CsaV3_6G000720.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G000720.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	WRC domain-containing protein
Location	chr6: 468453 .. 470354 (-)
Sequence length	864
RNA-Seq Expression	CsaV3_6G000720.1
Synteny	CsaV3_6G000720.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGTTAAACCCTGACTATCGAGTTGTGTGTGAGATCTGCAAGAAAACAAGAGAGAGAGAATAAGAGAGAGGGAGAGAGGGAGAGAGATTTTTCCATCTTCAAGTTTTTCTTCTTTTTTTTTTCTCACCCGAGAAAATAAGAGAAAATTCGTCAGAAAATTTTCGAGCGGATTATGTACAAATTTATATAATCTTTTGTGGCCGTTTTCGCTTTTGTGTTCTGGAATCTGCTTCTGGTTTTTTTCTTTTTTGTTCTCTCTTCGTTTTTTCTTCTCCGTCATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGGTTTATATTTAATATATATATAGAGAGAGAGAGATATGAAGAAATGGAGAAATTTCTTATTCTTTATTCTTTTAAATCTTCAGTCTCTTCTTCTTCTTCTAGATCTGCTATTAATTTACCTGTTCTCTTTTCTCTTTATTTCCCTCTCTTTTTAGGGTTCTTCGTTTCCCCTTCCACTTTAGGGTTCATTCCAAAACCCTAAAAATTATCCTCATTCTTCTCGCGATTAGGGTAATGAATCTTACTTACTTTCATTTCTATTTCTCTTTGTTTCATTTTTGCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGGTGAGTTTACTTGTTACTTTTCTTGCTGATATTTATTTTTGCATTGTTTCTGGTCTTTTGTTTTGCTTTGTTTCGTTTTTTGTGTGTGTGATTCTTTCCCTTGCGTAATGGGTGACGAACTAAACACTCATACGATAATCTGAAATCGTTTCTGTGGAGAGAGATATTCTGGATGTTTGATTGTTATTGTCTGCCTGTGTGGATTTTGAAGATGGTGTTTGAAATTTTATTTATATATATGAATCACAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAAAAGAAGAAGTTGGATTTGAATTTGGAATTAGGACTTTGGGTTTTGGTTTTCGTGGTGGGAAATTATTTGTGATGGTTTTTCTTCTTCGTGTTTGAAACAATTGTTTGTTAGGGTTGTGAAGGATTTCTCGTTTTTCTTTTTTATTTTTTCTTTTTCTTCTTTCTTCTTTCTTCTTTCTTTTTTCTTTTTTCTTTTTGGTGTAACATATTATTATTATTAATATTA

mRNA sequence

ATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAA

Coding sequence (CDS)

ATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAA

Protein sequence

MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM*

Homology

[Close]

BLAST of CsaV3_6G000720.1 vs. NCBI nr
Match: XP_011656350.1 (uncharacterized protein LOC105435722 [Cucumis sativus] >KGN45675.2 hypothetical protein Csa_005222 [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 5.6e-155
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR
Sbjct: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT
Sbjct: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240

Query: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM
Sbjct: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 287

[Close]

BLAST of CsaV3_6G000720.1 vs. NCBI nr
Match: XP_008458199.1 (PREDICTED: uncharacterized protein LOC103497701 [Cucumis melo] >TYK03028.1 protein ecdysoneless-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-144
Identity = 273/287 (95.12%), Postives = 279/287 (97.21%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPE LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEVLQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNG 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEES KLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESAKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DS+LK KKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSA GGTVSRRIR
Sbjct: 121 DSNLKFKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSAAGGTVSRRIR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PAR SKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEE+GGKSSENTTGIRSNATT
Sbjct: 181 PARSSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEEGGKSSENTTGIRSNATT 240

Query: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           PSPSD+EELDYVE DEDDEEE+ DG+G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 PSPSDVEELDYVEDDEDDEEEE-DGDGDGGKKRMRKPVKARSLKSLM 286

[Close]

BLAST of CsaV3_6G000720.1 vs. NCBI nr
Match: XP_038875417.1 (uncharacterized protein LOC120067877 [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 4.3e-131
Identity = 251/287 (87.46%), Postives = 268/287 (93.38%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSA+E  SVPE LQTHICQLNQSPWDVIPLHQHDTNQ+EEAEDSFNE
Sbjct: 1   MRIRKNAKLSPLLFSAVE--SVPEVLQTHICQLNQSPWDVIPLHQHDTNQVEEAEDSFNE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NAS  DS+GAVESV+SMMEES KLSNNNI ITNGNEVMADKDGDY ED +ENG+GFEKLV
Sbjct: 61  NASLDDSIGAVESVASMMEESAKLSNNNIAITNGNEVMADKDGDYREDLNENGDGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DSSLKCKKQFKEEDYSSFSSD H RRSFLRSSENNYYSTL+NCSI+KKSA GGTVSRR+R
Sbjct: 121 DSSLKCKKQFKEEDYSSFSSDHHDRRSFLRSSENNYYSTLNNCSIAKKSAAGGTVSRRMR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PAR SKK V+ AAGGSNPYEFYYYSGFGPLWGKKRR+RGGEED GKSSENTTGIRSNATT
Sbjct: 181 PARSSKKTVSVAAGGSNPYEFYYYSGFGPLWGKKRRERGGEEDSGKSSENTTGIRSNATT 240

Query: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           PSPSD+EELDY+E D+D+EEE+GD  G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 PSPSDVEELDYMEDDDDEEEENGD--GDGGKKRMRKPVKARSLKSLM 283

[Close]

BLAST of CsaV3_6G000720.1 vs. NCBI nr
Match: XP_022958971.1 (uncharacterized protein LOC111460101 [Cucurbita moschata])

HSP 1 Score: 408.7 bits (1049), Expect = 4.2e-110
Identity = 233/293 (79.52%), Postives = 250/293 (85.32%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSA+E   VP+ LQTH+CQLNQSPWDVIPL QH  +QLEE EDSF E
Sbjct: 1   MRIRKNAKLSPLLFSAVE--CVPQVLQTHVCQLNQSPWDVIPLEQHAAHQLEEVEDSFYE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NAS G S+GAVESV+SMME S KLSNNNIVITN +EVMADKDGDYCEDFDENG+ FEKLV
Sbjct: 61  NASLGGSIGAVESVASMMEGSAKLSNNNIVITNESEVMADKDGDYCEDFDENGDEFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSD--IHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRR 180
           DSSL   KQF+EEDYSSFS D   HHRRS LRSSENNYYSTL+N SISKKSA G TVSRR
Sbjct: 121 DSSL---KQFQEEDYSSFSFDRRHHHRRSHLRSSENNYYSTLNNSSISKKSAAGCTVSRR 180

Query: 181 IRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           +RP + SKKAV+AA  GSNPYEFYYYSGFGPLWGKKRR+RGG EDGGKSSEN  GIRSNA
Sbjct: 181 MRPPKASKKAVSAAT-GSNPYEFYYYSGFGPLWGKKRRERGG-EDGGKSSENRAGIRSNA 240

Query: 241 TTPSPS----DMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           T PSPS    D EELDYVE D+DDEEE+ D  G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 TVPSPSPSEMDGEELDYVEEDDDDEEEEKD--GDGGKKRMRKPVKARSLKSLM 284

[Close]

BLAST of CsaV3_6G000720.1 vs. NCBI nr
Match: KAG6575189.1 (hypothetical protein SDJN03_25828, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013752.1 hypothetical protein SDJN02_23919, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.7 bits (1036), Expect = 1.4e-108
Identity = 231/293 (78.84%), Postives = 248/293 (84.64%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSA+E   VP+ LQTH+CQLNQSPWDVIPL QH  +QLEE EDSF E
Sbjct: 1   MRIRKNAKLSPLLFSAVE--CVPQVLQTHVCQLNQSPWDVIPLEQHAAHQLEEVEDSFYE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NAS G S+GAVESV+SMME S KLSNNNIVITN +EVMADKDGDYCED DENG+ FEKLV
Sbjct: 61  NASLGGSIGAVESVASMMEGSAKLSNNNIVITNESEVMADKDGDYCEDLDENGDEFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSD--IHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRR 180
           DSSL   KQF+EEDYSSFS D   HHRRS LRSSENNYYSTL+N SISKKSA G TVSRR
Sbjct: 121 DSSL---KQFQEEDYSSFSFDRRHHHRRSHLRSSENNYYSTLNNSSISKKSAAGCTVSRR 180

Query: 181 IRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           +RP + SKKAV+AA  GSNPYEFYYYSGFGPLWGKKRR+RGG EDGGKSSEN  GIRSNA
Sbjct: 181 MRPPKASKKAVSAAT-GSNPYEFYYYSGFGPLWGKKRRERGG-EDGGKSSENRAGIRSNA 240

Query: 241 TTPSPS----DMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           T PSPS    D EELDYVE D+DDE E+ D  G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 TVPSPSPSEMDGEELDYVEEDDDDEVEEKD--GDGGKKRMRKPVKARSLKSLM 284

[Close]

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL
Match: A0A0A0K7G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005150 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 1.0e-146
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 17  MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 76
           MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS
Sbjct: 1   MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 60

Query: 77  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 136
           MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS
Sbjct: 61  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 120

Query: 137 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 196
           SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS
Sbjct: 121 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 180

Query: 197 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSPSDMEELDYVEYDE 256
           NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSPSDMEELDYVEYDE
Sbjct: 181 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSPSDMEELDYVEYDE 240

Query: 257 DDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           DDEEEDGDGEGEGGKKRMRKPVKARSLKSLM
Sbjct: 241 DDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 271

[Close]

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL
Match: A0A5D3BVK5 (Protein ecdysoneless-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001230 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 273/287 (95.12%), Postives = 279/287 (97.21%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPE LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEVLQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNG 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEES KLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESAKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DS+LK KKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSA GGTVSRRIR
Sbjct: 121 DSNLKFKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSAAGGTVSRRIR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PAR SKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEE+GGKSSENTTGIRSNATT
Sbjct: 181 PARSSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEEGGKSSENTTGIRSNATT 240

Query: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           PSPSD+EELDYVE DEDDEEE+ DG+G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 PSPSDVEELDYVEDDEDDEEEE-DGDGDGGKKRMRKPVKARSLKSLM 286

[Close]

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL
Match: A0A1S3C7F3 (uncharacterized protein LOC103497701 OS=Cucumis melo OX=3656 GN=LOC103497701 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 273/287 (95.12%), Postives = 279/287 (97.21%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPE LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEVLQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNG 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEES KLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESAKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DS+LK KKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSA GGTVSRRIR
Sbjct: 121 DSNLKFKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSAAGGTVSRRIR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PAR SKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEE+GGKSSENTTGIRSNATT
Sbjct: 181 PARSSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEEGGKSSENTTGIRSNATT 240

Query: 241 PSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           PSPSD+EELDYVE DEDDEEE+ DG+G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 PSPSDVEELDYVEDDEDDEEEE-DGDGDGGKKRMRKPVKARSLKSLM 286

[Close]

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL
Match: A0A6J1H3L8 (uncharacterized protein LOC111460101 OS=Cucurbita moschata OX=3662 GN=LOC111460101 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.0e-110
Identity = 233/293 (79.52%), Postives = 250/293 (85.32%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSA+E   VP+ LQTH+CQLNQSPWDVIPL QH  +QLEE EDSF E
Sbjct: 1   MRIRKNAKLSPLLFSAVE--CVPQVLQTHVCQLNQSPWDVIPLEQHAAHQLEEVEDSFYE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NAS G S+GAVESV+SMME S KLSNNNIVITN +EVMADKDGDYCEDFDENG+ FEKLV
Sbjct: 61  NASLGGSIGAVESVASMMEGSAKLSNNNIVITNESEVMADKDGDYCEDFDENGDEFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSD--IHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRR 180
           DSSL   KQF+EEDYSSFS D   HHRRS LRSSENNYYSTL+N SISKKSA G TVSRR
Sbjct: 121 DSSL---KQFQEEDYSSFSFDRRHHHRRSHLRSSENNYYSTLNNSSISKKSAAGCTVSRR 180

Query: 181 IRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           +RP + SKKAV+AA  GSNPYEFYYYSGFGPLWGKKRR+RGG EDGGKSSEN  GIRSNA
Sbjct: 181 MRPPKASKKAVSAAT-GSNPYEFYYYSGFGPLWGKKRRERGG-EDGGKSSENRAGIRSNA 240

