CsaV3_4G024130.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCCCTAAAGTGATATATAGTGCATCGTATTCTTCGTAAGTGTTGTAGTCTCAAAATTAATGTATAGAATGTACTAAATTGAAGAGTAAACCAAGTCTCATATTATTTTAATTTGTTTGTTTGTTTTTGTAAAGAGAAAAAATGGTTACTACGTAAAATATTTGATACAAGAAATGAAGCAGATTATTGAATTAAGAATTATAAAAGGGAAGGGAAGAAGACAAAGGAACGAATAGAAAGATGGCACGTGTAAAGAGGGGTTCACTTCAAGGGATAATCTTCTTTTTATTTACTTTCTCCATCCTAAGCCTAAAGGAGCAGAGCAGAGAGAAGAAACCCTCTCTCCTTTTTCTCTCTCTCCTCACTCATTCAAAAAGGAACTCTTCAGGTTAGGTTTCTTTTTTTTAATATATATATATATATGTTTGTGTGTATATATATGAATTCTTGCTATTTTTGCGCCAATTTATTTGGATTAAATCTTTATTTGATTGTTTAAGCGATCATGTATGAGTAATTCCATTTCCTCCCTGATTTTCTGTTTGTTATAATTGTTTACATTTTGAAGCTGGGGTTTTACTTTTCCATGGGATTCTGAGTTCTTCCATCCACATCCAGAAGCAAGATTCCTCTCTCGGAGATATCTTTCCTCAGGTTAGGGCTTATGTTCTTCCCTTCTCTCAACACTTTTTCCCCTGTTCAAATTTTTTTAACCTCTGTTCTTCTGTTGTTAGCGTATGAATTAAAAGAGTGGGGGTTCTGGGTAATGCTTGCAAGCTTCTATATTGGGGTTTTTTTATATATATAATCGTTTCTGTTATTTGATCCACGGAGGCACATGGGGTTTTTTTTTGTTTTTTTTGTTTTTTCTATCTGCCAATGAAACGTATTGAAATTTCATTTGATTCTATATGGTGATTGAATTACAGTTCTTTTTTACAATTGGGTTGCTAGAAGTGTAGAGAAAATGAGAGTGGTTCTGAAATTAAGCTCAAAATATTAGACTGGGTTACTACCTTTGTTCTTAAAAATGAATTGCGTATTCTCTTCGATGAGATATACCAACGAGGAGATCCATCAGTCTCGGCCTTAGCATCTTGTGCATAAGTTTTGTTATGCTCTTACCTTAGATGATGCGAGGTACTGTTTTTGTAGCTAACACCTTTGTTTTGTGCTAGAACTAGTCTATTAAGTTACTATTGGAAGTGAAGAGAGAAAACTACTTTAAGATTGAGGTTGAGACCTTATGGCATTAAGTTAACTTTCGTCAACAAACTTCCTGTGGGAGACAAAGAGACGTTTAAGAGGGGAATTTGAAGAGGATGGAACTTGGGCTTGCTGAATTCCTTTTTTTTTTTTCATCCTACTTGCTGGTCTCACCCCCACCCTATATTCACTGACTCAAGTGCTTAAAAGTTCAATGGCTGAAAGTGAATGTGGTATTACAGTTAGAGGATTGAACAATTTAAACTGGCAAATGTTTGTCCAGTGATTTGTTGTTTTGGCCATGTACTCGATCTCCAAACTAGTCAAATTTCATTGATCTAACTATTTTATTTTCAAGTCTAGCTATTAATTTGATAATGAGGCATTGACGTGATTAATTTTTCATTGTCAGCATAGAGTTACTGTATGAATATTTAGTTTCTTGTCAAACTTTGATTTTGGAATAGTAGTGACTAGTGAGTTTAGAGGACCAGAGTGATGTATATACCAAAGTTTATGGACGAAAATATGTAATTAGCATTTGGAGGCAATTACAATTTTCAGAATTTTAGATGGCAGATCTGGATATATTGCATCCCACTACTTTCAACTATAATTATTGTGTGTGGATGTTGTATATGTGGCCATTTATTTAGATGCTTACATGTATGTGGACGAATGTAGTTGTCTGGTAATGCGCTGTGACATTCTCATAGATCTATGAGAAAAAAAAATTAACTTAACTGTAGAGGTATCACCCACCCCACCCCATCCGGTAAGCTTACTTCTGGCTACCTGAAAAAATATCTCAATCTTTCTCATGTATCGTTGTCACACATTCAGGAGTGGTACGTAGAACCAGATTCCTGAGTCTAGAATGTTTGCAGGGTAGGAACCACATGAGATATTTCATATTCCAAGTTATTGGCCTATGTGATTTTTTGAGCCATACCTTAAGCTTTATGCCCCACTCTTGGAGTTAGGTCATTCTCGTGTTAAATTATATCTTTTCTTTTTGAGTATTTTTTAAGTGATTTTAATGCAGTATACTCTAAAAGATGGATCCCCATGATGAGGCTGGATGCCAAGCTCCCCCGGAAGGGCCCTTCCTCTGCATCAACAACTGTGGCTTCTTTGGTAGTGCAGCCACTATGAACATGTGCTCCAAGTGTCATAAAGATATGATGCTGAAACAAGATCAGGCTAAACTTGCTGCTTCATCTATTGAAAATTTTGTCAATGGATCATCTAGTGGCAGTGTGGAAGTACCTGAAAGTGTTACCGATGGTGCCATTTCTGTGGAACCGAAGACTGTTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGTGAGAAACCAAGTGAGGGTCCAAAACGTTGCAACTCTTGCAAAAAGCGTGTTGGTTTAACAGGCTTCAATTGTCGGTGTGGTAATGTATTTTGTGCAGTTCATCGTTACTCTGACAAACATGACTGCCCCTTTGATTATCACATGGCTGCGCAAAACGCCATATCCAAAGCCAATCCTGTTGTCAAGGCTCAGAAGCTGGATAAGATCTAGATTTCTCTTGACATGTATGTGTCCTAAATTGATGTTCATATCCAGGTGTGAGATGGGATTATGATATGCTGCAAATCTATGTATTTTTGCTTTATGTTCATATATATGTTGAAGAGATTGCAGTTACAATATATCTGAATTCTGAAAGTTCTATTTGCTTTGTGATTCTTTGTTTGTGCTTGTCTTAATGGACATCATCGTTATTGGCCTTCTAATGCTTCCTCTGTGTTTTGTAGCCATTCTCTTGACTGAGTGACCTTGCTGTTTATTATTTTCCTATGCCCTTATGTTTGATCTTCCAAGCTGTACTTATTATCTTAATTTGCATCAACTTGTCAAGGGGTTTCCTTGTTCTAGATGTTCAACCTCACTTGAAATCCAAAACAGCAGTATCTGTTTTTCAGCTGCTACATTTTATTCCAGATTTTCACTGGCAATCATAGTGAATGGGCATAGTGGTTCAGTTGCCGTGTGTTTTTTAACATGGAAGTGTCTTTTTCTAATCCATGTATTTTGGTAGTATCTTACCAGAAGTCTCTTTTGTGAACATCAAACTCTAGCCTGTTTTAGCTATATTCTATCTGAATTGGTATAAACTTATTTGTACCTCAATAGCATTAGTTATTTGAATCGTATTAATTTGTTAAATGGTAT ATGGATCCCCATGATGAGGCTGGATGCCAAGCTCCCCCGGAAGGGCCCTTCCTCTGCATCAACAACTGTGGCTTCTTTGGTAGTGCAGCCACTATGAACATGTGCTCCAAGTGTCATAAAGATATGATGCTGAAACAAGATCAGGCTAAACTTGCTGCTTCATCTATTGAAAATTTTGTCAATGGATCATCTAGTGGCAGTGTGGAAGTACCTGAAAGTGTTACCGATGGTGCCATTTCTGTGGAACCGAAGACTGTTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGTGAGAAACCAAGTGAGGGTCCAAAACGTTGCAACTCTTGCAAAAAGCGTGTTGGTTTAACAGGCTTCAATTGTCGGTGTGGTAATGTATTTTGTGCAGTTCATCGTTACTCTGACAAACATGACTGCCCCTTTGATTATCACATGGCTGCGCAAAACGCCATATCCAAAGCCAATCCTGTTGTCAAGGCTCAGAAGCTGGATAAGATCTAG ATGGATCCCCATGATGAGGCTGGATGCCAAGCTCCCCCGGAAGGGCCCTTCCTCTGCATCAACAACTGTGGCTTCTTTGGTAGTGCAGCCACTATGAACATGTGCTCCAAGTGTCATAAAGATATGATGCTGAAACAAGATCAGGCTAAACTTGCTGCTTCATCTATTGAAAATTTTGTCAATGGATCATCTAGTGGCAGTGTGGAAGTACCTGAAAGTGTTACCGATGGTGCCATTTCTGTGGAACCGAAGACTGTTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGTGAGAAACCAAGTGAGGGTCCAAAACGTTGCAACTCTTGCAAAAAGCGTGTTGGTTTAACAGGCTTCAATTGTCGGTGTGGTAATGTATTTTGTGCAGTTCATCGTTACTCTGACAAACATGACTGCCCCTTTGATTATCACATGGCTGCGCAAAACGCCATATCCAAAGCCAATCCTGTTGTCAAGGCTCAGAAGCTGGATAAGATCTAG MDPHDEAGCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDMMLKQDQAKLAASSIENFVNGSSSGSVEVPESVTDGAISVEPKTVQSHALPAMGSVEGEKPSEGPKRCNSCKKRVGLTGFNCRCGNVFCAVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI* Homology
BLAST of CsaV3_4G024130.1 vs. NCBI nr
Match: XP_011653588.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform X2 [Cucumis sativus] >KAE8649508.1 hypothetical protein Csa_018186 [Cucumis sativus]) HSP 1 Score: 352.8 bits (904), Expect = 1.6e-93 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. NCBI nr
Match: XP_031739632.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 352.8 bits (904), Expect = 1.6e-93 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. NCBI nr
Match: XP_008449732.1 (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Cucumis melo] >XP_008449733.1 PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Cucumis melo] >KAA0041399.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 350.1 bits (897), Expect = 1.0e-92 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. NCBI nr
Match: TYJ96150.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 348.2 bits (892), Expect = 4.0e-92 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. NCBI nr
