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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. AACACTGTCTTTAAAGTGAAAGAATATGCCATCAAGAGGAACAGCAGGGACATTTTGTGGGAGATTACAGCGACCAGACTTGGTGGTAACCACTTTCTGTTCGCGAGAGGGAATGCATGTTTGAAACTTGGAGGAACCAGACTTGGAGGTAAGAGTTGGCTCAGTAGTATTAGGAGTTGTGTGAGTGTTGGGGTCTTCAGTAGCTTGAGTAGGATTGGGATGGAGGTAGTGGAGAAACCTGGAGCGGGAGCTGACTTAGTAGCAGTGTTAGTCGATGAGGACCGCTAA mRNA sequence AACACTGTCTTTAAAGTGAAAGAATATGCCATCAAGAGGAACAGCAGGGACATTTTGTGGGAGATTACAGCGACCAGACTTGGTGGTAACCACTTTCTGTTCGCGAGAGGGAATGCATGTTTGAAACTTGGAGGAACCAGACTTGGAGGTAAGAGTTGGCTCAGTAGTATTAGGAGTTGTGTGAGTGTTGGGGTCTTCAGTAGCTTGAGTAGGATTGGGATGGAGGTAGTGGAGAAACCTGGAGCGGGAGCTGACTTAGTAGCAGTGTTAGTCGATGAGGACCGCTAA Coding sequence (CDS) AACACTGTCTTTAAAGTGAAAGAATATGCCATCAAGAGGAACAGCAGGGACATTTTGTGGGAGATTACAGCGACCAGACTTGGTGGTAACCACTTTCTGTTCGCGAGAGGGAATGCATGTTTGAAACTTGGAGGAACCAGACTTGGAGGTAAGAGTTGGCTCAGTAGTATTAGGAGTTGTGTGAGTGTTGGGGTCTTCAGTAGCTTGAGTAGGATTGGGATGGAGGTAGTGGAGAAACCTGGAGCGGGAGCTGACTTAGTAGCAGTGTTAGTCGATGAGGACCGCTAA Protein sequence NTVFKVKEYAIKRNSRDILWEITATRLGGNHFLFARGNACLKLGGTRLGGKSWLSSIRSCVSVGVFSSLSRIGMEVVEKPGAGADLVAVLVDEDR*
Homology
BLAST of CsaV3_4G016030.1 vs. NCBI nr
Match: KAE8649404.1 (hypothetical protein Csa_004604, partial [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query: 1 NTVFKVKEYAIKRNSRDILWEITATRLGGNHFLFARGNACLKLGGTRLGGKSWLSSIRSC 60
NTVFKVKEYAIKRNSRDILWEITATRLGGNHFLFARGNACLKLGGTRLGGKSWLSSIRSC
Sbjct: 1 NTVFKVKEYAIKRNSRDILWEITATRLGGNHFLFARGNACLKLGGTRLGGKSWLSSIRSC 60
Query: 61 VSVGVFSSLSRIGMEVVEKPGAGADLVAVLVDEDR 96
VSVGVFSSLSRIGMEVVEKPGAGADLVAVLVDEDR
Sbjct: 61 VSVGVFSSLSRIGMEVVEKPGAGADLVAVLVDEDR 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8649404.1 | 3.5e-45 | 100.00 | hypothetical protein Csa_004604, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G016030.1.exon1 | CsaV3_4G016030.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G016030.1.cds1 | CsaV3_4G016030.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G016030.1 | CsaV3_4G016030.1-protein | polypeptide |
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