Query: 241 TTPSPS----DMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           T PSPS    D EELDYVE D+DDEEE+ D  G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 TVPSPSPSEMDGEELDYVEEDDDDEEEEKD--GDGGKKRMRKPVKARSLKSLM 284

[Close]

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL
Match: A0A6J1L0N0 (uncharacterized protein LOC111499298 OS=Cucurbita maxima OX=3661 GN=LOC111499298 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.8e-106
Identity = 228/295 (77.29%), Postives = 247/295 (83.73%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSA+E   VP+ LQTH+CQLNQSPWDVIPL QH  +QLEE EDSF E
Sbjct: 1   MRIRKNAKLSPLLFSAVE--CVPQILQTHVCQLNQSPWDVIPLEQHAAHQLEEVEDSFYE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NAS G S+GAVESV+SMME S KLSNNNIVITN +EVMADKDGDYCED DENG+ FEKLV
Sbjct: 61  NASLGGSIGAVESVASMMEGSAKLSNNNIVITNESEVMADKDGDYCEDLDENGDEFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSD--IHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRR 180
           DSSL   KQF+EEDYSSFS D   +HRRS LRSSENNYYST +N SISKKSA G TVSRR
Sbjct: 121 DSSL---KQFQEEDYSSFSFDRRHNHRRSHLRSSENNYYSTPNNSSISKKSAAGCTVSRR 180

Query: 181 IRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           +R  + SKKAV+A+  GSNPYEFYYYSGFGPLWGKKRR+RGG EDGGKSSEN  GIRSNA
Sbjct: 181 MRQPKASKKAVSAST-GSNPYEFYYYSGFGPLWGKKRRERGG-EDGGKSSENRAGIRSNA 240

Query: 241 TTPSPS------DMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM 288
           T PSPS      D EELDYVE D+DDEEE+ D  G+GGKKRMRKPVKARSLKSLM
Sbjct: 241 TVPSPSPSPSEMDGEELDYVEEDDDDEEEEKD--GDGGKKRMRKPVKARSLKSLM 286

[Close]

BLAST of CsaV3_6G000720.1 vs. TAIR 10
Match: AT4G00310.1 (Putative membrane lipoprotein )

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-17
Identity = 105/323 (32.51%), Postives = 143/323 (44.27%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAED-SFN 60
           MRIRKN KLS +L S        E   T++C LNQSPWDVIP+      +L    D S+ 
Sbjct: 1   MRIRKNTKLSSVLLSTAGCGG--ERPDTYVCHLNQSPWDVIPVSSSGDCELTNLVDSSWF 60

Query: 61  ENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKL 120
              S   S  +   +   + E            NGN  + D + D  + F+ + +  + L
Sbjct: 61  LPLSSSSSSSSPPLIHKFIGEEDSF--------NGNVSLGDCN-DTAQRFNSSVSSNQSL 120

Query: 121 VDSSLKCKKQFKEEDYSSFS---------SDIHHRRSFLRSSENNYYSTLDNCSISKKSA 180
           V S  K      EED  + S         SD + ++S      +   ++ D+    K   
Sbjct: 121 V-SVEKLNLNAAEEDKYAISPEVEDPMDQSDDYDKKSEALEPNSPVKTSGDD---EKVVV 180

Query: 181 TGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSEN 240
           T  T  +R RP    KK   +A    NPYEFYYYSGFGP WG+K   RGG +D      +
Sbjct: 181 TIPTAPKRGRPRGSGKKV--SAPALKNPYEFYYYSGFGPRWGRK---RGGSDDEKMVIND 240

Query: 241 TTGIRSNATTPSPSD-------------MEELDYVEYDEDDEEEDGDGEGEGGKKRM--- 288
           +   RS+A++ S  D              +E D+V+ D D  E+D  G   G KK+    
Sbjct: 241 SKKSRSSASSSSDEDGHKTAAFGGGSVSFDEFDFVDEDYDVMEQD-QGSDHGRKKKNEKM 300

[Close]

BLAST of CsaV3_6G000720.1 vs. TAIR 10
Match: AT4G00310.2 (Putative membrane lipoprotein )

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-17
Identity = 105/323 (32.51%), Postives = 143/323 (44.27%), Query Frame = 0


Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAED-SFN 60
           MRIRKN KLS +L S        E   T++C LNQSPWDVIP+      +L    D S+ 
Sbjct: 1   MRIRKNTKLSSVLLSTAGCGG--ERPDTYVCHLNQSPWDVIPVSSSGDCELTNLVDSSWF 60

Query: 61  ENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKL 120
              S   S  +   +   + E            NGN  + D + D  + F+ + +  + L
Sbjct: 61  LPLSSSSSSSSPPLIHKFIGEEDSF--------NGNVSLGDCN-DTAQRFNSSVSSNQSL 120

Query: 121 VDSSLKCKKQFKEEDYSSFS---------SDIHHRRSFLRSSENNYYSTLDNCSISKKSA 180
           V S  K      EED  + S         SD + ++S      +   ++ D+    K   
Sbjct: 121 V-SVEKLNLNAAEEDKYAISPEVEDPMDQSDDYDKKSEALEPNSPVKTSGDD---EKVVV 180

Query: 181 TGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSEN 240
           T  T  +R RP    KK   +A    NPYEFYYYSGFGP WG+K   RGG +D      +
Sbjct: 181 TIPTAPKRGRPRGSGKKV--SAPALKNPYEFYYYSGFGPRWGRK---RGGSDDEKMVIND 240

Query: 241 TTGIRSNATTPSPSD-------------MEELDYVEYDEDDEEEDGDGEGEGGKKRM--- 288
           +   RS+A++ S  D              +E D+V+ D D  E+D  G   G KK+    
Sbjct: 241 SKKSRSSASSSSDEDGHKTAAFGGGSVSFDEFDFVDEDYDVMEQD-QGSDHGRKKKNEKM 300

The following BLAST results are available for this feature:

BLAST of CsaV3_6G000720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656350.1	5.6e-155	100.00	uncharacterized protein LOC105435722 [Cucumis sativus] >KGN45675.2 hypothetical ...	[more]
XP_008458199.1	2.6e-144	95.12	PREDICTED: uncharacterized protein LOC103497701 [Cucumis melo] >TYK03028.1 prote...	[more]
XP_038875417.1	4.3e-131	87.46	uncharacterized protein LOC120067877 [Benincasa hispida]	[more]
XP_022958971.1	4.2e-110	79.52	uncharacterized protein LOC111460101 [Cucurbita moschata]	[more]
KAG6575189.1	1.4e-108	78.84	hypothetical protein SDJN03_25828, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_6G000720.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G000720.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7G9	1.0e-146	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005150 PE=4 SV=1	[more]
A0A5D3BVK5	1.3e-144	95.12	Protein ecdysoneless-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C7F3	1.3e-144	95.12	uncharacterized protein LOC103497701 OS=Cucumis melo OX=3656 GN=LOC103497701 PE=...	[more]
A0A6J1H3L8	2.0e-110	79.52	uncharacterized protein LOC111460101 OS=Cucurbita moschata OX=3662 GN=LOC1114601...	[more]
A0A6J1L0N0	1.8e-106	77.29	uncharacterized protein LOC111499298 OS=Cucurbita maxima OX=3661 GN=LOC111499298...	[more]

BLAST of CsaV3_6G000720.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00310.1	5.8e-17	32.51	Putative membrane lipoprotein	[more]
AT4G00310.2	5.8e-17	32.51	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..265
None	No IPR available	PANTHER	PTHR34680	EXPRESSED PROTEIN	coord: 1..287
None	No IPR available	PANTHER	PTHR34680:SF3	EXPRESSED PROTEIN	coord: 1..287

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G000720	CsaV3_6G000720	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000720.1.exon3	CsaV3_6G000720.1.exon3	exon
CsaV3_6G000720.1.exon2	CsaV3_6G000720.1.exon2	exon
CsaV3_6G000720.1.exon1	CsaV3_6G000720.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000720.1.cds3	CsaV3_6G000720.1.cds3	CDS
CsaV3_6G000720.1.cds2	CsaV3_6G000720.1.cds2	CDS
CsaV3_6G000720.1.cds1	CsaV3_6G000720.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000720.1	CsaV3_6G000720.1-protein	polypeptide