Match: XP_038901716.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Benincasa hispida] >XP_038901717.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Benincasa hispida] >XP_038901718.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Benincasa hispida]) HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86 Identity = 158/170 (92.94%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy Swiss-Prot
Match: A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2) HSP 1 Score: 221.9 bits (564), Expect = 5.6e-57 Identity = 109/170 (64.12%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy Swiss-Prot
Match: A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 5.6e-57 Identity = 109/170 (64.12%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy Swiss-Prot
Match: Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.9e-55 Identity = 106/172 (61.63%), Postives = 129/172 (75.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy Swiss-Prot
Match: Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2) HSP 1 Score: 201.1 bits (510), Expect = 1.0e-50 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy Swiss-Prot
Match: Q94B40 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=SAP6 PE=2 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 5.7e-33 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy TrEMBL
Match: A0A1S3BMQ6 (zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Cucumis melo OX=3656 GN=LOC103491525 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.1e-93 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy TrEMBL
Match: A0A5A7TJ58 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00450 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.1e-93 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy TrEMBL
Match: A0A5D3B8H1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001200 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 1.9e-92 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy TrEMBL
Match: A0A6J1H314 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111459547 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84 Identity = 154/170 (90.59%), Postives = 158/170 (92.94%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. ExPASy TrEMBL
Match: A0A6J1K3D1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111490785 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84 Identity = 154/170 (90.59%), Postives = 158/170 (92.94%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. TAIR 10
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. TAIR 10
Match: AT1G51200.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. TAIR 10
Match: AT1G51200.3 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. TAIR 10
Match: AT1G51200.4 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CsaV3_4G024130.1 vs. TAIR 10
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 142.1 bits (357), Expect = 4.0e-34 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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