CsaV3_4G029620.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029620.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19202488 .. 19209071 (-)
Sequence length186
RNA-Seq ExpressionCsaV3_4G029620.1
SyntenyCsaV3_4G029620.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAATTAAAAAACGAAAAATGTTATAAAAAGTGACTGGGGCTTGACCAATCAACAACGGTGAAGAAGACGGCCACCCAGAAAAAAGAAGAGTTGAAGTTGGTTGCATTTTTTCCTTATAGAAGAGAAAGTGAGGGAGAAAGAAAAGGAGAATAACAGCAAAAAGTTGATTTTTAGGGTTTTTTTTTTTTTTTAATTGAATGTGAATTAGACTTTTTAGTAATTTTTCGTCTCATTTCTAAAATCCCGTTAAGTTCCAATGTATTAGAAGGGCCTAGCGACTAATGCATATATTTCTTCTTCGTGGAGCTGAAACCACTCTCACCACGCCGACCCTCCAGCAGCCGACCACCAAACGTCACCGTCGCGCGCACCGGAGCTGTCTGCATTAGTTCAGAGCCGCGTCAATCACTCTCTGAACTAACGCGATCTTGTCGTCGGAAGTTGGATCTTGGAGTTTTTGAGTAATGTATTCTTATTTTTGTATATTTTGGTTGGGTTTCTTTAAACTTTTTTAATAGTTTAGGCTTGAGTTTAACCATATCCATTACATTTCGTTGTTAGATTTGAAGTTTTGGAAGAGTTGTGTTGCTGTCCAGCCGATAAGAAGCTCGATTTTTGGCTCTTTTGACATAAATTTGGTGAGAATCTTGGTTTTCTTGAATGGGTCATGGATATCTATTAAGTGTTTGGTGCAAAATTAAATTTATCATGATTTTGGAATGTTAGATTTGAGTTTAAAAGGTCGTTATTATGCTGTCCAGTGGAGTTAAGGTGATTTTGACAAGAGTTTGGTAAGGTTTTTGGCAAATTCAGTGAGTTTTCTTAGAGTCCCTGAGTATCCATTTGGTTTTGACATAAAATTAGTGTTACCCATAATGTTTTGGATGAAAGATTATAGATTTGGAGGATTTTGAAGAAATTTCCAGCAAAGTTTGGTATCTTTTAGGTGTTGTGCTGTAAGTTTTAATGCTTGTTCTGTCAATTTTACAATAGCCATTAAGTATGGTGTTGCTATTTAATTTACCCATAACCTTTGGATGTTAAGGTTGGGACATTGAGGTTATTAAGTAGCTATCTAACAGTTTTAAGATCGCTTTGGCACTTTTTTGGTGAGTATTCATTGGGTTTTGTTTGATCTTGGACACCCATTAGAATTGGTTTGGAATTAATGCTTACTTGTACTTTTTGGGTATTAGTTTTGAAGTTTGTTCTTGGCGAATTTTGGGTCGAATCATTGAGGAAAGTTTGGAATCGGTCTTGGATCAACTTACATTTGGGTAAGTTATTAACGTGTTGTCTAGTTGGTTGAGGTTAATTTTGACAAGATTTTGGTAAGTAATTGAGGTTTCATAACTACTCGAAGTGTTAAGTGTGCTATGATTTAAGTTACAATTCTTGGTTGTGGTTTTCTTGGAGGTTTTTGAGTACCCATTAAGTTGTGGTGCTAATTTTGTTTTACTTGCTAAATTTTGAGTTGGTTAAGTTTACAACTCTATTCTTGGTTGTGAGAGGACCCCCCACTCTCAACACACAGGGAGAATATCTATACTATTCTTCTAGGTGGTCCCTATCCCTTACAGTTCCTGCGCCCGAATTGCTCTTTCCTCTCCTCCTATACTGATGCATGATTGGTAGCCTAACACTTTTACATCTTAAGATACTGTTGAGCTATAACTATAACATACTGTTGTTTAAAGTTATTGATGAAATGTTCTTTGTCTTCTCCTTTCAGAATTCCTCAATCCATTCCTAAAGCTCAGGTCAACCACTTGTTAGAGCTTTAAAAAATTGATCGAAAAGTATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGGTATTTTCTATTATCATTTCCAAGTTATTTGCTTCATATCAAACTAGCACTTTTGTAGGGTTCATCATGTTGCTTTTATGTACAGTTTATGTGCTTATTATACTAATGGTAAAAATGTAGTGTTCTGTGTTTGGTGTTGATTCTCATTGGCATTGTTGGTCATTTTACCTTTAAAGTGGTGATATGATATGTGAACTAGGATATGATACTATGTTAGGTTTTACTGAGGGGATTGTTTGGTTTCTAGTTGTGTGAGAATTGGAGTTTGTCACTTGTATGAGAATCTTATAGTTGTGGAATTGGATTTTCAATACAAATATGTACGATGTACTAGAAGAAAGGGGAGGGGGAATATTTTGGAGTAAACTATTTTATTTTAATAAAAAAAAAAAAAAATGATTTCATTGATGTATGAAATAAACCAAAAGGATGGATAGTCCATGATAATTACTAAAAGATTTCTCATTTGGATACAAAGGAAGCATACGATTTCATATGACCAAAATGCTAGACAGTTTACACCAACAGATAACATAGTGGATGATGACCAACGTCTGACCAACAAAATCTTAATAAAAGAAAATAAGAGGAAGTCGGATGGTGAAGACCAATCTAAGAGTCGAAGAAGAGAACATTTCCCTTTATGCCTAAAATTGAACCACGGTAAGAAAGATATCCCATTGAATTCATACAATCATTTTAATTGAAAGTAGTGTTAAAAACAAAGGGGAGACTGATCCCTGGACCTTAAGGTGTATGCGTGCAAGAAGTAATGGAAGGGGCCTATCGCTGATGAGTGAGTGTTGTGCTGTTATGGGGCTCTAAGTATTGTTGTTAGTTGTTTGGCAAAATTATGGGTAAGGAAGGGAGAAGGGAGCTGATAGAACACCAGAATATGTGTTCTGGTATATTGATATATTGCTCAAACGATTACAAAAAGAGAATTGATATTTCAATTCTTACTAATCAAACAGAAATAAGAGCAAACAAGAAAACTCAGTAAACCTCTCTGCCCTCATCACTCTCAAGGAAATTGGCAGCCCACCCCTCACTATCAAAAATGATCTCTCTTCTTCTCTCCCCCTTCCTTCTCTTTTACACCTTTTCACGTAACTAATTATGGTCCCCACCAAAGTGGTTTCCACCCATACTATTTTCCCCTTTATCTGCACATGCTACTTCCTTCTTCTTCCTTCTACTATATTGCAAAAGGATTGGTGGTCTATCATTACTCTCCTCCAAACTTTTCTTGTACTATCCGGAGATGTTCTTTTACTGCTCCCAAAATCACGTCCCTTTCCTTTAGTTGCTGGTCCAGTGTTTAATTGGGTGTCTTCATGTCTCTATTATAAAGGAGTGTTGGTGGTAGCCAACCATAAACAACCTGGAAAGGTGTTATCCCAATTGAACGTTGATACATAGTATTGTACCAATACTCAGCCCAATGCAGCCAATTTGTCCACTCTCTCAGCTTCTCTCCATAGAAACATCTCGAGTGTGCCTCAACTCCTCTGTTCACTACTTCTATTTGTCCATCTGATTGTGAATGATAAGCAAATGATAAGCAGAACTTCTATTCAATTTAGTCCTCGACAGTCTAAACATCTCCTTCCAGAAATTACTCAAAAAGATGGAAATATTTACCCTAATTCCTAAATCTTTTCTTTCTTTTATTTCCTTGTGTATTTTATTTATTCTCCTCGTTGTACCTATTGTAAAATTCACTAGAAAATACTAACAAGAAAAATATCGTAGTTTTTCTCTTGATAACTCGGGTTTCCACGTAAACCTGTGTGTTCTTTGTTTTTACTTCCAATTGACCATTTATAAGCTCCTGCCTTTAAGAACTGAGTTAATGGTGTACCCACACTGCCATAATTCTTGACTAATCTTCTATAACACCCTGCAAGACCGAGGAATCCTCTTACTTCTCGCACATTAGTTGGTATTGGCGACTCTTTAATGGCTCAATTTTTTTTCAGGATCTACCTCCACCCCTTTTCTTGAAATTATATGGCCCATATACTCCACTCTTTCCTTTGCAAAACCACATTTATTCAGATTGGCGTATAATTCGTGCTCCCTCAATATTTCCAACAATATTTCCAACACTAACTCCCAAGTGTTGAAGATGTTCCTCTAAACTTTTGTTGTAGATCAGAATCTCATCAAAGAAAACCAAGACAAACCTTCTGAGATACGGTTTAAATATTGTGTTCATCAGTGGCTGAAACGTAGACAGTGGATTTGTGAGGCCAAAGGGCATGACAAGGAACTCGTAATGGCCCTCATGAGTTCTATATGCAGTCTTCTCCACATCTTATTTGCACATCCGAATATGATGATATCCAGCCTTGAGATCAATCTTCAAAAACATGTTAGCTCTATTTAATACGTCAAATAATTCTTCTATAATGGGAATGGGAAACTTGTCAAGAAAAGTCACATTGTTTAATGCTTGGTAGTTCATATAGAATCTCCAACTTCCAGCCTTCTTTTTCACTAGCAACACTGGACTGGAATAAGGACTAGTACTTGTTCGTATTATCCCTGAGGCCAACTTCCCATCTCCTCTTTTTGTTGATAGGCGTATCTGTATGGTCTGACATTTACTGGGTCAGTTCCCTTCTTGAGGTGTATATGGTGTTCAATGCTTCTCCTTGGTGGTAATTCTCCTGGCCACTCAAAAACATCTTCAAACTTGGCAAACATTGTTGGTATAGATTGCTTAACTGTAGGGACTTCATTAACTCCATACAGTTCTGCAAATGAAATTCCTCCCTCCATGGCTCGACATTCTATTTAGTATCCTTGATCTATTGTTGTCCGTGTCTTCATCATATGCTTCAAACTTACTCGAGCGTTCGTTAGACTAGGATCTCCCCTTGTGACGATCTTTTGTTCATTATGGCAAAAGGTTAATGTGAGGCTTCTCCAGTCAACTTCCGTCACCCCCAGTGAGTGCAACCACTGCATTCCAAGTATTACATCCACTCCTCCGAGTTCTAATGGTAGGAAATTGTCAATGATCTTCCAATCTCCTAGAACTAGTTCTATTTTGCTACAAATTCCTTTTCCCTTCACAGTTGTGCCAAGCCCAAAATGACTCGTAATTAGAGGTTTCCTCCATTGGCAGATTTAACTGATTCACCAACTTCTCTAATATGAAGTTATGTGTCTCTGCAGTCTATCAAGACCACTACTGCCTTCTCGTTCATCACCCCTTTCACTTTCATTGTGTCTGGATTAGTTAATCCCACCCCTGAATTCAAGGATAACTATACCACCGGCTTATTATTCTCTTCAACTTCTTTTTCATCTTAGTTGCTTCCGCATAGTCTTCTTCAATAACTTCCAATTTCTCCCCATTTGCCCAGACTACAGAACTCTGAGTTCTTTTTGTTTTTTTACTTTACATCGATGTCCGGCATAATATTTCTCTTCACAACGGAAGCAGAGTTCTTTCTTGCGTCGGGCTTGGAACTCCTCATCGGACAACCTCTTTGATGATCCTTCCTGCCGGTTGTTGCCTGCCATCACTCCGCTCAGTGTAATTGTCCTCATCGGAAAATTTCCTCCAGACATTGTCTCATTTGAAGTAATCAGCAAATTCGTTTTAAAAGAATTAGGTGATTGGGCCTTACCTTCCACTGCTTGCTTGAAGCCCGCTTCACTTCTAATCACCTCCAGGTACTCAATTTTCTGGGTTGCTGGGCTATCAGGAGCCTATGAGTTAGGTTGCTGAGCTCATTATGTAATTTCATACTTTCAATGAAATTGTTTCTTATTTCAGAAAAAAAAACTGAAGTATTGGGATAGAACCCTCTGATCTTCATTGACTCTTCTTATCTTTCGTGAATATGAACCAGTACACATCAAGAACATGCTTTTAGTTTTATAAGAAAGAATGTTATAAAATAACGTTAAACTATCCTGAAAACAGTTTTTCTAAACAGCTCCTGTACTTCTCCCGCCTTGAGATCGGGATCCTGTCCTTTATTTATCTTGTCATTGAAATTAATGTTGTTTCATATCTTGTATGTACCACATTTAATGTCTTAGCTATTTTGGTTTGCTCTTACCCACCCGCCTGTTTGTGAGTTTTTTGGTTGCATCCACAAAACCTGTTAATAACATCCATTTTACTAATACCAGATCAATAACTTCCAAACACAATCTCAGTTTTTTTTAATGGATGTTCTCATATTCTGGCTGCAGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAAACATATGCAGTACCTTTGAGAATTGTACATTACATCTAAGTTCCCCATACTCATCTTTTTAGGTGGGATTTTCTCTTATCCTCTTCATCATTCAAGAATTGAAGATAAGAATGGGATAAGAAAGCCCTTTATTACTTGCCATCTGCAGGATTTATTGTCCACCGATTGCAGATTGTTGGAAAAGACACAGAACTGGACCATTGAATTCACAAGCTATCTTGATTGATATGTCATAATCAAACTACCTTCTGTTCTGTACACTTTCTCTTTTTGTTAATATCTGCTTTGCTTGAGCACCCTGCTTTCCAATGATACAGATAGTTTACACTAAGTTCATAAGTCTTCCACATGACATTTTGACAAAATAGGGCTGAG

