
CsaV3_4G036570.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGAACCAATAATTGATAAAGAACTCAACGGTACACATTTAAATTGGAAAATTCCGCGTGGGGCCCTTTCGCTCCCATTACTTCGCCCAATCACGCCGCGCCACATCATCCCACCGCCGGCAACGCCGGCCGGTTCACCCACTCCGTCACCATCCACTTCTCTTCTTCCTCATCAATCCATTTTTTTAACTAAGGTTAAAAGTCATTTCTCCTTTCGCTTTACCAATAATTCACCGTTTCAGAGCTTTTCCCGTGTGCTTTCGGTCCTTCTTCTCCACAGCCACAAGTTTTCGAGCGCTGACATTTATCCTAATTCTCTCGTATTTCGATCTTCTTTGACTTGCAGAGCAAATTAGCTAGGGAGTTGAATTGAATCGAGCAGGTCAGCCGTTTTATTTGTTAATCTATTTCAACCCTTTCATGCCGTCCTTTTCATTCATTGCGACTTGTGAACGCCATTCATTTTGAGGCGTGGACTTTCCTTGTTTACTTGTTGGGTTTTAATGATAATTTGAGATTTCAACCTGCTTTTTTTGGTAGTATTTATAGTATACGTTCGTTTATTTGTATTTATAACTTTGGCTTTTCGTTGTTTCATCATTGAGGCTGACAATTTTGTCTTTGACCATGTTGTTTCTTTGCCTATTTCTTTTGGTATTGCCTGGAGAAGCTATGGCGAATGTTAATTGTAACCCGAATTCGGCTTCTGATACATTGACACTTGATGGGATTAGAGATTCTTTGATAAGACAGGAGGATTCTATTGTTTTTAGTCTCATTGAGAGAGCTAGGTTCCCTCTCAATGGGAAGATGTACCTTCATAATCATGCTTCAATTCCTGGATTTTCTGGTTCTTTGGTTGAGTTCATTGTGAGAGAAACTGAGGACGTTCAAGCTAAGGTAAGTTTATGTTTGTTCGTTTGAGATATATGGTTGCTTTGCCATTGCTTATCATTTTTCTTTGAAGCCCTTCAACATACTTTCTAATATTCCAATGCTTCTTTCAAATGTTTTCTGAAACCATTTCTTCGAAACTTGGTTGTGAGATTGCCCAATTGCGGGTTTCACAATGCTATTTTGATTTGGCTGACTTGCTTGTGTGAGTAGAAGCAAGTGTTGTATAATCACTCTTTGAAGTTTGTTGAAACACAATTGTGAAAGTGGATTGAAATCTTGATCTTCGTAGGTTAAATTAGTGGTATAATTAAATTTATAGCTAGCCATCGGCCTAAGCTTATAGGTAGATTGGTGATTTACATAACATAAGATCAAACAATTTTGTGTTTGAACTCGTGTAGTGTCATTTCGTCTCAAATCTTTAACCCTGTATGTGAGAATATGTTTAGAGTATCCATATGTATAAATTTTTTGCAACCAATAAACTTAAGCTTTTGGATATAAATAGGAGATTAAACAAAGTGGCTAAACCGATTAGTTGAAGGACATGTTCTATATCTCTTTCTTCGATCAATGTTCTGTTCCTGTAATTGTTAGATGCAGGTGAGGCTAGACCATTATTTTGAATAACGAAACCTATTGTATATAAATGGCTGTAACGAATGAAATCTAAATCCCATTTGGCTGATGTCATTTTCTCTATTAGCTGCTTAGAAATTATATAGTTGAAATCCTTGCTACAGGCTCTCATTACCTCCTGCATCCTAATCTTAATGGGAAGAATTTCAAATATTGGTTACATAGGGATATAATACCACAAAACCATCGTAGATCGGCCTAATAGTAAATAAAAAAATGTGTTTGTTGAACGAGTAAGATGGAATGAGGTCAATCCACAGTGATTACCTACATAGGATTAATCCATATATTTGTAGAGTCAAATAGATGATCCCGTGATATTAGTAAAGGTGCTCTTAAGCTGGCTAGACATTCCCTCACATGTGTATATATATAATAATACAAGAGAACAGTTCCAATCTGGGATGTTTTCTTCTTGGTTCATCGTTACTTTTTCAGTTGGATTTGAGATTCTCGTTCAGGTTGAAAGTTTTTTCTTCCGATTAACTGTTTGGATTTTTGTCAACAGGCTGGTAGATATGAGAATCCTGAAGAAAATCCGTTCTTCCCAGAAAATTTGCCTCGTCCTTTGGTGCACCCTCACAAGTATCCAAAGGTGAGAGACTGTCTAATAAGGTTCCATTGTTGCCTTCGAATTTGTAGGATATTAATCCAAGGTTTCAGGTTCTGCATCCTTCAGGCGCTTCAATTAATATGAACAAAGCCATATGGGATTTCTATTTCAAAGAATTCTTACCATTGTTGGTTTCTGATGGCGACGATGGAAATTATGCAGCAACTGCTGCCAGTGATCTTGCTTGTTTGCAGGTAAAGACAATGTGTAAACTTGTCCCTTGTGTTAGGTTCTTTATGCTAATACAACTGTGTTGATTCCTTGTATGAAATGTCTTGTTAGCTATGCTAACTCACATTATTTCTTACACGTATAACAACCCACGATCAATCTCAGGCACTTTCAAGGAGGATTCACTGTGGAAAATACGTAGCTGAGGTGAAATTTAGGGACGCCCCCAATGAATACGAGGGTCCAATTCGTTCTCAGGTATTGTAAATATATTTTGGAAATGCATGATTGTTAGGCTGTCATTTGACTCTTTTCCTTGGTGAAATGATAAAGGACCTTCAGTCCTGCCAAGAGTATGGTCTGTTTGAATAATCATTGACATTTGAGATACAGTATAAGCGGAGGGGTTTGATAAAAACAAGTTAATTTACTGCTTTTTTCAGGAAAGAGACACTTTGATGGAGCTATTAACATTTAAGGCAGTGGAAGAGCAGGTGAAGAAGAGAGTAGAGAAGAAGGCTATGGTGTTTGGGCAAGAAGTAACCCTCAACAACACAAGTGGAGGAGGAAAGCATAAGATTGATCCATCCCTTGCCTCTCTCCTTTACGACAAATGGGTAATGCCACTCACCAAGGAAGTTGAAGTTGAATACCTTTTACGTCGTCTTGAATAAATCTATCTAAGAACTATATGTAATGATCAAAATGAACAAGAATTTTATCGTATGATCATTTATCACTTCTTTTGAAATCTCCACGTCGTCAATCTTTTGAAATGCCTTAGTCAATTTTGATCCCACAACTATATGTAATGCATTACATCTTTAAATGCTTTACTATATGTAATGCATTAAAAGATGTAATGCTGCATCAAATTTTCATCCCACAACTATATGTAATGCATTCCAATACATCTCTAG ATGGCGAATGTTAATTGTAACCCGAATTCGGCTTCTGATACATTGACACTTGATGGGATTAGAGATTCTTTGATAAGACAGGAGGATTCTATTGTTTTTAGTCTCATTGAGAGAGCTAGGTTCCCTCTCAATGGGAAGATGTACCTTCATAATCATGCTTCAATTCCTGGATTTTCTGGTTCTTTGGTTGAGTTCATTGTGAGAGAAACTGAGGACGTTCAAGCTAAGGCTGGTAGATATGAGAATCCTGAAGAAAATCCGTTCTTCCCAGAAAATTTGCCTCGTCCTTTGGTGCACCCTCACAAGTATCCAAAGGTTCTGCATCCTTCAGGCGCTTCAATTAATATGAACAAAGCCATATGGGATTTCTATTTCAAAGAATTCTTACCATTGTTGGTTTCTGATGGCGACGATGGAAATTATGCAGCAACTGCTGCCAGTGATCTTGCTTGTTTGCAGGCACTTTCAAGGAGGATTCACTGTGGAAAATACGTAGCTGAGGTGAAATTTAGGGACGCCCCCAATGAATACGAGGGTCCAATTCGTTCTCAGGAAAGAGACACTTTGATGGAGCTATTAACATTTAAGGCAGTGGAAGAGCAGGTGAAGAAGAGAGTAGAGAAGAAGGCTATGGTGTTTGGGCAAGAAGTAACCCTCAACAACACAAGTGGAGGAGGAAAGCATAAGATTGATCCATCCCTTGCCTCTCTCCTTTACGACAAATGGGTAATGCCACTCACCAAGGAAGTTGAAGTTGAATACCTTTTACGTCGTCTTGAATAA ATGGCGAATGTTAATTGTAACCCGAATTCGGCTTCTGATACATTGACACTTGATGGGATTAGAGATTCTTTGATAAGACAGGAGGATTCTATTGTTTTTAGTCTCATTGAGAGAGCTAGGTTCCCTCTCAATGGGAAGATGTACCTTCATAATCATGCTTCAATTCCTGGATTTTCTGGTTCTTTGGTTGAGTTCATTGTGAGAGAAACTGAGGACGTTCAAGCTAAGGCTGGTAGATATGAGAATCCTGAAGAAAATCCGTTCTTCCCAGAAAATTTGCCTCGTCCTTTGGTGCACCCTCACAAGTATCCAAAGGTTCTGCATCCTTCAGGCGCTTCAATTAATATGAACAAAGCCATATGGGATTTCTATTTCAAAGAATTCTTACCATTGTTGGTTTCTGATGGCGACGATGGAAATTATGCAGCAACTGCTGCCAGTGATCTTGCTTGTTTGCAGGCACTTTCAAGGAGGATTCACTGTGGAAAATACGTAGCTGAGGTGAAATTTAGGGACGCCCCCAATGAATACGAGGGTCCAATTCGTTCTCAGGAAAGAGACACTTTGATGGAGCTATTAACATTTAAGGCAGTGGAAGAGCAGGTGAAGAAGAGAGTAGAGAAGAAGGCTATGGTGTTTGGGCAAGAAGTAACCCTCAACAACACAAGTGGAGGAGGAAAGCATAAGATTGATCCATCCCTTGCCTCTCTCCTTTACGACAAATGGGTAATGCCACTCACCAAGGAAGTTGAAGTTGAATACCTTTTACGTCGTCTTGAATAA MANVNCNPNSASDTLTLDGIRDSLIRQEDSIVFSLIERARFPLNGKMYLHNHASIPGFSGSLVEFIVRETEDVQAKAGRYENPEENPFFPENLPRPLVHPHKYPKVLHPSGASINMNKAIWDFYFKEFLPLLVSDGDDGNYAATAASDLACLQALSRRIHCGKYVAEVKFRDAPNEYEGPIRSQERDTLMELLTFKAVEEQVKKRVEKKAMVFGQEVTLNNTSGGGKHKIDPSLASLLYDKWVMPLTKEVEVEYLLRRLE* Homology
BLAST of CsaV3_4G036570.1 vs. NCBI nr
Match: XP_004145501.1 (chorismate mutase 2 [Cucumis sativus] >XP_031740018.1 chorismate mutase 2 [Cucumis sativus] >XP_031740019.1 chorismate mutase 2 [Cucumis sativus] >KGN55430.1 hypothetical protein Csa_012843 [Cucumis sativus]) HSP 1 Score: 528.5 bits (1360), Expect = 3.3e-146 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. NCBI nr
Match: XP_008452851.1 (PREDICTED: chorismate mutase 2 isoform X1 [Cucumis melo]) HSP 1 Score: 511.5 bits (1316), Expect = 4.2e-141 Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. NCBI nr
Match: XP_008452852.1 (PREDICTED: chorismate mutase 2 isoform X2 [Cucumis melo] >XP_008452853.1 PREDICTED: chorismate mutase 2 isoform X2 [Cucumis melo] >KAA0064583.1 chorismate mutase 2 isoform X2 [Cucumis melo var. makuwa] >TYK20007.1 chorismate mutase 2 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 511.5 bits (1316), Expect = 4.2e-141 Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. NCBI nr
Match: XP_038896104.1 (chorismate mutase 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 493.8 bits (1270), Expect = 9.0e-136 Identity = 242/259 (93.44%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. NCBI nr
Match: XP_038896105.1 (chorismate mutase 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 493.8 bits (1270), Expect = 9.0e-136 Identity = 242/259 (93.44%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy Swiss-Prot
Match: Q9S7H4 (Chorismate mutase 2 OS=Arabidopsis thaliana OX=3702 GN=CM2 PE=1 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.1e-87 Identity = 163/255 (63.92%), Postives = 193/255 (75.69%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy Swiss-Prot
Match: D2CSU5 (Chorismate mutase 2 OS=Petunia hybrida OX=4102 GN=CM2 PE=1 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 2.8e-79 Identity = 148/249 (59.44%), Postives = 187/249 (75.10%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy Swiss-Prot
Match: D2CSU4 (Chorismate mutase 1, chloroplastic OS=Petunia hybrida OX=4102 GN=CM1 PE=1 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.1e-78 Identity = 143/258 (55.43%), Postives = 190/258 (73.64%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy Swiss-Prot
Match: B4FUP5 (Chorismate mutase 2, cytosolic OS=Zea mays OX=4577 GN=CM2 PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 8.9e-78 Identity = 150/253 (59.29%), Postives = 184/253 (72.73%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy Swiss-Prot
Match: Q9C544 (Chorismate mutase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CM3 PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.6e-74 Identity = 138/251 (54.98%), Postives = 183/251 (72.91%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy TrEMBL
Match: A0A0A0L0D3 (Chorismate mutase OS=Cucumis sativus OX=3659 GN=Csa_4G651960 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy TrEMBL
Match: A0A1S3BUV7 (Chorismate mutase OS=Cucumis melo OX=3656 GN=LOC103493750 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.0e-141 Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy TrEMBL
Match: A0A5A7V8Y3 (Chorismate mutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001230 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.0e-141 Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy TrEMBL
Match: A0A1S3BW15 (Chorismate mutase OS=Cucumis melo OX=3656 GN=LOC103493750 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.0e-141 Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. ExPASy TrEMBL
Match: A0A6J1F9R2 (Chorismate mutase OS=Cucurbita moschata OX=3662 GN=LOC111443377 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 7.0e-126 Identity = 227/260 (87.31%), Postives = 246/260 (94.62%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. TAIR 10
Match: AT5G10870.1 (chorismate mutase 2 ) HSP 1 Score: 323.6 bits (828), Expect = 1.5e-88 Identity = 163/255 (63.92%), Postives = 193/255 (75.69%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. TAIR 10
Match: AT1G69370.1 (chorismate mutase 3 ) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75 Identity = 138/251 (54.98%), Postives = 183/251 (72.91%), Query Frame = 0
BLAST of CsaV3_4G036570.1 vs. TAIR 10
Match: AT3G29200.1 (chorismate mutase 1 ) HSP 1 Score: 280.4 bits (716), Expect = 1.5e-75 Identity = 136/258 (52.71%), Postives = 184/258 (71.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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