CsaV3_5G031330.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G031330.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	PMEI domain-containing protein
Location	chr5: 25618171 .. 25620488 (-)
Sequence length	483
RNA-Seq Expression	CsaV3_5G031330.1
Synteny	CsaV3_5G031330.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCGATCAACTTGAAACTTAGACAACCGTGAAAAGTAACCCTAACATGCTTAATTCGGCTAAAATTTTGGATACCTAACACCCACCTTCCGAGCTTTTGGCAAACTAAAAAAGTGAAACAAATTCAACACTAAAATTAACCTTTTTGTTAGGTCTAAGAAAAGATAAAATGTTATTGACCAATTGTCACTCTATAATCAAGGAAAGCCTCGTAACTTGTCTTCCATCAAAATAGAACCACCCGTTCTTATTGGGGCAGTTATCCAACTGCCATTGAAGTAATATAAAAAAGCCAAACTCCCCATGCTCACAAAACCACCCCCTGCCCGTTCCTCATTTTTGCCACCTCGAGAAAGAAACCCAAAAACAAATAAAGCAATTCATAGCGAAGATAATTAATTAAATTAACAATGGGTGAAAAGCATTTGGTTTCTTTCTCAATGGTCTTTCTCCTCGTCGCCGTCTTCATCAGCCAAGCCCAAGGATCAGCCCTCTGTGACGAAGCTGCTTTCCCTGCACTCTGTCGGTCCACTGTGAAAGGCGCATCCGATCCAACATCAGCCTTGAAGATCACCATCGAACACCTCATTTTCGAAACGAAACGCGCGAAAGATTCAAGCTTGAAGATTGGGTCATTGAAGTCTCTAGGCGTGTGCAAACAGAACTTCGATGATGCCGTCGACGACCTGCAGAGCAGTCTGGCGTATATGCAGAAAAAAGACATCCCAAGCCTGAAAATCAACCTTTCCGCTGCACTGACTTTCTACTCCACATGTGACGATGCGGTGGTGGAGAGTGGCGACCAAAAGAAAGCTTCCACAGTCTTGAGCAACGACCTTCTGCTGCAACATTTGGCCGCAAATTGCTTGCACTTATCCACTTTGTTGAAGTAAAAATTAATATATACGAAGAGGAACGGGCAGGGAGGTTCGACCAAACCGACGTGTCGTTTTGGTCTCAAATTTATTTCGATGTTGTAGTACTAAAATAATCTAAAACGGCGACAACTAAATCAAAAGTACACAAATTATATTTTCATGTTTGATGATGTACTAAAAAATATGGATTGGTCAATACATATATTATTTTCATTCATTTAACCTAAATTTAGTACGTCCTTGATAAAAATCTAAAAATATAAATATCCATAAGTTATGGAAATAAGTAGTGGGGTAAAGAAATTGAAACCCAATGCTTAATTAATTTGAAGGTTATTTACAATCTAATTATGGTTAAGGGTGCATTCTTCGTATTAGCATTATGGCATTGCAAACTGCAATTGCTTTTTAAACAAAAGTTTTCTATATAAGAAATTAAAAGAGTATAATCGTAAAAGAGAAAAAAAAAAAGGTTGAAAAATTACTTCTAACAATATATTAGAAAGAGGGTTTTGTGTGGATTATATTAGACGTTTTTGGTTAGATGATTTTTATTTTTAAGAACATGTATAACAAATCATGATTAGATAAACACATGGTTTTTTCTTTTTCTTTTTACCATTATATGTTTAATTATATGTTTATCGGTGTTCGAATTTTGTTCTCTAGCTAAACATGTAGAAAGGAATGCCACTTCTTTTCTTTGAACATTACTTACTTTTTTTTATCTTGTGGTAGTTAAGTAAGCCTATATTTATAAGAATGCTCTTTGACACATAGCTAAGGCTAAGTGTGAGACAACATAGGTGCCAAAAATGTTTTAGGTCGATGGTGATGGTAATGATAATATAATTTAATTAAATATCACTTAATTTTTTTTTTATCAATGAATGATCAATGATTTGAGCTAGAGTGTATTTTAATCCCCTGCCATTTTTTTTTTTGAGATAGATGAAAGATCATGTCTTTTATTGAAAAAAAGTATTATGAATTTTGTCTTTTGGTAATTTTTTTATATATATTGAATGGTAAATAGTTTTTTCTTCTTCTATTTTTTCTTTGAAAAAAACTAAACTAAAATAATTATGATGCAAAACTTTAATTTTAATTTTAATAGCAATTTTCAAAATGAAAAATAATTATGTAAAAACGGCAAGTAGGTATTTAAAAACCAAACTTGAATCATGAAACCTAGAAATTAAATTAAGAACTTTGAATTTTAAAAGTCTAAGACATGTGAACTAAGTTGAAGCCATGCTCATCATTTGAGCCGTAAAACAAATAGAAAACAAAGGCTAACCTCTAGCAAAAAATAAAAATAAAGATGCTTCACCAAAATATCTTTTGAAAAACCATTGCATGAAAACCAATGTTATGGTTGTTATATCATATTATTTATATCTAAAAAAATTTATTATAGATAGTTTAGTAAAAAAAAAC

mRNA sequence

ATGGGTGAAAAGCATTTGGTTTCTTTCTCAATGGTCTTTCTCCTCGTCGCCGTCTTCATCAGCCAAGCCCAAGGATCAGCCCTCTGTGACGAAGCTGCTTTCCCTGCACTCTGTCGGTCCACTGTGAAAGGCGCATCCGATCCAACATCAGCCTTGAAGATCACCATCGAACACCTCATTTTCGAAACGAAACGCGCGAAAGATTCAAGCTTGAAGATTGGGTCATTGAAGTCTCTAGGCGTGTGCAAACAGAACTTCGATGATGCCGTCGACGACCTGCAGAGCAGTCTGGCGTATATGCAGAAAAAAGACATCCCAAGCCTGAAAATCAACCTTTCCGCTGCACTGACTTTCTACTCCACATGTGACGATGCGGTGGTGGAGAGTGGCGACCAAAAGAAAGCTTCCACAGTCTTGAGCAACGACCTTCTGCTGCAACATTTGGCCGCAAATTGCTTGCACTTATCCACTTTGTTGAAGTAA

Coding sequence (CDS)

ATGGGTGAAAAGCATTTGGTTTCTTTCTCAATGGTCTTTCTCCTCGTCGCCGTCTTCATCAGCCAAGCCCAAGGATCAGCCCTCTGTGACGAAGCTGCTTTCCCTGCACTCTGTCGGTCCACTGTGAAAGGCGCATCCGATCCAACATCAGCCTTGAAGATCACCATCGAACACCTCATTTTCGAAACGAAACGCGCGAAAGATTCAAGCTTGAAGATTGGGTCATTGAAGTCTCTAGGCGTGTGCAAACAGAACTTCGATGATGCCGTCGACGACCTGCAGAGCAGTCTGGCGTATATGCAGAAAAAAGACATCCCAAGCCTGAAAATCAACCTTTCCGCTGCACTGACTTTCTACTCCACATGTGACGATGCGGTGGTGGAGAGTGGCGACCAAAAGAAAGCTTCCACAGTCTTGAGCAACGACCTTCTGCTGCAACATTTGGCCGCAAATTGCTTGCACTTATCCACTTTGTTGAAGTAA

Protein sequence

MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK*

Homology

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BLAST of CsaV3_5G031330.1 vs. NCBI nr
Match: XP_004135484.1 (pectinesterase inhibitor 12 [Cucumis sativus] >KGN51780.1 hypothetical protein Csa_009399 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI
Sbjct: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
           FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS
Sbjct: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK
Sbjct: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 160

[Close]

BLAST of CsaV3_5G031330.1 vs. NCBI nr
Match: XP_008446182.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 7.0e-62
Identity = 128/160 (80.00%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           MGE HLVSFSMVFL  AVFI QA GS+LCD+AAFPALCRST+KGASDPTSALK  I+HLI
Sbjct: 1   MGENHLVSFSMVFLFAAVFIGQAHGSSLCDKAAFPALCRSTLKGASDPTSALKNAIKHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
           FET+RAK SSL+IGSLKSL VCKQNFDDA+DDL++SLAYMQKKDI SLKINLSAA+T YS
Sbjct: 61  FETRRAKVSSLRIGSLKSLVVCKQNFDDAIDDLETSLAYMQKKDIASLKINLSAAMTDYS 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAV+ESG+QKKAS VL+ D LL+ LAANCL+L++LLK
Sbjct: 121 TCDDAVIESGEQKKASRVLNTDNLLEQLAANCLYLASLLK 160

[Close]

BLAST of CsaV3_5G031330.1 vs. NCBI nr
Match: KAA0034295.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK15624.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-56
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 11  MVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFETKRAKDSS 70
           MVFL  AVFI QA GS+LCD+AAFPALCRST+KGASDPTSALK  I+HLIFET+RAK SS
Sbjct: 1   MVFLFAAVFIGQAHGSSLCDKAAFPALCRSTLKGASDPTSALKNAIKHLIFETRRAKVSS 60

Query: 71  LKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDAVVESG 130
           L+IGSLKSL VCKQNFDDA+DDL++SLAYMQKKDI SLKINLSAA+T YSTCDDAV+ESG
Sbjct: 61  LRIGSLKSLVVCKQNFDDAIDDLETSLAYMQKKDIASLKINLSAAMTDYSTCDDAVIESG 120

Query: 131 DQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           +QKKAS VL+ D LL+ LAANCL+L++LLK
Sbjct: 121 EQKKASRVLNTDNLLEQLAANCLYLASLLK 150

[Close]

BLAST of CsaV3_5G031330.1 vs. NCBI nr
Match: XP_038893230.1 (pectinesterase inhibitor-like [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           M EKHLVSFS VFL VAVF  QA GS +CD++ +PALCRS VKGASDP SALK  IEHLI
Sbjct: 1   MAEKHLVSFSFVFLAVAVFAGQAHGSTICDKSDYPALCRSAVKGASDPESALKAAIEHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
            ET  AK+SS  +G+LKSL VCKQNF DAVDDLQ SL +++  D+PSLKI+LS ALT YS
Sbjct: 61  SETNHAKESSQTVGNLKSLSVCKQNFKDAVDDLQKSLQHLKNYDLPSLKISLSGALTDYS 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAVV++GD+KKA  VLS D LL+ LA+NCL+L++LL+
Sbjct: 121 TCDDAVVDNGDEKKALGVLSTDALLERLASNCLYLASLLR 160

[Close]

BLAST of CsaV3_5G031330.1 vs. NCBI nr
Match: XP_023551699.1 (pectinesterase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 2.5e-43
Identity = 92/160 (57.50%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           M EKH+V   ++F+  AV   QA G+ +C++A + +LCRS+VKGA++P + L+  IEHLI
Sbjct: 1   MAEKHMV---LLFVAAAVLAGQADGADICEKAEYMSLCRSSVKGATEPAAGLQAAIEHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
            ETK AK+SS+K+G++K L VCKQN+DDAV DLQ S+ Y+ K D PSLKI+LSAALT Y 
Sbjct: 61  LETKHAKESSMKLGAMKCLDVCKQNYDDAVTDLQKSVQYLTKNDKPSLKISLSAALTDYV 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAV+ESG+ KK   ++S D++L+H+AANCLHL++LLK
Sbjct: 121 TCDDAVMESGNSKKVGDLMSVDVVLRHMAANCLHLASLLK 157

[Close]

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL
Match: A0A0A0KQ52 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G599855 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI
Sbjct: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
           FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS
Sbjct: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK
Sbjct: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 160

[Close]

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL
Match: A0A1S3BF99 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103488986 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.4e-62
Identity = 128/160 (80.00%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           MGE HLVSFSMVFL  AVFI QA GS+LCD+AAFPALCRST+KGASDPTSALK  I+HLI
Sbjct: 1   MGENHLVSFSMVFLFAAVFIGQAHGSSLCDKAAFPALCRSTLKGASDPTSALKNAIKHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
           FET+RAK SSL+IGSLKSL VCKQNFDDA+DDL++SLAYMQKKDI SLKINLSAA+T YS
Sbjct: 61  FETRRAKVSSLRIGSLKSLVVCKQNFDDAIDDLETSLAYMQKKDIASLKINLSAAMTDYS 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAV+ESG+QKKAS VL+ D LL+ LAANCL+L++LLK
Sbjct: 121 TCDDAVIESGEQKKASRVLNTDNLLEQLAANCLYLASLLK 160

[Close]

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL
Match: A0A5A7SYM0 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001210 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.5e-57
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 11  MVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFETKRAKDSS 70
           MVFL  AVFI QA GS+LCD+AAFPALCRST+KGASDPTSALK  I+HLIFET+RAK SS
Sbjct: 1   MVFLFAAVFIGQAHGSSLCDKAAFPALCRSTLKGASDPTSALKNAIKHLIFETRRAKVSS 60

Query: 71  LKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDAVVESG 130
           L+IGSLKSL VCKQNFDDA+DDL++SLAYMQKKDI SLKINLSAA+T YSTCDDAV+ESG
Sbjct: 61  LRIGSLKSLVVCKQNFDDAIDDLETSLAYMQKKDIASLKINLSAAMTDYSTCDDAVIESG 120

Query: 131 DQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           +QKKAS VL+ D LL+ LAANCL+L++LLK
Sbjct: 121 EQKKASRVLNTDNLLEQLAANCLYLASLLK 150

[Close]

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL
Match: A0A6J1GYU1 (pectinesterase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458758 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.0e-42
Identity = 91/160 (56.88%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           M EKH+V   ++F+  AV   QA G+ +C++A + +LCRS+VKGA++P + L+  IEHLI
Sbjct: 1   MAEKHMV---LLFVAAAVLAGQADGADICEKAEYASLCRSSVKGATEPAAGLQAAIEHLI 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
            ETK AK+SS+K+G +K L VCKQN++DAV DLQ S+ Y+ K D PSLKI+LSAALT Y 
Sbjct: 61  SETKHAKESSMKLGVMKCLDVCKQNYNDAVTDLQQSVQYLTKNDKPSLKISLSAALTDYV 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAV+ESG+ KK   ++S D++L+H+AANCLHL++LLK
Sbjct: 121 TCDDAVMESGNSKKVGDLMSVDVMLRHMAANCLHLASLLK 157

[Close]

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL
Match: A0A6J1JKG0 (pectinesterase 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485228 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.0e-42
Identity = 90/160 (56.25%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MGEKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLI 60
           M EKH+V   ++F+  AV   QA G+ +C+++ + +LCRS+VKGA++P + L+  IEHL+
Sbjct: 1   MAEKHMV---LLFVAAAVLAGQADGTDICEKSEYASLCRSSVKGATEPAAGLQAAIEHLM 60

Query: 61  FETKRAKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYS 120
            ETK+AK+SS+K+G +K L VCKQN+DDAV DL+ SL Y+   D PSLKI+LSAALT Y 
Sbjct: 61  SETKQAKESSMKLGVMKCLDVCKQNYDDAVTDLEKSLQYLTINDKPSLKISLSAALTDYV 120

Query: 121 TCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           TCDDAV+ESGD KK   ++S D++L+H+AANCLHL++LLK
Sbjct: 121 TCDDAVMESGDSKKVGDLMSIDVVLRHMAANCLHLASLLK 157

[Close]

BLAST of CsaV3_5G031330.1 vs. TAIR 10
Match: AT1G23350.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 62/155 (40.00%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 12  VFLLVAVFISQAQGSAL---CDEAAFPALCRSTVKGASDPTSALKITIEHLIFETKRAKD 71
           +FLL+A   SQA   +L   C  + FPALCRST+KG ++  +A  + I+ L+  T++AK 
Sbjct: 9   IFLLLAATSSQALSISLADPCTVSDFPALCRSTIKGQTNVNAATDVAIKELMKRTRQAKK 68

Query: 72  SSLKIGSLK---SLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDA 131
            + K   LK    +  C  NF+ A D+L+ +L  +++ D  SL INLSAALT Y TC D+
Sbjct: 69  IAEK--ELKRDGGVATCLSNFNSAFDNLEKALTNIKENDGFSLNINLSAALTDYDTCSDS 128

Query: 132 VVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           + E+   K+ + +  +  +L  +A NCL LSTL+K
Sbjct: 129 MKET---KEVNVIYKSAGVLYRMADNCLALSTLVK 158

[Close]

BLAST of CsaV3_5G031330.1 vs. TAIR 10
Match: AT1G70540.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-15
Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 5   HLVSFSMVFLLVA--VFISQAQ-----GSALCDEAAFPALCRSTVKGASDPTSALKITIE 64
           HL +  ++ LL A    ++ AQ     G   C  + F  LCRS VKG  +  +A +++I 
Sbjct: 6   HLATAVILLLLTASQSGVAMAQRVMGGGRDPCSVSDFKVLCRSVVKGQKNVNAATEVSIR 65

Query: 65  HLIFETKRAKDSS-LKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAAL 124
            L+  T +AK+++ +   S   L  C  N+D A+++LQ +L  +++ D  SL INLSA+L
Sbjct: 66  ELMKRTIKAKEAAKISRKSGGGLKTCYSNYDSALENLQKALKNIKQNDGFSLNINLSASL 125

Query: 125 TFYSTCDDAVVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
           T + TC+DA+   G    ++    +   L  +A NCL LSTL+K
Sbjct: 126 TDFDTCNDAM---GGGTASNVFAKSTSTLHEMADNCLALSTLVK 166

[Close]

BLAST of CsaV3_5G031330.1 vs. TAIR 10
Match: AT1G10770.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-13
Identity = 45/155 (29.03%), Postives = 92/155 (59.35%), Query Frame = 0


Query: 8   SFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFETK--R 67
           S +++  L+A  +++++   +C   A+P+LCR  VK  + P  A   TI+ L  +TK   
Sbjct: 17  SAAVLIFLMAGQVAESRMINICSHTAYPSLCRPLVKRVTSPRKATHRTIQALEAKTKLAL 76

Query: 68  AKDSSLKIGSLKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDA 127
           A+ +  K G+ +++  C +   DAV +L S+   ++K+D+P++   L+AA++ Y  C D 
Sbjct: 77  AETARFKNGN-QAVSTCYETLGDAVYNLASARKSIRKRDVPAMNTYLTAAVSDYGACVDG 136

Query: 128 VVESGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
            +E+   ++ + + +  + L+ +++NCL LSTL++
Sbjct: 137 FIET---QQVNAIQNAVVDLRKISSNCLALSTLIR 167

[Close]

BLAST of CsaV3_5G031330.1 vs. TAIR 10
Match: AT3G36659.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 28  LCDEAAFPALCRSTVKGASDP------TSALKITIEHLIFETKRAKDSSLKIGSLKSLGV 87
           +C +   P LC S+V     P      +S L + I+  I  TK A     K+ +      
Sbjct: 133 ICGKTDNPPLCESSVSPLLTPQLKPNTSSVLILAIQASITATKAAMAIVEKVDA----SD 192

Query: 88  CKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDAVVESGDQKKASTVLSN 147
           C++ +DDAV +L+ ++  ++  DI ++  NLSAA+T YSTC+D   ESG+    + V   
Sbjct: 193 CQELYDDAVVNLEDAVNAVKSSDIATVNTNLSAAMTDYSTCNDGFEESGEPNPLAYVADK 252

Query: 148 DLLLQHLAANCLHLSTLLK 161
              L  + +NCL +STL+K
Sbjct: 253 ---LTKMVSNCLAISTLIK 264

[Close]

BLAST of CsaV3_5G031330.1 vs. TAIR 10
Match: AT1G60760.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 46/152 (30.26%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 10  SMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFETKRAKDS 69
           ++V LL A   ++A+ ++LC + A+P LCR  VKG  +P  A   TI  L  +TK A   
Sbjct: 16  AIVILLAASQATEARFTSLCAQTAYPTLCRPLVKG-PNPRRATHSTIRALEAKTKLAITD 75

Query: 70  SLKIGS-LKSLGVCKQNFDDAVDDLQSSLAYMQKKDIPSLKINLSAALTFYSTCDDAVVE 129
           S +  S   ++ +C     DA  +L+ +   ++K+++  LK+ L+AA++ Y  C +  + 
Sbjct: 76  SARFKSGNPTVAICYATLVDASFNLRRARTSIRKRNVMMLKMFLTAAVSDYGVCVNGFI- 135

Query: 130 SGDQKKASTVLSNDLLLQHLAANCLHLSTLLK 161
             D  + +T+ ++   L+ +  NCL L+TL++
Sbjct: 136 --DSHQVNTLQNDVDELRKMGTNCLLLATLIR 163

The following BLAST results are available for this feature:

BLAST of CsaV3_5G031330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135484.1	3.7e-79	100.00	pectinesterase inhibitor 12 [Cucumis sativus] >KGN51780.1 hypothetical protein C...	[more]
XP_008446182.1	7.0e-62	80.00	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
KAA0034295.1	2.0e-56	79.33	pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK15624.1 pectinester...	[more]
XP_038893230.1	2.5e-51	68.13	pectinesterase inhibitor-like [Benincasa hispida]	[more]
XP_023551699.1	2.5e-43	57.50	pectinesterase 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G031330.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G031330.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ52	1.8e-79	100.00	PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G599855 PE=4 S...	[more]
A0A1S3BF99	3.4e-62	80.00	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103488986 PE=4 SV=1	[more]
A0A5A7SYM0	9.5e-57	79.33	Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1GYU1	1.0e-42	56.88	pectinesterase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111458758 PE=4 SV=1	[more]
A0A6J1JKG0	3.0e-42	56.25	pectinesterase 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485228 PE=4 SV=1	[more]

BLAST of CsaV3_5G031330.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23350.1	2.0e-19	40.00	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT1G70540.1	6.8e-15	34.76	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT1G10770.1	6.4e-13	29.03	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT3G36659.1	2.0e-11	33.09	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]
AT1G60760.1	2.3e-10	30.26	Plant invertase/pectin methylesterase inhibitor superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 20..155 e-value: 6.0E-16 score: 69.0
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 27..154 e-value: 6.6E-15 score: 55.7
IPR006501	Pectinesterase inhibitor domain	TIGRFAM	TIGR01614	TIGR01614	coord: 10..157 e-value: 1.2E-11 score: 42.3
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	1.20.140.40	Invertase/pectin methylesterase inhibitor family protein	coord: 21..160 e-value: 2.1E-17 score: 65.5
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 27..159
None	No IPR available	PANTHER	PTHR31080:SF245	INVERTASE INHIBITOR-RELATED	coord: 10..156
None	No IPR available	PANTHER	PTHR31080	PECTINESTERASE INHIBITOR-LIKE	coord: 10..156
None	No IPR available	CDD	cd15800	PMEI-like_2	coord: 22..159 e-value: 5.85087E-38 score: 125.165

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_5G031330	CsaV3_5G031330	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G031330.1.exon1	CsaV3_5G031330.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G031330.1.cds1	CsaV3_5G031330.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G031330.1	CsaV3_5G031330.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004857	enzyme inhibitor activity