CsaV3_4G010450.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G010450.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	non-specific lipid-transfer protein 2P-like
Location	chr4: 8273067 .. 8290972 (+)
Sequence length	318
RNA-Seq Expression	CsaV3_4G010450.1
Synteny	CsaV3_4G010450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAATCTTGTACACCTTCGATTAGACTTCACAAACTACGCTATCTGGAAATACCAAGTCTCCTCAATTCCTCAAAGCACATTCTCTGCTTGGTCACTCTTGAATAAAAATTTTAAGACCAATCACAAATTGCCACATGATTTATTAAGTTAATCATGAAAAGTACAAATAATTAAATTTGGGACTAATTAAAATTCACATGTGTCCCAAATTAAAGAATTGAAAAACATAAATTGACCATTCTAATAATGTCACATGTTTTTATCTTAATCATTGGATTAAGTTAATCATTTTGGTTCAATTAAGCCCAAAAATAAGCAAAAGATTAAATATAACCTAAATCCATATGGTTGGGCCCATGGGTCTGGTCCATGGACCAATCAGGTTCAAGCCCATAAAGCCCACCAGTGAACTCTATAAATAGAGAAATTTTCATCATTTGTAGATGTTGGAAATTTTTTACTCCAAAAGGTCTAGAGAGAATTCTCCCAAAAACTAGAAAATTCCCTAACTCCTGAAGTCGACCCTCGAAGATTGAAGCTCATTTGAAGATACAAACTTTCTTCCAAGACTTCAACTTCAAGAACATCACGTGTTCCGCTTCCTCAAATCAAGCGTAAGCATTCAACCAACTTGAAGAACATTACGTGTTCCGCTTTTCCACATTACGTGTTCCGCTTTTCCAAATCAAGCGTAGACGTTCAACAAACGTCAAGAATGTCATGTGCTCCGCTTCCTCCAAATCAAGCGTAGGCATTCAGTCGAGAGAGAATCAGATGATCAAATTCTAGAGATTGAACCGCATCGCATCAAATCAACAAAGATACAACATGAACACTCAAGTTCAAGTCCACAAATTAAATTTCTCCGAAAATCTCTTGTGAACAGTCACATTGACAATTCTCTTCCCTGCCCTCCCAAATTTTTACCTTCAACATCTGCTGGAACCATCCTTGAAATAAATCTTGAGCATCTTCGTTGGCTCTTTTGTGACCAAGCTTTTATCACCCTCATCAACGCAACCTTATCCCCTTCGGCTCTTGCTCATGTAGTCGGCACAACCTCATCAAAAGCATTGTGGTTCTCTCTAGAAAAGAGGTACTCCTGCAACACCAGATCCAATATTCTTGATCTTCGATCTGCCCTTTACACCATAAAGAAAACTCCATCTGAAAACAATTGAGCAATATACTTTTCGAATCAAAGTCCTTGTCGAGAAGCTTGCTGCCGCCTTTGTCGCTCTAGAAGATGAATAGGTTTTAGTTCATACCTTAAATGGACTTCTTGCAACCTTCAACACCTTTCGCACGTCAATCCAAACTCGAAGTGGTACCATCTCCCTTGAAGAACTTCACACCCTTCTCATCTCTGAAGAATTCACCATAGCAAAATCGTCCGCCATCGAAGCCATTCCTACCACCATGGAAGCCGCACAAAATTTCCATCCTTCATCCAAGGGTAGCCGCAGACGAGGAAGACGACACTGTAACCCTCATTTTAGTTCTCAAAACCAGACAAATTATCGTGAACATGGGTCGCATGGAGGAACATTTTTCAATCAGCCCAACATCTTAAATCGACCCAATTCTTCATTCAGCCCAAACCGTCCATCATTCAATTTCTCTTCTCACTGTGGGCTCATTGGACCTTTCCCCACTCATGGGCCCATTTTTGGGCCTGAAACCAATTCTAATCAAGTTGGACGCATATTCTGTCAAATTTGTAAAAAATTCGGACATGACACCCTCGATTGCTACAACGGTATGAATTTCTCTTATCAAGGAAAACATCCACTCTCTCAATTAGCAACAATGGCGGTAAACTCTGCATTTTCAATCTTCTGCTGAAAATTCTAATAATTTTTGGTTATCTGACAGTGGATGTAACGTTCATATGATAAATGAGTTGACAAATCTCATCTTATCCAATCATTATAATGGTGAGGAAACTATCATAGTGGAAAATGGTCAACCTTTAAACATTCGAAATATTGATAGTGGTAAACTCTCAACTCCCTCTCATACCTTTAATCTTTCAAATATACTTCATGCTTCGCAACTTGTTGCAAATCTCTTATCTGTTCATGAATTTTGCCTTGATAATAAGTGCATTTTTATTGTTGATACTGACTGGTTTCTCATTTAGGATAAAGTCACCGGCCGAACTTTGTATACTGGTGAAAGCATCAATGATCTCTACCTTATTCCCAGTACTTCTCATCTATCCACATATACTATGCATTTCAAAATTTTAAATTTTCATGCAAATTAGGAGAATTCATCATTATGGCATTTTCATTTGGGTCATCTTGCTCCAAGGATTCTAAGTTCAATTTTATCTCGCTTTGGTCTATCTATATCTTCTTCTCTTTCAACTTACAATTGTATTGGTTGTTTAAAAGCAAAAATAACAAAATTACCTTTTCCTATGTCTTTGTCCACTTCTCTTACACCACCTGAACTTGTTCATAGCGATGTATGGGGTCCTTCACCAATTATTTCTTCCAATGGAAATCGATATTATGTTAGTTTCATTGACAATTTTAGCAAATTGACTTGGCTCTTTCCTATTGCTTATAAATCAAATGTTCCATCTATTATTTAAAAATTTATTCCCTTCATTAAAAATCAAATATCTCAAAAATTAAAAGTTTTTAGATTAGATGGTGGTAGTGAATTCTGCAACAATTCCTTACAATCCGTCTTCGAATCCAAAGGTATTTATCATAAAAAATCATGTCCTTATATACCTGAACAAAACGACATTTTAGAACGTAAACATCGTCATATTGTTGAAACTGCAATGTCTTTAATTTTTCATTCCTCTTTTTCCCTTTAATTTTGGCCTTATGCCTTTTCTACTGCAATTTTCCTTATTAATCACATGCCCTCCCCTTACTTAAAATGTTATCACCGTTTGAAATGCTTTTTGGTCATACTCCTGATTTGCACCATTTAAAAGTTTTTGGATGTGCATATTATCCTCTCCTTAAACCCTACACCAAACATAAACTTGAACCAAAAACCATACAACACATTTTCTTAGCCTATCCTCACAATTTTAAAGGCTATATTTGCTATAATCCATCTACCAAACAAACCATTGTTTCACGCCACGTTATCTTTCATGGAACAATTTTCCCTTTTGCCCAAACCACTACTTCTCACTACAAGAAATCGGGAGTTTTCCGACGCAAGAAAAATCATAGGAAAACACGACGATTGTGTGCGTCGGGAGAGCCCATTTTCTTGTAGTGTCTTCCTCATCACAAAATCAATCCTTTTTTTATCCCAGCTTACTACTCACCTTACTCAATCTTCCACATCCTACATCCTCACACTTTATCCCCATACAATCTCCTACTCCTAATCCTCCCACTCCTGACATTACTTACTCACCCTTTATGGATACTAATGCCTCTTGTCAGTCTTTGCATGTTTCACCTATTGTTGATACAGGAAATAACATAGAGGCTGTCACCACCAATGCACCAGCTCCAATTCCTCCTCAAAACACTCATGCCATGCAAACTCAAGCAAAGTCAGGAATTTTTAAACCAAAGGCATTCCATATGATCACCACGACTCTTCCAACTCTAACATCAGACACTGAAACTTCCAAGTATCATGAATGGAGAGATGCAATGTGTGAAGAATTCAATGCTCTTCAAGCACAAGGTACTTGGTCTTTAGTCCCTCACCATCAATCCATGAATATTGTTGGTTGTAAGCAGGTCTTTTGTACCAAATATAATCATGATGGCTCAGTTGCTCGCCACAAAGCACGCCTAGTTGCCAAAGGGTATCACTAGGTACAAGGTTTTGATTTTGATGAAACTTTTGTTATGTTGTCAAAAGGCCTACTATACGAATTATTCTTGCTCTAGCTGCTCAATAAAATTGGTCATTGACACAGTTAGATCTCAAAAATGCCTCTCTTCATGGTGTTCTCCAGGAAACAGTATATATCTCTCAACCTACTTGTTTTCATGACAAAAATTTCCAAACCATGTGTGTCTTCTACACAAGAGCCTTTATGGCCTCAAACAAGCCCCTCGTGCTTGGTTGAATGCTTTACCTCTTATTTATTTACTTTGGGTTCTGTTGCTTCAAAGATTGATCCATCTTTATTCATTTGACATGTTGGATCTTCTCTTACTTACTTACTCATGTATGTTTTGATGATACTATTGTCACTGGCCCAGACTCCTCTTATATTTCTCTTCTAAAAAACCAATTGGCACTTGAATTTAAAATATCTGATCTTGGTTCTTTAAAGTATTTTCTTGGTCTCGAAATACAATTCTCCACTAATGGCATTTTTGTCAACCAAACACATTGAGATTGATTCCCATTTTGTTCGGGAAAAAGTTCTTCGTAAAGACATCTCTGTTCGACGCATCTCCTCCAACAAACAACTTGTTGATATACTCACAAAGCTACTTCTGTCTCTCATATTTCTTCACCTTTGAAATAACTACTAACTCCCTCTGAATCTTTGGTTTGAGGTGGGATATTAGGAAATAATATCATATTACAAAATCTACTCCTATAATCCCTCTATTTGTTGTAAATTGATTTGTAATTATTTTTTACCATATTTGTATCTTCAAGCATTGTATAAATATTCATTTTGATCAATGAAAATAGCAACCAAATTCAATACAATTCATTGGTATTTTACATGAAGGAGAGAGAAATGAATAGGAAATGCAAGAAAGCGGAATGGGAGGAGGACGAGGCCACAAAGTTGGCAATAAAGAAAGATGTAGAAATCGTTGATGCACAATCCATAAAACCCAGACTTTAGCTTTAGGGAAATTGTTGTTGTTGTCCAAGTCATCCAAATGGATATCGGTTGTTGCTACCCAAGTCACCGCCACTCCATCTGATCGATTCCCTCCATTCATTGGTTGCAATTTGTTCATCTACAGATGGATGTGTTGTGTGAGGAAGAAATTGTGGGTTTCAAAATTTTAGAGCTTTTTTAAACTAAAGGATAATTTAGATATTTCACATATCCATTTGTCCCAAGACTCTTCTTTTCAAAATTTGGTCTCATTATCAAATTTGTACTGTTTTTGCCAATTAATCAAAATTTAATTAATGCCTAAAACTTTAAACACTAATCAAAATTTAATCAATGTTCAATTATCATCATCGAAACACAGATAAATGAATGTTAATTAACATAATTAAATGCATGATAAAGTCAAACAAGTAAATTGTCACCATTTTGTTTGCTAATTTTATGTTTTTTAATCATAAGTGTTAGGTAACAAAATTCGTTGCCACATTTGTAAACTATATCAAAAAAATTTAATAATTTGTAACTATGTTATTTTTAGGATTTTTCTTTTTATCTATCAAACGTTTCTGATAGACCATTTTAATAGTCCATTACTGATAATACACGAAATTGTTTTTGCATATATTGATTGATAAACAGTTTGTAGGATTATCATTATTGAGAGATATCTATCATGTATCAACCACTTTAATATATTTGTGAATTAACAATATATATTTTACAAGGGGAATTTTACATAAATAAAAAAATTGAAAGTATTTACGTTATATGTCAAAAAAAACGAAGCTTAGGACACGTGATTTTCACTTTTTGAAATTTTCAAAAATACCTTTTAACATATTTAAATCTTCACACGATGATTACTCGATTCTCAGATATCTTCCATCTAGAGAGTTTTTAACGTGTTGTTCCTAGTTGATTGTCATCTCTCTTTCTTTTACAATCATTGAGAGATTTTGATCACCAATGATACTTGAGACATGATGGTTATGAATGAGGTTATTGAATAAATTTTACATATTATGTTTATGACTGAATTGAATTGAGAATGACTAAACTAGGATGTGTTTGAACTAATGACAACTATTAACTTTGATTATTAGGTTAATATATACCCTATATGTATAGTGTTCTATAGGATCCCCACTTATAGGTAGTGCATTAAGTGGATAACTTTTACTATTGATGTGTGCTCTATGAACTACTAGACTGATCTCTTACTGGGTATTTGTTCAATTTTTCAAACAAAGACAAGGCCGGTAAGAAGGATCTACGATTGTGATTGTGCCATTTGGAACTATTGTGACAATGCTTTCGCTACTTTATTTTTGTTTTCATGTTTTAGAGCCACATGTCTATTGATAGATTTATCCTAAACTCATGATTGGTCCAAATAAATTACTTTTTTGGTGATTGGTTATTATATTTTACTAAACATTTTGGTTTCTGTTTAGATTGTTTTATTGATTTTATTTCTTTATTTAATTAAAATGAATTAAACTTTGCGTAGTTTTCAGTTGGTAACATGTTATTTTTGAAATAATCTACACACAAATTGCATAAGCAGAAATTAAAACTTGTGTCGGCAGAAACCCAAACTTCATGGGTTTCACTAACATCAATCAACTCTCTCCAAGGATATATTTTTCTTAAGCGAAACATGGTGTTATACCTTTGCATAGAAAATCCATCAACATAAATCATCTTTATTGACATTTTTGTTACGTCGGAAACAGAAATTGTTCACCCAGCTAAAGAAATCTCCTTTTCTTGCTGCAGGCTCATTGGATGTTGGCCCTCTAGAGGTCGACTGTTCTCCAATACTCTGCATCAACCATAACCTTAAATATTACCACATTCTCTACTCATTCATTCAGATTCTCTAAAAAATTCCGTTGTGTTACGACCCTTGTTCTACGTTTCTTAATCCTGTTCATGGTGAACTCAACCGGCAAAGCAATTAATTAAAATGCAAACGAAGAACATAAAGGCCAAAATTAATGCAATGCAACCAAGAAAATACATACATTTAGATCCACAAATAGGACTCTCGATTCGTGTAATCCTAAGATTCATGTATTTAGATCAAAGATTGGTGAATTAAGGAGCACAAATTCAACATAGAATTCTGGAATTATGAAATATTAAAAAACCAAATGTCAGGTATTTAAACAATAATGTAAAACAAATTCTTGTACATACCGACTTCGATTAGAATTGTTGTTAGTTGATAATATTAGAAGAAAATATAGAAAATGTTGCAAACAGTATGTAAGGCATATGCTACTAATCAAGGTAAAAGTTTCCAACCTCCTAACTTCCAAATATTGGTGAAAAGCTTTAATATTTTCTAGTTAGAAAAAATAAAAGAATTATATTAGATGACAAAAGAATTTAGAAAAAGCATTGTATAACATTTTTTTTTGTAATTAATGATATCGACAATAAAAAAATCTATCAAAAGGTCATGAGAGAGTTATTAGAGAGTTATTAGAGGTTACTTGTTTCTAAATTTGTTATTTTTACCATTTAAGATTCTATTATATATATATATATATATATATATATATATATATATTTTGTTATTTTTACCAACTCCAAAAAATAATTGTGTACTTATTTGTATTTAAAATAATTTTTATATGAACTTTTGGTCACTGTTACAAAGTTGGGAGTTTGTCACTATTACCACCACCAACCATATATTTAATGCAAACTATAGATGTTACCATCATAAAGTTAACAACTCGAAATTAATTTTATTGAAAGTTAACAACTCGAAATTAATTTTATTGAAAAGTTTAAGCCAAAACAGAGAAGTTGGTATAGAAGTGAGGTGCTCACATTCCACTTTATGAGGCTATAAAAAGTTGTTTTGAAGGTGCGGCAAATAGAAACCTATCCCTCATTTCTATATCAAAAGAAGAAAAATAATGAAAAATCTTGGGTTCACAAGTCTTCCCCTTTGGTGGTGGCAATGGCGGCCCTCATAACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCACCACCGTCCACCACTTGTTGCAGTAAGCTGAGGGAGCAACAGCCATGCTTTTGTCAGTATATGAAGAATCCAAGCTTGGGAGGTTACGTGAAATCTGCTCGAGCAAAAGCTATTATTTCCTCCTGTGGTGTTCCCTATCCCAAATGCTAGAGGTCATGCTTTGTAATGGACTTTTCTTATATATATATATATATATATATATATATATATATATATAGCCTATACTACAATATCAAACGACTATCAATAAAAAGGAAAGTGATCTGGTATTTTCTTTGTTCTATATGCTTCAATTTTTATCATTATACAAATATGTAATGGCATTACTATAAAAGAATGTGAAATATATCTAGAGAAGTAAAAGACGTGGAATTAACTTTTTCATTTGGATCGTATATAGTGCAGCCCAATCAACTCTTGAATAAAAACTGGCACATGATTATTTGTATTAATTAATGGACTAAATTAATTAATAACACAACCCAAGCATAATGCAATAGCCATAAAATACACAAAGCATAAGAGAATAAAAACACAAGGATATAAAGTGGTTTGACTAATTTGGTCTACATCCACATTGAGAACCAGTTTTGAGAAATTTTATTAAGAGTATTCGAGTTACAAATTCACTACAAAAAATGAGGGGTCTTCCAACGCACACAATCGTTGGGAGATATACGAAAAAAGAGTTGTAAAAGGATCTCCCAAAAAAATGTCTGTCAAAACTGTGCTCTGATAAAATGTATCAAAAGAAACCTTTACGACACTAAGAAATGCAGCGTCGGGAAGATACTGTATACGATGTTGGGAGTTCGCATCTTTAGTCGTCGGGAGATCTTATATACAAGTCTCGACGCTTACATATGGCATCGCGGGTTTGATTTTTTTTTAAAAAAAATACCTTATATTATTTATTTCATTTTATTTTTTGTAACCTCAAATTTTGAACCCATTTATATATATATGAACATTTTCACGAACGTACATATTTCTATTAAAGAACAACTTCTTAATTACTATTAAATAACAACTTCTTAATTACATCAATAATATATATATATAATAAAGGAAGATTCAACATTATCACATGATTAGGAAATGCATGAGCAGGCAGATCCGGTTTAGGAAATATATCCGTCAATGGAGTTACGAGAATGAGTGAAAAGTAATTTTGGCATCCCTTGAAAACGGGAACATCGTGCTAGCCATGCGTGAAATTATGTAGAATAGATAAGTCGGTATAACACATTTGTGGGAAAGAATAGAAAGAATATGTATAATATAGGTATAGGAAAGTTTCAATTCAAATGTGTAAACAAGACAATGCGTTCAATTGATTTGAGATTTTCAAAACCATAGGCCAAATCCAACAAAATACAAGCGTTTAACTTATCAAAGAAAAACCTCTCAGAAACACCTTTTTGTCTATACGAAGGTAAGAGAACTATATGCAGCAATTAAAAGTAAAACCTAATAAATCTAAGAGGAATAAAGAATTGATCATTACAGAGAATGTTGAATGATTATAATAGTAGGAGAGTTTGAACCCTTTTAGACAAAGAAATACTTGCGCTTATACAAAATGAGGGAGGAGAAGTGAAAGGCAACCTTGACCCCCAAATAAGGGCTAAAGTGATTGTGATTATAAACAGAGAACCCCCTTTCCCAACATAACATAAGAATGTATCATGTTGGGAATGCACAAAATCTGGTACATGCATTGTTCAACAGAAAACTTGGACAATCTTCTAAGTTTTAGATCCAGCCACATAAGTTAAAAGTAGTTCGGACGGCCGTATAGTTGTCCACATAAAATATCTCCGTCTTTATACGTATGGTTGAAAATTTTGATGATGACAACAAGAAAGAAAAGAGAAAAAAGAAAGTCAAATAGAACAGATTCAATGTTGGTGGAATTTTTAGCCTCTGCTTCAAAATTCTATTTTTTCTCTAAATTTAAACAACTTTGGGCCATTTGACAAAGTGAGTGAGATCCCTCTTGGACGGCAATGCTCCACTGATTCCAAACTGCTTGGGACGCTTCTAAAGTAGTGGGTTTTACCACCTTTTGCTGCAAAGAATCCAAAGCGGTGTTAAACCAAAGCAATAAAGAATTGAAACAATAAATTTCACATAAGAATATGTTCGAAAACGAAGTAGGGCTAGATGTAGTGGAATTCTCCGTTGCGCGTAGCTGCTGTTGAAGATTCGAATCAATCTGCCTTCGTCTACATCTGTTGTCCGTTTACGAGTTGCAAGCCAACCCACACGCATATCTATTTTGCACAATCTCTTTTGTGTTGGTTTCGAAAGCCGTTGTTTCTACCTTGTCGTGGTTTGTGGTAAGGGTGTAGTTTTGGGTTTTGGTGATTGTTTTCAATAACCAATATTGGTTGGGTTAGTAAATTGATTGATATTGTTTCTTGAAGGTGCAAATTGTGGACAACACTTAAATTCCTTGAGTTTCAAGTGAGTGGGGTTGGACTCCAATTCTCCACGTTTTGGGTAAGTTGTGGAAATTATATATATAGGATGAATTGAATAGATGAAATTGTTTCTAGAAGTCATTGATTTCTGTTTACTTATGTTTAGGTTGTTTTTGTTGAACTTTAGTGGAATAAATGAAGTTAAGGTAAGGGTTCCTACTACTGGACTCAATGATGAAATTAAGATGTATTGACTATATGGATTCCACTAAACTTAGATGGACTAACTGATAAGCAAATTTATATTTGATGACTGTTTATTATATAAATTTTATTGAACTGAGATGAGTTGACCGATATGTAAAATATAGTTTGATGACTGAACTGAGGATATCGAATTGATTAGATTGTGGGTTGTTGACGGTTATGTTAAGGCATAGGTAGTGTAATGTAGGTTGAATTGACAAACTAGATTGAATTGACTGAACTAAGGTGAGTGACGCTTATGTATAAATTTAATTATTTGAGGGACTGTTCTGCTGATGTTTGATTATGTATTGGTTTGGGTAAATTAACTGTATATGTGTTGAGCTGAAAGAAGGATATAATGGTAGTTTATATTCTAAGTTGAGTTGACTGTTTTAAATGTTAGTATGGACTGAGGGAAATCTGTTAGCTTTATCTGTAGGGTAGTGTGTCTTGCAGGTGCCCCACGGGATCACCACCTGTTGTGCATCATTTGGAACACTAGACTGATAGGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCTTTTATGAGCATTAGATTAATTATGTGCACCCTACGGGATCACAAGACTGTTATGATACATGGTACCTCCCAATAGAAAGTTAATAATTTTACCCTAGTGGGACCAGTAGTGGGTCTCTTGCTGGGTATGTTTATACTCACCCTTTTATGTTTAACTTTCCAGGCAAAAGTAATATAAGAGACCGACCAACGAGGAATAAGAAGGAGACGTGATCGCCATAGGAGGATTTTCTTTAAAATAGCTTCCGCTTACAGTTTTCTTTTGTTTTACTTTAGTAGTTGTGACTGAAACGAATTTCATGTTTAGCACAACAGTTTATTTCTTGATTTTATAAACAATAATTTCGAACCTTTAATTTTGTTTGAAATAGGGCCTGAATAAAGATTTATTTGATGTTTATTGATTTTAACATATTTTATAAACACTCATGTTTAAAAGAAGTGCATTTGTATTAAAGGAACTACCTCAGTTTAGTTTGAAAAGTTTGGATCGTTACACCTAGCCATCCACCCAATCTTACTCTTAAAATGGGAGGCTTATTGTGTCAGTGTCGTTGAGCTACACTCACCTATGCAGATCTAAGGATAATTTTGTGTGAACATAAGTTCATAGTTAACTTAGGATTAAGATTAAGTTACATGGGTCATCAATAAACAAAATAGTCAGTTTTGTACAATCAATGGTGTTATAACTTAAAAGTGATTATTTTATGATTTCAGTCTTATGCAAACTTTGTACATAGGATACTCCAACTTCCATGGTCTCTACATGAACGATTCAGGATCATATCGTTTGTACTAACTACAACAAGAATAAGGCTTATTCATACACTATAGACCATTTGGGCTATATACTTGAACTTGATCCACATTTATGTAAATTCAAGTCTACACTAGGTAGCATAAGGACCTTAGTTTATTTAGATTCAAGATTATAGTATTCTATTAATAAGTCCTCAATAACCACTTTATTGAATAAAATATACTTTTAAACTACAAACTACGAGTTTTATGACATAAATTTCAACAGCTTTGTCATTTAATGATCCATCTCATCTAACTCCTTTCATTAAAATACCTTACTTTACTCACCATGATATTTCATTCTCTATAAATTGTGTTAGTCAATTGATGCACAAACCCACTGTTATTCACTTCTCTGCAATCAAATGCATCCTACGATATCTATGTGGTACTCAACCCTTGGGATAAAATTTTGCATGGGTTCATTAATTATATCTATAAACCTTTTAATGACTCTGATTGTGCTAGCGACACTTCTGATCGACATTCCACCTCTGGATTCATTGTCTTTCTTGGTTCTAATCCTATCTATTGGTCTTTTAGAAAGCAACCTACAGTCTATCGTTCTTCCACATAAGCAAAAACTTGCTCACTCGCCACTACCACTGCAGATCTTTACTGGAACCGACAAGTTCTATGTGATCTTCATGTTCCACTTTAAATCTTCAACAACCTTATGGTGTGATAATGTTTTAGCTATATCTCAGGTTCATAATCTCGTGTTTCATGCTCGTACCGAACATATTGAAATTGATTACCACTTTTTTCAAGAGAAGGTACTTCGCAAAGACATCTTCATTCGTTACATTATCTCTTCCAACGATCAACTTGTTGATCTACAAACAAAGTCACTCTCATCTACAACACTTCTACAACTCCGAGACAAACTATTGACTCATTTTGAGTCATCAATCTGAGGGAGGATATTAGAGGATATTTTCCAAAATCACAATCCTCTTCATAATCTACTCCTCAATTTCTGCCCTTTATTTTTGCCCAAATTGTATATTTGATTATATCCCAATCTTTTCATATTTAATATTATCTTGTATTGCATATTTATACCAAACCATTGTAAAAAGAAATAAAAACAAGCAAAATATATTCGTCTCTAATTCCTTTTATGATTTAGGATAATTCAAAAAAATGTTAAAATAATTGTGGTAATTTTTGTGCTCTAGAATAGATCAAACGTGTAGAGCAACCCAACATTTAAATCAATGCCAACAATATTTGTTAATTGTTATCATCACAATATTAACTTTATGGAAAAGGATGTTGGAAGCAATTAAAATCAAAGAGAAAAGTAGGTGAAATTGGAAATGAGAAATTAATAATAGGGTTGGCCCTTTTATCAACTCTTCCAACTTTATGTGGCTATAAATACAAACAAAAAAGAGTTGGGGGGAAAAACAGACAATTAAAGCCATATTATTCCTCTTTCTCCTTTTCCTTTTCCCTTTCCCTTCAACAAACATTACTGATTTCTATCAAAACCAAGAGACAATGAACAAAGTTCTTCCAGTCACAGTTGTTTGTCTTTTCGTGCTGGCCGTTCTTGGCGGAGTTCGTGTTGCAGAGGCGGTGAGTTGCAGCCCTTCGGAGCTGAGCTCATGTCTCACGGCAATCACGTCGATGGCAGACCCATCCGCCACTTGCTGCAACAAATTGAGAGAGCAGCAACCATGTCTTTGCGGGTACATAAAGAACCCAGCTTTGAGTAGTTATTTGAATTCTCCTCGCGCCAAACATGTTGCTTCCAAATGTGGTGTTCCCACTCCAAGGTGTTAGAGGGTCTTTCTTTTGGGCCATATGTGTGGAAATTAAGCTGGAATAATTTTATAGTTATTCCTATGAATAAAACAATAAAAGAAAAAAACGATCTATGTGTTTCTTTTTTTTTTTTAATTAAGTTATTAAAGTAGGTTCATGTTGATCATATATCTCTTTTCTTTTTTCTTTTAATGAATTAAAATAATAGGTATGGTATGTTTCTATAAAGATATTTTTAGATTGGTGTTTTCTTTGTTAAATGTTTCACCTTTTTTCTCTTTTTTAGGTTGCTGTAAAGTAAAATTGAACAATATCTTGGTGATGATTAGGTTGCAAATATCTTTATCTCTCCAACTTACATAGTTTTTCAACAAAAAAAAAAAAATTTGTTAGGGGAAGATTTTTGCTTTTTATTAAAACTTACTAGATTTTTTCATGCTGTCTTTTATAAAAAGAAAAATTGCAAAAATATTTCCAAATAAGTTTGACAACACTATTTTTTTTTGCATACTTCAAATATGACAAAGTTAATGATATCAGACTACTATTAAACGATAATCATCGGTAATCTAGAGTTGTTGTTGGAGTTGTTGCAGGACTAATAGACAGTAATTGTATGACAGTAGACAGTAATTGTATGACAGTAGACAGTCATCCCTTCTAAATTAATTTGCAAATTTTGTAAATTTAAAAAATTTTATAATTTTGTAAATTAATTTGCAAATTTTGTAAATTTAAAAAATCTTATAATTTTGTAAATTTAAAAAATCTTATGACATGATTTCTATTATCATACATTTTTGCTATTTTTACAAAACTCCATATAAAGATATACAAAAATAAGTAAGTCTTCTCGTTGTTGATTAAGATATGTAAAGAGTTGGAACTAAACGTTGTTGATTAAGATATGTAAAGAGTGGATTTACTTTAGTTCTATTAACCTGGTTTGTTAGTTTTGGTTAGTTTTTATGAATTAGTTTTGGTTAGTTTTTATGAATTTAAATTTAATCAAAGTAGATTTTTAAAAATTTGGAAAGATATTTTGTAATTTTGTTGTATAAAGTATAAATAGGTATAGGTTCTTTGAAAGGTAAATAGTTTATATAAAAAGAACCCTTAAAACAAGAATCCTTAAAATTTGAATTATAGATTGTATCATAACCATATTCATATTCAAATAGTTTATATAAAAAGAACCCTTAAAATTTGAATTATAGATTGTATCATAACCATATTACGAATGCAGTTTGTTTTTAAATATACTAAAATAAACAAAAAAAAAAAAAAAAACTTTTGTATAGATTACATTATACTATTATTAATAGTATATCACTCGATGTGATATTTTACTAATATTTTTCTAAATACTTTTAGTATGGTGCCCTTCTTCGCATCAATTAAACGTTTCTAGACATCTTTATAAACAAATCAATTTAGATATTCTATTACTTTGTTTAACAAAATCCATACATGAACTCCTACTTATTTATTTGATAAATTTAACATTTAAATTCTATTTCGAGAGTGGAAGATTTAAACACATGGATAATTTATTTAATCTTAATAAAGGATATAAATAATTTCTGTTATTATAATTTAAGATTAACATAAACAATTATATGTTTCATGCAACTTTGATCAAAATTCAAATCTTAAAAGTAGTGTCAATTGAAATTTTTACAGAAGTTAAAGATTAAATCATATATAATTATTAATTTAGATTTAAATAAATAAAATATATAAAAGGAAGAGGTAAATTAAAAAATTTCCCCTTATATTTATATGTATAGATGAATCATGAATTGAAAGGGAAGAATTTGAATTCAAAGTGTCTTAATTGAGAGGATTGGTTGTGGGGCTGTGAGTGACAAATGTTATATGTTTTAGGACAGCTGGTTGATCCATCTTTATTCATTTGACATGTTGGATCTTCTCTTACTTACTTACTCATGTATGTTTTGATGATACTATTGGCACTGGCCCAGACTCCTCTTATATTTCTCTTCTAAAAACCAATTGGCACTTGAATTTAAAATATCTGATCTTGGTTCTTTAAAGTATTTTCTTGGTCTCGAAATACAATTCTCCACTAATGGCATTTTTGTCAACCAAACACATTGAGATTGATTCCCATTTTGTTCGGGAAAAAGTTCTTCGTAAAGACATCTCTGTTCGACGCATCTCCTCCAACAAACAACTTGTTGATATACTCACAAAAGCTACTTCTGTCTCTCATATTTCTTCACCTTTGAAATAACTACTAACTCCCTCTGAATCTTTGGTTTGAGGTGGGATATTAGGAAATAATATCATATTACAAAATCTACTCCTATAATCCCTCTATTTGTTGTAAATTGATTTGTAATTATTTTTTACCATATTTGTATCTTCAAGCATTGTATAAATATTCATTTTGATCAATGAAAATAGCAACCAAATTCAATACAATTCATTGGTATTTTACATGAAGGAGAGAGAAATGAATAGGAAATGCAAGAAAGCGGAATGGGAGGAGGACGAGGCCACAAAGTTGGCAATAAAGAAAGATGTAGAAATCGTTGATGCACAATCCATAAAACCCAGACTTTAGCTTTAGGGAAATTGTTGTTGTTGTCCAAGTCATCCAAATGGATATCGGTTGTTGCTACCCAAGTCACCGCCACTCCATCTGATCGATTCCCTCCATTCATTGGTTGCAATTTGTTCATCTACAGATGGATGTGTTGTGTGAGGAAGAAATTGTGGGTTTCAAAATTTTAGAGCTTTTTTAAACTAAAGGATAATTTAGATATTTCACATATCCATTTGTCCCAAGACTCTTCTTTTCAAAATTTGGTCTCATTATCAAATTTGTACTGTTTTTGCCAATTAATCAAAATTTAATTAATGCCTAAAACTTTAAACACTAATCAAAATTTAATCAATGTTCAATTATCATCATCGAAACACAGATAAATGAATGTTAATTAACATAATTAAATGCATGATAAAGTCAAACAAGTAAATTGTCACCATTTTGTTTGCTAATTTTATGTTTTTTAATCATAAGTGTTAGGTAACAAAATTCGTTGCCACATTTGTAAACTATATCAATCAAAAAATTTAATAATTTGTAACTATGTTATTTTTAGGATTTTTCTTTTTATCTATCAAACAGTTTCTGATAGACCATTTTAATAGTCCATTACTGTTAATACACGAAATTGTTTTTGCATATATTGATTGATAAACAGTTTGTAGGATTATCATTATTGAGAGGTATCTATCATGTATCAACCACTTTAATATATTTGTGAATTAACAATATATATTTTACAAGGGGAATTTTACATAAATAAAAAAATTGAAAGTATTTACGTTATATGTCAAAAAAACGAAGCTTAGGACACGTAATTTTCACTTTTTGAAATTTTCAAAAATACCTTTTAACATATTTAAATCTTCACACGACGATTACTCGATTCTCAGATATCTTCCATCTAGAGAGTTTTTAACGTGTTGTTCCTAGTTGATTGTCATCTCTCTTTCTTTTACAATCATCGAGAGATTTTGATCACCAATGACACTATTTGTACATCATTGATGTTTCAATCACCCAGACCCCATTCTCAGGTCTCGTCATGTGATTAAGTGAAGGTGTGACCACCTAGACATTGATCAATGTCTATCTAACCATGTCATAATGCGTTGGGCATCTAGTAAGCGAAATTTTATGACAACTAATTCACTTGTTTAACTCGTGCGGAAGAGTTTGTGGTAACTTAAAGTATTGAATAGGAGGTGTGGTAACTTAACTTGTTGCACACATTTACTCCCTATGAGAGGCTATAAAAAGGAGAGGTTGAAAGCATCAGCAAAAGCACAGAAACACACAAATTCGTTATTCCTCCCTTCCTCGTAACACAATCAAATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAG

mRNA sequence

ATGTGCAATCTTAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAG

Coding sequence (CDS)

ATGTGCAATCTTAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAG

Protein sequence

MCNLNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK*

Homology

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BLAST of CsaV3_4G010450.1 vs. NCBI nr
Match: KAE8649342.1 (hypothetical protein Csa_014385 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MCNLNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNK 60
           MCNLNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNK
Sbjct: 1   MCNLNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNK 60

Query: 61  LREAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 106
           LREAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 61  LREAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 105

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BLAST of CsaV3_4G010450.1 vs. NCBI nr
Match: KAE8648021.1 (hypothetical protein Csa_005848 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 9.0e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 64
           NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA
Sbjct: 3   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 62

Query: 65  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 106
           QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 63  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 103

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BLAST of CsaV3_4G010450.1 vs. NCBI nr
Match: XP_008444079.1 (PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA0064163.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa] >TYK02866.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLRE 64
           NFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KLR 
Sbjct: 3   NFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKLRA 62

Query: 65  AQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 104
            QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 63  EQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

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BLAST of CsaV3_4G010450.1 vs. NCBI nr
Match: KAG6581747.1 (hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 6   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKLREA 65
           F IT VVC FV    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKLRE 
Sbjct: 4   FGIT-VVCFFV----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQ 63

Query: 66  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 104
           QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 64  QPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 97

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BLAST of CsaV3_4G010450.1 vs. NCBI nr
Match: KAG7026200.1 (hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-21
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 6   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKLREA 65
           F IT VVC F+    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKLRE 
Sbjct: 4   FGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKLREQ 63

Query: 66  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 104
           QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 64  QPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 97

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BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.1e-13
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 11 VVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYC 70
          VVC  VV     +  G  PV   V C+P++LSSC  A   G  PS TCC+KL+  +PC C
Sbjct: 11 VVCAVVVVALFLIDVG--PVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLC 70

Query: 71 EYINDPDLRSFVNSSAARRIAKSCNISLP 99
           YI +P L+ +VNS  A+++  +C ++ P
Sbjct: 71 NYIKNPSLKQYVNSPGAKKVLSNCGVTYP 97

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-12
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 36 CDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKSCN 95
          C   QLS C AA    T PS  CCNKL+E +PC C Y+ DP+L+++VNS  AR+ A SC 
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 96 ISL 98
          ++L
Sbjct: 63 VAL 65

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-11
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 34 VECDPSQLSSCTAAFFGMTPS-QTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKS 93
          V C P QLS C        PS  TCC KLRE +PC C Y+ +P LR +VNS  AR++A +
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 94 CNISLP 99
          C + +P
Sbjct: 61 CGVPVP 66

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 10  IVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCY 69
           + V +  VA  VA   G    VA   C+  QL+ CT A   G  P+  CC+ LR  Q C+
Sbjct: 5   LAVLVLAVA-MVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCF 64

Query: 70  CEYINDPDLRSFVNSSAARRIAKSCNISLPT 100
           C++  DP    +VNS  AR+   SC I+LPT
Sbjct: 65  CQFAKDPRYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-09
Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 10  IVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCY 69
           + V +  VA  VA   G    VA   C+  QL+ C  A   G  P+  CC+ LR  Q C+
Sbjct: 5   LAVLVLAVA-MVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCF 64

Query: 70  CEYINDPDLRSFVNSSAARRIAKSCNISLPT 100
           C++  DP    +VNS  AR+   SC I+LPT
Sbjct: 65  CQFAKDPRYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL
Match: A0A0A0KZL4 (Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa_4G146240 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.3e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 64
           NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA
Sbjct: 3   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 62

Query: 65  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 106
           QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 63  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 103

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL
Match: A0A5A7V7R4 (Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00730 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.3e-33
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLRE 64
           NFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KLR 
Sbjct: 3   NFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKLRA 62

Query: 65  AQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 104
            QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 63  EQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL
Match: A0A1S3BAC3 (non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487519 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.3e-33
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLRE 64
           NFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KLR 
Sbjct: 3   NFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKLRA 62