mRNA sequence

ATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAA

Coding sequence (CDS)

ATGCCACACCGAACACGACCTATGACCGCGCTTCTTGTATTTACTGGTCTGAATGTTGTGCTGGTATCAACCATCACCCCGGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGACGTCGGCAACAACGTGAAGCTGCTTTAGGGAAAGAGCTTTTAGCAGACAGATAA

Protein sequence

MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR*
Homology
[Close]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match: XP_031740521.1 (uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharacterized protein LOC101220293 [Cucumis sativus] >KAE8649679.1 hypothetical protein Csa_012121 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 9.0e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match: XP_038882345.1 (uncharacterized protein LOC120073600 [Benincasa hispida])

HSP 1 Score: 123.2 bits (308), Expect = 7.6e-25
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAA GKELL+D
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAATGKELLSD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match: XP_008455709.1 (PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo] >XP_008455710.1 PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo] >XP_008455711.1 PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPM ALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREAALGKELLAD
Sbjct: 1  MPHRTRPMAALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREAALGKELLAD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match: XP_022153946.1 (uncharacterized protein LOC111021335 [Momordica charantia])

HSP 1 Score: 113.2 bits (282), Expect = 7.9e-22
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREAA+GK
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREAAMGK 55

[Close]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match: XP_022931821.1 (uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_023517396.1 uncharacterized protein LOC111781173 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 2.3e-21
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRE RR+QREAA+GK
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRREHRREQREAAIGK 55

[Close]
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match: A0A1S3C1N0 (uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-25
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLAD 60
          MPHRTRPM ALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREAALGKELLAD
Sbjct: 1  MPHRTRPMAALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREAALGKELLAD 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match: A0A6J1DM83 (uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021335 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-22
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREAA+GK
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREAAMGK 55

[Close]
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match: A0A6J1EUP9 (uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC111438118 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRE RR+QREAA+GK
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRREHRREQREAAIGK 55

[Close]
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match: A0A0A0KYV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431930 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 62
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR
Sbjct: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGKELLADR 54

[Close]
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match: A0A6J1HS71 (uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-21
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAALGK 56
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRE  R+QREAA+GK
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRREHCREQREAAIGK 55

[Close]
BLAST of CsaV3_4G029620.1 vs. TAIR 10
Match: AT5G09225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 5.1e-19
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREAA 53
          MPHRTRP+  LL+FTG+N VLV TITPVYDFVCF PYWERRRER RQ+REAA
Sbjct: 1  MPHRTRPLKGLLLFTGINFVLVQTITPVYDFVCFLPYWERRRERIRQEREAA 52

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740521.19.0e-26100.00uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharact... [more]
XP_038882345.17.6e-2596.72uncharacterized protein LOC120073600 [Benincasa hispida][more]
XP_008455709.11.0e-2496.72PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo] >XP_008455710.1 P... [more]
XP_022153946.17.9e-2296.36uncharacterized protein LOC111021335 [Momordica charantia][more]
XP_022931821.12.3e-2194.55uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 unchar... [more]
BLAST of CsaV3_4G029620.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029620.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C1N04.8e-2596.72uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=... [more]
A0A6J1DM833.8e-2296.36uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1EUP91.1e-2194.55uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC1114381... [more]
A0A0A0KYV74.2e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431930 PE=4 SV=1[more]
A0A6J1HS719.4e-2192.73uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268... [more]
BLAST of CsaV3_4G029620.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09225.15.1e-1980.77unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36392TRANSMEMBRANE PROTEINcoord: 1..55

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_4G029620CsaV3_4G029620gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G029620.1.exon5CsaV3_4G029620.1.exon5exon
CsaV3_4G029620.1.exon4CsaV3_4G029620.1.exon4exon
CsaV3_4G029620.1.exon3CsaV3_4G029620.1.exon3exon
CsaV3_4G029620.1.exon2CsaV3_4G029620.1.exon2exon
CsaV3_4G029620.1.exon1CsaV3_4G029620.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G029620.1.cds4CsaV3_4G029620.1.cds4CDS
CsaV3_4G029620.1.cds3CsaV3_4G029620.1.cds3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_4G029620.1CsaV3_4G029620.1-proteinpolypeptide