIYIDGEP 124

Query: 123 KLKATALTRSKNLVIFVLCLL 144
           K    +L +    ++FV+ ++
Sbjct: 125 K---DSLIKPVTGIVFVVAII 142

[Close]

BLAST of CsaV3_6G004850.1 vs. TAIR 10
Match: AT1G71780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 9   REVEETNSKSELQPLLETHNPSS--NSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWD 68
           +E+EET       PLLE   P S   S +   KVPE+EIHL++ GKGPIDVFKS+LGG++
Sbjct: 18  QEIEETT------PLLENSQPESELRSTTAAAKVPEVEIHLYKCGKGPIDVFKSNLGGYE 77

Query: 69  QDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTYRDGAEIFIDGEPK 124
           QDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS+L YRDGA I+IDGEP+
Sbjct: 78  QDQLEVRSILEKYGLKAIFAFNVEKGRAVPIRFHPRNGRSVLPYRDGAVIYIDGEPQ 128

The following BLAST results are available for this feature:

BLAST of CsaV3_6G004850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646658.1	1.7e-87	100.00	hypothetical protein Csa_005539 [Cucumis sativus]	[more]
XP_004140944.1	2.5e-62	88.11	uncharacterized protein LOC101218374 [Cucumis sativus]	[more]
KAA0031648.1	1.8e-60	75.00	uncharacterized protein E6C27_scaffold139G004210 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008456707.1	6.7e-60	83.92	PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]	[more]
XP_038884244.1	2.4e-57	91.06	uncharacterized protein LOC120075142 [Benincasa hispida]	[more]

BLAST of CsaV3_6G004850.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G004850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9G4	1.2e-62	88.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052730 PE=4 SV=1	[more]
A0A5A7SM03	8.6e-61	75.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C3V7	3.3e-60	83.92	uncharacterized protein LOC103496571 OS=Cucumis melo OX=3656 GN=LOC103496571 PE=...	[more]
A0A6J1JTD1	9.8e-57	78.72	uncharacterized protein LOC111487320 OS=Cucurbita maxima OX=3661 GN=LOC111487320...	[more]
A0A6J1HAT7	4.9e-56	78.72	uncharacterized protein LOC111461110 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of CsaV3_6G004850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71780.1	1.1e-36	62.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..37
None	No IPR available	PANTHER	PTHR35475:SF3	SUBFAMILY NOT NAMED	coord: 10..131
None	No IPR available	PANTHER	PTHR35475	WD REPEAT PROTEIN	coord: 10..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G004850	CsaV3_6G004850	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G004850.1.exon1	CsaV3_6G004850.1.exon1	exon
CsaV3_6G004850.1.exon2	CsaV3_6G004850.1.exon2	exon
CsaV3_6G004850.1.exon3	CsaV3_6G004850.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G004850.1.cds1	CsaV3_6G004850.1.cds1	CDS
CsaV3_6G004850.1.cds2	CsaV3_6G004850.1.cds2	CDS
CsaV3_6G004850.1.cds3	CsaV3_6G004850.1.cds3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G004850.1	CsaV3_6G004850.1-protein	polypeptide