Query: 65  AQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 104
            QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 63  EQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL
Match: A0A6P4DCV5 (non-specific lipid-transfer protein 2 OS=Arachis duranensis OX=130453 GN=LOC107489887 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-14
Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 16  VVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLREAQPCYCEYIND 75
           V  T V   +  PP      C  S+LS CT  F FG TP+ TCC KL++ QPC+C Y+ D
Sbjct: 25  VPPTLVKAQSPPPPPSPTPNCSVSELSECTIPFAFGSTPTPTCCAKLKQQQPCFCVYLKD 84

Query: 76  PDLRSFVNSSAARRIAKSCNISLPT 100
           P L  +VNSS AR+IA SCN++ PT
Sbjct: 85  PSLAQYVNSSNARKIAASCNVTYPT 109

[Close]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13
Identity = 47/95 (49.47%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 6   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKLREA 65
           FPITI      +A  VALL+GA  V   V C P +LSSC  A     TPS TCCNKLRE 
Sbjct: 4   FPITI--AFLFMAVMVALLSGA-RVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 63

Query: 66  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 100
           +PC C YI +P LR +V S  AR++A  C +  P+
Sbjct: 64  KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPS 95

[Close]

BLAST of CsaV3_4G010450.1 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-15
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 11  VVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYC 70
           V+ + V+A   A+L    PV   V C P QL+SC AA    + PS+ CC KLRE QPC C
Sbjct: 4   VMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLC 63

Query: 71  EYINDPDLRSFVNSSAARRIAKSCNISLPT 100
            Y+ +P LR +V+S  AR+++ SC I  P+
Sbjct: 64  GYMRNPTLRQYVSSPNARKVSNSCKIPSPS 93

[Close]

BLAST of CsaV3_4G010450.1 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-13
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 9  TIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSC-TAAFFGMTPSQTCCNKLREAQPC 68
          T +V +F +A  + ++    P    V C P QLS C TA      PS  CC KL+E +PC
Sbjct: 6  TTMVSLFALAAVLLMI--LAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPC 65

Query: 69 YCEYINDPDLRSFVNSSAARRIAKSCNISLP 99
           C Y+ +P LR FV++  AR+++KSC + +P
Sbjct: 66 LCGYMRNPSLRRFVSTPNARKVSKSCKLPIP 94

[Close]

BLAST of CsaV3_4G010450.1 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-12
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 6   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSC-TAAFFGMTPSQTCCNKLREA 65
           F + ++V    +  T   L+G     A V CD  QLSSC T    G+ PS  CC KL+E 
Sbjct: 11  FVVGVMVSPVSIRATEVKLSGGE---ADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQ 70

Query: 66  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 100
           QPC+C YI DP    +V S+ A++   +C +  PT
Sbjct: 71  QPCFCTYIKDPRYSQYVGSANAKKTLATCGVPYPT 102

[Close]

BLAST of CsaV3_4G010450.1 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 14 IFVVATTVALLNGAPP--VVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCE 73
          +F   T + +L  A    V A   C+P+QLS C      G  PS  CC+K++E Q C C+
Sbjct: 9  VFFTCTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQ 68

Query: 74 YINDPDLRSFVNSSAARRIAKSCNISLP 99
          Y+ +P+ +SF+NS  A+ IA  C+   P
Sbjct: 69 YLKNPNFKSFLNSPNAKIIATDCHCPYP 96

[Close]

BLAST of CsaV3_4G010450.1 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 10  IVVCIFVVATTVALLNGAPPVV------AQVECDPSQLSSC-TAAFFGMTPSQTCCNKLR 69
           +V  +FV+ T ++ +     VV        V CD +QLSSC TA   G  PS  CC KL+
Sbjct: 6   VVFILFVLGTMLSPVPVKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLK 65

Query: 70  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 100
           E + C C YI +P   S+V S  AR+   +C+++ PT
Sbjct: 66  EHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPT 102

The following BLAST results are available for this feature:

BLAST of CsaV3_4G010450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649342.1	2.5e-52	100.00	hypothetical protein Csa_014385 [Cucumis sativus]	[more]
KAE8648021.1	9.0e-50	100.00	hypothetical protein Csa_005848 [Cucumis sativus]	[more]
XP_008444079.1	1.3e-32	72.00	PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA006416...	[more]
KAG6581747.1	2.3e-21	60.61	hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7026200.1	5.1e-21	59.60	hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_4G010450.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	3.1e-13	41.57	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	5.9e-12	50.79	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82353	2.2e-11	46.97	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
Q10ST8	1.6e-09	39.56	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2XBN5	3.6e-09	38.46	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CsaV3_4G010450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZL4	4.3e-50	100.00	Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7V7R4	6.3e-33	72.00	Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BAC3	6.3e-33	72.00	non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487...	[more]
A0A6P4DCV5	5.0e-14	49.41	non-specific lipid-transfer protein 2 OS=Arachis duranensis OX=130453 GN=LOC1074...	[more]
A0A6J1GTR0	1.5e-13	49.47	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsaV3_4G010450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48750.1	2.6e-15	44.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	9.3e-13	39.56	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	2.7e-12	38.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.9e-10	37.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	1.9e-10	38.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..103 e-value: 0.0018 score: 27.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 18..103 e-value: 1.1E-7 score: 31.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 34..100 e-value: 1.2E-20 score: 75.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 35..99
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 12..99
None	No IPR available	PANTHER	PTHR33214:SF44	LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATED	coord: 12..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G010450	CsaV3_4G010450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G010450.1.exon1	CsaV3_4G010450.1.exon1	exon
CsaV3_4G010450.1.exon2	CsaV3_4G010450.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G010450.1.cds1	CsaV3_4G010450.1.cds1	CDS
CsaV3_4G010450.1.cds2	CsaV3_4G010450.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G010450.1	CsaV3_4G010450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport