CsaV3_5G000110.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G000110.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NDR1/HIN1-like protein
Location	chr5: 62153 .. 62791 (+)
Sequence length	639
RNA-Seq Expression	CsaV3_5G000110.1
Synteny	CsaV3_5G000110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTAGCACACGTGAAATCCCCCAAACACTGTGCCAATAAGCAAGAAGTGAAGGTTCAAAAGCGCTACAAGAAGCTGTTCCTTGGAGTATCGGCATTTTTATCCACCATTTCCTTGCTGATACTGCTTCTCTGGCTCATCCTGCGTCCCTCGAAGCCAGAATTCAGGGTGAAACAGGCAGATGTGTATCAGCTGAACCTCATAGACGACCTTCACCTCCTCAACTCATCCATCCAACTCACTCTCTCCTCAAAAAACCCCAATCACAGGTTGGGAATATACTACGACAACCTTCAAGTGTACGCCGTTTATAAGGGGCAACAGATAACTCTCCCTACCTCTTTACCTCCTTTCTACCAGGGCTATCAAGAAGGTAATTTGCTCACCGCTTTCTTGGCGGGCAGCCGCGTACCGGTGGCTCCTTCCTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTCAATCTCAAAGCCATGGGAAGGCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTATCGGTTTAATGTGAATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACGCCTCCACTCACCCTAAACCAACCAGCTCGCTGCTCTACAACCCTTTAA

mRNA sequence

ATGTCTCTAGCACACGTGAAATCCCCCAAACACTGTGCCAATAAGCAAGAAGTGAAGGTTCAAAAGCGCTACAAGAAGCTGTTCCTTGGAGTATCGGCATTTTTATCCACCATTTCCTTGCTGATACTGCTTCTCTGGCTCATCCTGCGTCCCTCGAAGCCAGAATTCAGGGTGAAACAGGCAGATGTGTATCAGCTGAACCTCATAGACGACCTTCACCTCCTCAACTCATCCATCCAACTCACTCTCTCCTCAAAAAACCCCAATCACAGGTTGGGAATATACTACGACAACCTTCAAGTGTACGCCGTTTATAAGGGGCAACAGATAACTCTCCCTACCTCTTTACCTCCTTTCTACCAGGGCTATCAAGAAGGTAATTTGCTCACCGCTTTCTTGGCGGGCAGCCGCGTACCGGTGGCTCCTTCCTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTCAATCTCAAAGCCATGGGAAGGCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTATCGGTTTAATGTGAATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACGCCTCCACTCACCCTAAACCAACCAGCTCGCTGCTCTACAACCCTTTAA

Coding sequence (CDS)

ATGTCTCTAGCACACGTGAAATCCCCCAAACACTGTGCCAATAAGCAAGAAGTGAAGGTTCAAAAGCGCTACAAGAAGCTGTTCCTTGGAGTATCGGCATTTTTATCCACCATTTCCTTGCTGATACTGCTTCTCTGGCTCATCCTGCGTCCCTCGAAGCCAGAATTCAGGGTGAAACAGGCAGATGTGTATCAGCTGAACCTCATAGACGACCTTCACCTCCTCAACTCATCCATCCAACTCACTCTCTCCTCAAAAAACCCCAATCACAGGTTGGGAATATACTACGACAACCTTCAAGTGTACGCCGTTTATAAGGGGCAACAGATAACTCTCCCTACCTCTTTACCTCCTTTCTACCAGGGCTATCAAGAAGGTAATTTGCTCACCGCTTTCTTGGCGGGCAGCCGCGTACCGGTGGCTCCTTCCTTTGGATATGAAGTAGGACGGGATCAGTCGGCGGGGCGGTTCGTGCTCAATCTCAAAGCCATGGGAAGGCTCCGATGGAAGGTGGGGAGTTGGGTTTCTGGAGGCTATCGGTTTAATGTGAATTGTGTTGCGGTGATGCCGTTTGGGCCTACGCTCCCCACGCCTCCACTCACCCTAAACCAACCAGCTCGCTGCTCTACAACCCTTTAA

Protein sequence

MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL*

Homology

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BLAST of CsaV3_5G000110.1 vs. NCBI nr
Match: XP_004145957.1 (NDR1/HIN1-like protein 26 [Cucumis sativus] >KGN49822.1 hypothetical protein Csa_000220 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 1.7e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

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BLAST of CsaV3_5G000110.1 vs. NCBI nr
Match: KAA0042516.1 (NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK05919.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQE NLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

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BLAST of CsaV3_5G000110.1 vs. NCBI nr
Match: XP_008437662.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114
Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSA LSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQE NLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

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BLAST of CsaV3_5G000110.1 vs. NCBI nr
Match: XP_038906799.1 (NDR1/HIN1-like protein 26 [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 196/212 (92.45%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQE+KV KRYKKLFLGVSAFLSTISLLILLLWLIL PSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQELKVHKRYKKLFLGVSAFLSTISLLILLLWLILHPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPNHR+GIYYD+LQVYA YKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNHRVGIYYDHLQVYAAYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           Q YQ+ NLLTAFLAGS VPVAPSFGYEVG+DQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QAYQDSNLLTAFLAGSSVPVAPSFGYEVGKDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNV+CVAVMPFGPTLP PPLTLN P RCSTTL
Sbjct: 181 FNVDCVAVMPFGPTLPMPPLTLNHPTRCSTTL 211

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BLAST of CsaV3_5G000110.1 vs. NCBI nr
Match: XP_023533460.1 (NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-like protein 26, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94
Identity = 177/212 (83.49%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MS   VKSPKHCANKQ++K+ KRYKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNV+CVAVMPFGPTLPT PLTL+QP RCSTTL
Sbjct: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

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BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68
Identity = 121/213 (56.81%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MS   + SPKHCA K  + +  R+KKLF   S F S + L+I L+WLIL P +PEF + +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNL-IDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN ++GIYYD L VYA Y+GQQIT   SLPPF
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGY 180
           YQ ++E NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           RFNVNC+A++ FG  + TPPL   Q  RCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

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BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.1e-39
Identity = 81/184 (44.02%), Postives = 123/184 (66.85%), Query Frame = 0


Query: 10  KHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLI 69
           K C N    + +K  +++F  +   L  I L ILL+W IL+PSKP F ++ A VY  N+ 
Sbjct: 2   KDCENHGHSR-RKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVS 61

Query: 70  -DDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNL 129
            +  +LL S+ Q+TLSS+NPN+++GIYYD L VYA Y+ QQIT PTS+PP YQG+++ ++
Sbjct: 62  GNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDI 121

Query: 130 LTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAV 189
            + F+ G+ VP+AP  G  +  D+  G  +L ++A GR+RWKVG++++G Y  +V C A 
Sbjct: 122 WSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAY 181

Query: 190 MPFG 193
           + FG
Sbjct: 182 INFG 184

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BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.8e-35
Identity = 70/157 (44.59%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 31  VSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLIDDLHLLNSSIQLTLSSKNPNH 90
           +  F+  + + I L+W+IL+P+KP F ++ A VY  NL    +LL S+ Q+T++S+N N 
Sbjct: 25  IIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL-SQPNLLTSNFQITIASRNRNS 84

Query: 91  RLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSRVPVAPSFGYEVGR 150
           R+GIYYD L VYA Y+ QQITL T++PP YQG++E N+ + F+ G+ VP+AP     +G 
Sbjct: 85  RIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGD 144

Query: 151 DQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVA 188
           +Q+ G   L ++A GR+RWKVG+ ++G Y  +V C A
Sbjct: 145 EQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

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BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 51/187 (27.27%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 27  LFLGVSAFLSTISLL---ILLLWLILRPSKPEFRVKQADVYQLNLIDDLHLLNSSIQLTL 86
           L L V   +S I +L    L+ WLI+RP   +F V  A + + +     ++L  ++ LT+
Sbjct: 38  LSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTV 97

Query: 87  SSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSRVPV-AP 146
             +NPN R+G+YYD ++ +A Y+G++ +  T L PFYQG++   +LT    G  + +   
Sbjct: 98  PVRNPNKRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNA 157

Query: 147 SFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAV-MPFGPTLPTPPLT 206
                +  ++ +G + + +K   R+R+K+G       +  V+C  + +P   +  T   +
Sbjct: 158 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 217

Query: 207 LNQPARC 209
              P +C
Sbjct: 218 TVFPIKC 223

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BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-12
Identity = 47/179 (26.26%), Postives = 92/179 (51.40%), Query Frame = 0


Query: 35  LSTISLLI----LLLWLILRPSKPEFRVKQADVYQLNLIDDLHLLNSSIQLTLSSKNPNH 94
           L TI++L+    L++WLI RP+  +F V  A + +  L D  + L  ++ L  + +NPN 
Sbjct: 52  LITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTL-DPTNNLRYNLDLNFTIRNPNR 111

Query: 95  RLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSR-VPVAPSFGYEVG 154
           R+G+YYD ++V   Y  Q+  +  ++  FYQG++   ++   L G + V +      ++ 
Sbjct: 112 RIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLN 171

Query: 155 RDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAVMPFGPTLPTPPLTLNQPARC 209
            D ++  + ++ K   ++R+K G   S  ++  + C   +P   T  +    + QP +C
Sbjct: 172 EDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPL--TSNSTSGFVFQPTKC 227

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BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL
Match: A0A0A0KN27 (NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 8.3e-117
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 212

[Close]

BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL
Match: A0A5D3C6B2 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00100 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQE NLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL
Match: A0A1S3AUK3 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 5.9e-115
Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSA LSTISLLILLLWLILRPSKPEFRVKQ
Sbjct: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAILSTISLLILLLWLILRPSKPEFRVKQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY
Sbjct: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QGYQE NLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR
Sbjct: 121 QGYQEANLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNVNCVAVMPFGPTLPTPPLTLNQP RCSTTL
Sbjct: 181 FNVNCVAVMPFGPTLPTPPLTLNQPTRCSTTL 212

[Close]

BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL
Match: A0A6J1K8N8 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 177/212 (83.49%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MS   VKSPKHCANKQ++K+ KRYKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKRYKKLFLAASATLSTISLLILLLWLILRPSKPEFALRQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNKKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNV+CVAVMPFGPTLPT PLTL+QP RCSTTL
Sbjct: 181 FNVDCVAVMPFGPTLPTAPLTLSQPTRCSTTL 211

[Close]

BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL
Match: A0A6J1H101 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 176/212 (83.02%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MS   VKSPKHCANKQ++K+ K YKKLFL  SA LSTISLLILLLWLILRPSKPEF ++Q
Sbjct: 1   MSREDVKSPKHCANKQQLKLDKHYKKLFLAASATLSTISLLILLLWLILRPSKPEFDLRQ 60

Query: 61  ADVYQLNLIDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFY 120
           ADVYQLNLI DLHLLNSSIQLTLSSKNPN ++GI+YD LQVYA YKGQQIT+ TSLP FY
Sbjct: 61  ADVYQLNLI-DLHLLNSSIQLTLSSKNPNQKMGIFYDQLQVYAAYKGQQITMGTSLPGFY 120

Query: 121 QGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYR 180
           QG +E NLLTAFLAGS VPVAPSFGYEVGRDQSAGRFVL +KAMGRLRWK+GSWVSG YR
Sbjct: 121 QGQEESNLLTAFLAGSSVPVAPSFGYEVGRDQSAGRFVLKIKAMGRLRWKLGSWVSGRYR 180

Query: 181 FNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           FNV+CVAVMPFGPTLPT PLTL QP RCSTTL
Sbjct: 181 FNVDCVAVMPFGPTLPTAPLTLTQPTRCSTTL 211

[Close]

BLAST of CsaV3_5G000110.1 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 260.0 bits (663), Expect = 1.7e-69
Identity = 121/213 (56.81%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 1   MSLAHVKSPKHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQ 60
           MS   + SPKHCA K  + +  R+KKLF   S F S + L+I L+WLIL P +PEF + +
Sbjct: 1   MSQISITSPKHCAKKGGININNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTE 60

Query: 61  ADVYQLNL-IDDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPF 120
           AD+Y LNL     HLLNSS+QLTL SKNPN ++GIYYD L VYA Y+GQQIT   SLPPF
Sbjct: 61  ADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPF 120

Query: 121 YQGYQEGNLLTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGY 180
           YQ ++E NLLTAFL G+ +PVA SFGY++ R++S G+ ++ +K  G+LRWK+G+WVSG Y
Sbjct: 121 YQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAY 180

Query: 181 RFNVNCVAVMPFGPTLPTPPLTLNQPARCSTTL 213
           RFNVNC+A++ FG  + TPPL   Q  RCSTT+
Sbjct: 181 RFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of CsaV3_5G000110.1 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-40
Identity = 81/184 (44.02%), Postives = 123/184 (66.85%), Query Frame = 0


Query: 10  KHCANKQEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLI 69
           K C N    + +K  +++F  +   L  I L ILL+W IL+PSKP F ++ A VY  N+ 
Sbjct: 2   KDCENHGHSR-RKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVS 61

Query: 70  -DDLHLLNSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNL 129
            +  +LL S+ Q+TLSS+NPN+++GIYYD L VYA Y+ QQIT PTS+PP YQG+++ ++
Sbjct: 62  GNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDI 121

Query: 130 LTAFLAGSRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAV 189
            + F+ G+ VP+AP  G  +  D+  G  +L ++A GR+RWKVG++++G Y  +V C A 
Sbjct: 122 WSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAY 181

Query: 190 MPFG 193
           + FG
Sbjct: 182 INFG 184

[Close]

BLAST of CsaV3_5G000110.1 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 77/172 (44.77%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 16  QEVKVQKRYKKLFLGVSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLIDDLHLL 75
           ++ K++KR   L LG   FL+ +  ++ L+W IL P  P F ++ A +Y  N +   + L
Sbjct: 12  EDEKMRKRIGALVLG---FLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFN-VSQPNYL 71

Query: 76  NSSIQLTLSSKNPNHRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAG 135
            S++Q+TLSS+NPN ++GI+YD L +YA Y+ QQ+TL T LP  YQG+ +  + + FL G
Sbjct: 72  TSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYG 131

Query: 136 SRVPVAPSFGYEVGRDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVA 188
           + VPVAP F   + +D +AG  +LN+K  G +RWKVG+WVSG YR +VNC A
Sbjct: 132 TTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPA 179

[Close]

BLAST of CsaV3_5G000110.1 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-37
Identity = 76/163 (46.63%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 31  VSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLI-DDLHLLNSSIQLTLSSKNPN 90
           +S  L  I ++ILL+W IL+PSKP F ++ A V+  N+  +  +LL S+ Q TLSS+NPN
Sbjct: 24  ISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPN 83

Query: 91  HRLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSRVPVAPSFGYEVG 150
            ++GIYYD L VYA Y+ QQITLP+ +   YQG++E N+ + F+ G  VPVAP   + + 
Sbjct: 84  DKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYSVPVAPYNAFYLD 143

Query: 151 RDQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVAVMPFG 193
           +D S+G  +L L   GR+RWKVGS+++G Y  +V C A++ FG
Sbjct: 144 QDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFG 186

[Close]

BLAST of CsaV3_5G000110.1 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-36
Identity = 70/157 (44.59%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 31  VSAFLSTISLLILLLWLILRPSKPEFRVKQADVYQLNLIDDLHLLNSSIQLTLSSKNPNH 90
           +  F+  + + I L+W+IL+P+KP F ++ A VY  NL    +LL S+ Q+T++S+N N 
Sbjct: 25  IIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL-SQPNLLTSNFQITIASRNRNS 84

Query: 91  RLGIYYDNLQVYAVYKGQQITLPTSLPPFYQGYQEGNLLTAFLAGSRVPVAPSFGYEVGR 150
           R+GIYYD L VYA Y+ QQITL T++PP YQG++E N+ + F+ G+ VP+AP     +G 
Sbjct: 85  RIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGD 144

Query: 151 DQSAGRFVLNLKAMGRLRWKVGSWVSGGYRFNVNCVA 188
           +Q+ G   L ++A GR+RWKVG+ ++G Y  +V C A
Sbjct: 145 EQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

The following BLAST results are available for this feature:

BLAST of CsaV3_5G000110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145957.1	1.7e-116	100.00	NDR1/HIN1-like protein 26 [Cucumis sativus] >KGN49822.1 hypothetical protein Csa...	[more]
KAA0042516.1	2.5e-115	99.06	NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK05919.1 NDR1/HIN1-like ...	[more]
XP_008437662.1	1.2e-114	98.58	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]
XP_038906799.1	2.1e-106	92.45	NDR1/HIN1-like protein 26 [Benincasa hispida]	[more]
XP_023533460.1	4.1e-94	83.49	NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6605814.1 NDR1/HIN1-l...	[more]

BLAST of CsaV3_5G000110.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	2.4e-68	56.81	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SRN0	5.1e-39	44.02	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	5.8e-35	44.59	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SJ52	2.2e-13	27.27	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	7.0e-12	26.26	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of CsaV3_5G000110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN27	8.3e-117	100.00	NDR1/HIN1-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G139020 PE=4 SV=1	[more]
A0A5D3C6B2	1.2e-115	99.06	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AUK3	5.9e-115	98.58	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103483002 PE=4 SV=1	[more]
A0A6J1K8N8	2.6e-94	83.49	NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111491649 PE=4 SV=1	[more]
A0A6J1H101	1.3e-93	83.02	NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111459163 PE=4 SV=...	[more]

BLAST of CsaV3_5G000110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53730.1	1.7e-69	56.81	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	3.6e-40	44.02	NDR1/HIN1-like 1	[more]
AT3G44220.1	2.0e-38	44.77	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	3.8e-37	46.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	4.2e-36	44.59	NDR1/HIN1-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 82..185 e-value: 4.7E-8 score: 33.5
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 11..211
None	No IPR available	PANTHER	PTHR31415:SF133	BNAA02G10130D PROTEIN	coord: 11..211

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_5G000110	CsaV3_5G000110	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G000110.1.exon1	CsaV3_5G000110.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G000110.1.cds1	CsaV3_5G000110.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_5G000110.1	CsaV3_5G000110.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism