CsaV3_4G008910.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G008910.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	F-box domain-containing protein
Location	chr4: 6417839 .. 6420611 (-)
Sequence length	912
RNA-Seq Expression	CsaV3_4G008910.1
Synteny	CsaV3_4G008910.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCTTAAGGCCTAAAACAACAAGAGCCCTAGCATAGCAAACTTGCTCTTTAAGTTTTCTCAAACAAAGAAGAGGAAACTTTAACTTACTTGAATCTAAACCTCACGTTCTACCTCTTCGGTCTCGCCAAATACTACAACTATCATGTAGGTTCTTGACCAAATGTCGGTTTGGACGAACCACACTCTTATTTTAGCTTCAACTCTAGCATAGAATATCGATATAGATAAATGGGGCAGATTTTGGAGAAGGTGGACCGAAGGCTATTAATTTTCGAAACCACCTTATTTTTCTAATAATAAGTTTACGAAACTGTAGTTTATAAATAGAACCTCCTCTATTTTGTCCTCCTTTCAAAATTAAACTTTTTCCTCACTCTTTCTCCCTCTTGATTTTGAAGAAACTCAGCGTTGCAGATTCCAAATCTTTGATTTTCGGTAATCTTAGAACTGCTTCATCCTTTTCACCTCTACTTTTCTGTGTTTTCTTTGCTTTTTTCCCCTTTATTCTACGACCCTCTTATGCTTCTTCTTCTTCCTTTAGCTGTGTAAATACACATCGCACAACAAATTTTGTTGAAATCACATATATATTCTTTGTTTTTACGATTCGTTTTAGGAGTTCGAGTTTTTGTTTTTGTTTTTTGTTTTTTAGCCATCTATACGGATTTCTCGTTAACCACTCCCAGATTTTAATACCCTGAGCCTATTTTTATTTTCAAAACTGTCTCTGATTGGTTGTTCACTCTAATTCTAGGCGTATGAATCTTTGTTTCTATCAATTTTGAGAACAATAATTGCTTCCTGTTGGGCTCCGCTATGAAATTCTTGCTGAAATTGGGATCAAAATGCTTAACTTGAAGGGTTTTACCCCCAAGGCCTGGAATAATTGACATCAGAACTGAGATGTGCCCCTTTCAATTTGCTCGAACTTTTTTCCATTGATTGTTTTATAGTGATGTTAAGAAGCACTAAACACGATGCTTATTCAAAAATTTTCTAGCTTCGTAGCTTTGGCATGACGTAGTTTTCATTTTCTTTTCTTTATCTTTTCATCTTTGTAAAGAAAAGCTAGTAATCTTTGATGGAGGATTGCGGTAGCCGACGCTGGGATGAGCTATTTCCTGATGCATTGGGTCTCATATTTAAGAATTTGTCACTCCAGGAGTTACTTGTTGTAATTCCAAGGGTTTGCAAATCATGGAGAGAAACAGTGTTGGGGCCTTACTGTTGGCAGGAGATAGACATTATGGATTGGAGCTTACTTCGAGATCCCGTTAGCGTTATTACAATGCTTCAATTGTTGATTTCAAGGAGCTCTGGTTACCTTCACAAGCTCTGCATTAGTTCTCTCCCTAATGACTCTAGTTTGTCCCTGATTGCAAAACAGTGAGTCCGATAATAACCCTATCTTCTTGTCCGCTTTTTTGATGCACGGTTGTTTTAGCTACTCACCTTTTATTATCGCAATTGAGATTTATCTTCCATTTTTTTAATATCACTGTTTAGGAATTATACTGTTTGGCCAAATGACTGCTAAAACTATGACTATCTCTGTTTCATTTTGGTCTTTTCTTTTAAGTGCTGTGCAATTGATTGGTCAAGTTTGACAGAAAAATGTTCTATATTGTTCTTTAGATGAGTGGAAAAAAATATAAACATTCATCTTCCAAGTTTAGAGTTTCAACCGGGAAGGTAACACAGAGTTTAAAGTGTCTACAGAGAAATTTGGAGTGAGGGTTGAAAACAATACAACCTCACAAGCTTGGGAGTCATGTACTAAGTTGTGTTTAAATTCGTGTATGCTTGAATGCGCCTATTTTCTGTAAATTAATATCTTACTTTCCTGATTGACAGTGGCAAAGCCCTTCATACTTTACGGGTACCAAGAAGCGAAATAACCAATTCAACTGTAGAACAGGTTGCTGACAAGCTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCACCAGCCCTTGAGGCAATTGGGAAGCATTGTGTGAATCTCATAGGGTTGCGTAGAGTTATGTGCCCTTTTGAAGCCATTGACAGGTCTTCTCAAGATGACGAGGCAATTGCAATTGCATCAACGATGCATAAGGTCAAGCAGCTTGAGATAGCCTATTTGCTTATCAATACTGAATCAGTTCTGAAAATCTTGGAGAACTGCCCACAGCTTGAGTATTTAGATGTGCAAGGGTGTTGGCATGTGATACTAGATGAGAGGTTCAAGAAGTTTTCGAAGGTGAAGTTGATCGGTCCACTGGAAGAGTTTTCGGAGACGATCAGATGGGATGGTTACTCAGATTCTTCTAGCTACTTGGTTTGGGAATTTGTGGCTGATGAATTAGATGATCAATTTGACATGCTGGAGTTTTTGGGAGAAGATTACACAAGTGTGGATGATGAGGAGCATGTTTATCCTGATTGGCTTGAGGAGTCTTCTTGAATCTTGCTTTTGCCTATCTTTGGCTACCATTTCAATGTCAAATCCGAGAGAAATGGTGACTTTGATTTCACTTAGTTAACCAAATAGTAGCAGCCCATGAAATTTGGTAACCATTATGGTTGGTTAATTTATCTATTCAAGATGCTTTCTCACATGGATATTTTTACTCTTATCTTCTTCTTTTGTTCTGTTTTTTTTTTGTTTTTTTTTTTTTCTCATGAATTAGGTCGATAGTTTTTTCTTGCAAGTAACTTTGTAAATTAGAATTTTTTTATGCAAGTAACCATTCAAATTAAATTAACATCTTTT

mRNA sequence

ATGGAGGATTGCGGTAGCCGACGCTGGGATGAGCTATTTCCTGATGCATTGGGTCTCATATTTAAGAATTTGTCACTCCAGGAGTTACTTGTTGTAATTCCAAGGGTTTGCAAATCATGGAGAGAAACAGTGTTGGGGCCTTACTGTTGGCAGGAGATAGACATTATGGATTGGAGCTTACTTCGAGATCCCGTTAGCGTTATTACAATGCTTCAATTGTTGATTTCAAGGAGCTCTGGTTACCTTCACAAGCTCTGCATTAGTTCTCTCCCTAATGACTCTAGTTTGTCCCTGATTGCAAAACATGGCAAAGCCCTTCATACTTTACGGGTACCAAGAAGCGAAATAACCAATTCAACTGTAGAACAGGTTGCTGACAAGCTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCACCAGCCCTTGAGGCAATTGGGAAGCATTGTGTGAATCTCATAGGGTTGCGTAGAGTTATGTGCCCTTTTGAAGCCATTGACAGGTCTTCTCAAGATGACGAGGCAATTGCAATTGCATCAACGATGCATAAGGTCAAGCAGCTTGAGATAGCCTATTTGCTTATCAATACTGAATCAGTTCTGAAAATCTTGGAGAACTGCCCACAGCTTGAGTATTTAGATGTGCAAGGGTGTTGGCATGTGATACTAGATGAGAGGTTCAAGAAGTTTTCGAAGGTGAAGTTGATCGGTCCACTGGAAGAGTTTTCGGAGACGATCAGATGGGATGGTTACTCAGATTCTTCTAGCTACTTGGTTTGGGAATTTGTGGCTGATGAATTAGATGATCAATTTGACATGCTGGAGTTTTTGGGAGAAGATTACACAAGTGTGGATGATGAGGAGCATGTTTATCCTGATTGGCTTGAGGAGTCTTCTTGA

Coding sequence (CDS)

ATGGAGGATTGCGGTAGCCGACGCTGGGATGAGCTATTTCCTGATGCATTGGGTCTCATATTTAAGAATTTGTCACTCCAGGAGTTACTTGTTGTAATTCCAAGGGTTTGCAAATCATGGAGAGAAACAGTGTTGGGGCCTTACTGTTGGCAGGAGATAGACATTATGGATTGGAGCTTACTTCGAGATCCCGTTAGCGTTATTACAATGCTTCAATTGTTGATTTCAAGGAGCTCTGGTTACCTTCACAAGCTCTGCATTAGTTCTCTCCCTAATGACTCTAGTTTGTCCCTGATTGCAAAACATGGCAAAGCCCTTCATACTTTACGGGTACCAAGAAGCGAAATAACCAATTCAACTGTAGAACAGGTTGCTGACAAGCTTTCTGCTGTAACTTTTTTGGATTTAAGCTTTTGTAAAAACATTGGAGCACCAGCCCTTGAGGCAATTGGGAAGCATTGTGTGAATCTCATAGGGTTGCGTAGAGTTATGTGCCCTTTTGAAGCCATTGACAGGTCTTCTCAAGATGACGAGGCAATTGCAATTGCATCAACGATGCATAAGGTCAAGCAGCTTGAGATAGCCTATTTGCTTATCAATACTGAATCAGTTCTGAAAATCTTGGAGAACTGCCCACAGCTTGAGTATTTAGATGTGCAAGGGTGTTGGCATGTGATACTAGATGAGAGGTTCAAGAAGTTTTCGAAGGTGAAGTTGATCGGTCCACTGGAAGAGTTTTCGGAGACGATCAGATGGGATGGTTACTCAGATTCTTCTAGCTACTTGGTTTGGGAATTTGTGGCTGATGAATTAGATGATCAATTTGACATGCTGGAGTTTTTGGGAGAAGATTACACAAGTGTGGATGATGAGGAGCATGTTTATCCTGATTGGCTTGAGGAGTCTTCTTGA

Protein sequence

MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSLLRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNSTVEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAIAIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLIGPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLEESS*

Homology

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BLAST of CsaV3_4G008910.1 vs. NCBI nr
Match: XP_004137189.1 (F-box protein FBW2 [Cucumis sativus] >XP_011653353.1 F-box protein FBW2 [Cucumis sativus] >KGN53651.1 hypothetical protein Csa_014850 [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 3.1e-172
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST
Sbjct: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI
Sbjct: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI
Sbjct: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE 300
           GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE
Sbjct: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE 300

Query: 301 ESS 304
           ESS
Sbjct: 301 ESS 303

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BLAST of CsaV3_4G008910.1 vs. NCBI nr
Match: XP_008455631.1 (PREDICTED: F-box protein FBW2-like [Cucumis melo] >XP_008455634.1 PREDICTED: F-box protein FBW2-like [Cucumis melo] >XP_016901768.1 PREDICTED: F-box protein FBW2-like [Cucumis melo] >XP_016901769.1 PREDICTED: F-box protein FBW2-like [Cucumis melo] >XP_016901770.1 PREDICTED: F-box protein FBW2-like [Cucumis melo] >TYK08783.1 F-box protein FBW2-like [Cucumis melo var. makuwa])

HSP 1 Score: 572.0 bits (1473), Expect = 3.0e-159
Identity = 283/307 (92.18%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQE+LVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRD VSV TMLQLLISRSSGYL KLCISSLPNDSSLSLIAK+GK LHTLRVPRSEITNST
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVAD+LSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTM K+K+LEIAYLL+NTESVLKILENCP+LEYLDVQGCW+VILDERFKKFSKVKLI
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSE IRWDG SDSSSYL+W+FVADELDDQFDMLEFLGEDYTSVDD     EEHVY
Sbjct: 241 GPLEEFSEMIRWDGCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFEEHVY 300

Query: 301 PDWLEES 303
           PDW EES
Sbjct: 301 PDWPEES 307

[Close]

BLAST of CsaV3_4G008910.1 vs. NCBI nr
Match: KAA0045315.1 (F-box protein FBW2-like [Cucumis melo var. makuwa])

HSP 1 Score: 567.4 bits (1461), Expect = 7.5e-158
Identity = 280/307 (91.21%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQE+LVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRD VSV TMLQLLISR+SGYL KLCISSLPNDSSLSLIAK+GK LHTLRVPRSEITNST
Sbjct: 61  LRDAVSVNTMLQLLISRTSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVAD+LSAVT LDLSFCKNIGAPALEA+GKHCVNLIGLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVADRLSAVTSLDLSFCKNIGAPALEAVGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTM K+K+LEIAYLL+NTESVLKILENCP+LEYLDVQGCW+VILDERFKKFSKVKLI
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSE IRWDG SDSSSYL+W+FVADELDDQFDMLEFLGEDYTSVDD     EEHVY
Sbjct: 241 GPLEEFSEMIRWDGCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFEEHVY 300

Query: 301 PDWLEES 303
           PDW EES
Sbjct: 301 PDWPEES 307

[Close]

BLAST of CsaV3_4G008910.1 vs. NCBI nr
Match: XP_038906234.1 (F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-like [Benincasa hispida])

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152
Identity = 269/307 (87.62%), Postives = 285/307 (92.83%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDC SRRWDELFPDALGLIFKNLSLQE+L+VIPRVCKSWR+TVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCDSRRWDELFPDALGLIFKNLSLQEILLVIPRVCKSWRKTVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRDP SV  MLQLLISRSSGYL KLCIS LPNDSSLSLIA+HGKALHTLRVPRSEITNS 
Sbjct: 61  LRDPDSVNKMLQLLISRSSGYLSKLCISCLPNDSSLSLIAEHGKALHTLRVPRSEITNSI 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVA++LSAVTFLDLSFCKNIGAPALEAIGKHC NL GLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVAERLSAVTFLDLSFCKNIGAPALEAIGKHCANLTGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           A+ASTMHK+KQLEIAYLLINTESVLKILENCP+LEYLDVQGCW+VILDE+FKKFSKVKL+
Sbjct: 181 AVASTMHKLKQLEIAYLLINTESVLKILENCPELEYLDVQGCWNVILDEKFKKFSKVKLV 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSETIRWDG SDSS YL W+FV DE+DDQF MLEF GEDY SVDD     EEHVY
Sbjct: 241 GPLEEFSETIRWDGCSDSSGYLTWDFVVDEIDDQFQMLEFWGEDYRSVDDEEHSFEEHVY 300

Query: 301 PDWLEES 303
           PDWL+ S
Sbjct: 301 PDWLDGS 307

[Close]

BLAST of CsaV3_4G008910.1 vs. NCBI nr
Match: XP_023553120.1 (F-box protein FBW2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.0 bits (1273), Expect = 4.7e-136
Identity = 239/302 (79.14%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDC +R WDELFPDALGLIF+NLSLQE+LVVIPRVCKSWR+TVLGPYCWQEIDI+DWSL
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRDP ++  MLQ+LISR SG L KLC+S LPNDS LSLIA+HG ALHTLR+PRSEITNS 
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVA++ SAVTFLDLSFCKNIGA ALEAIGKHC NL GLRRVMCPFEA+D+SSQDDEA+
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           A+ASTMHK+K LEIAYLLINTESVLKILENCP LEYLDVQGCW+VI DE FKKFS+VKL+
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLKILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEFSETIRWD-----GYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVY 298
           GPLEE SE+ RWD      YS SS YL W+FVADELDD+F+MLEF G+DY SVDD +H Y
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGDDYRSVDDMDHAY 300

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot
Match: Q9ZPE4 (F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.7e-73
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 89/298 (29.87%), Postives = 141/298 (47.32%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           ME   S  W EL P+    I   L   E+L    +VC+SWR     P  W++ID+ +   
Sbjct: 11  MEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD 70

Query: 61  LRD-PVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPR-SEITN 120
           L D   ++  M +  + RS G L  + I        L+ IA     L +LR+ R S+IT+
Sbjct: 71  LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITD 130

Query: 121 STVEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDE 180
               +   KL  +  L+LS+C +    +L  +G+ C+N+  L+    P     +   DD+
Sbjct: 131 DGFVEAVVKL-PLEELELSYC-SFSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDD 190

Query: 181 AIAIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVIL--DERFKKFSK 240
           A+AIA TM K++ L++    ++   +  IL+NC  LE+LD++ C++V L  D + + F  
Sbjct: 191 ALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFES 250

Query: 241 VKL------------IGPLE-----EFSETIRWDGYSDSSSYLVWEFVADELD-DQFD 277
           VK+            IG  E     +FS+     G  D   Y  +   +D  D DQFD
Sbjct: 251 VKVVRHPNDSIHDIDIGSSEDEDPYDFSDIDLMSGDDDFEGYYDFSGASDFSDYDQFD 301

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.8e-20
Identity = 85/298 (28.52%), Postives = 137/298 (45.97%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDW-- 60
           ME+ GS  W  L P+ L  I   L++QEL      V KSW      PY W   D+  W  
Sbjct: 1   MEEDGS-DWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFD 60

Query: 61  -----SLLRDP---VSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLR 120
                + L  P     V  ML+ ++  S G L K+ +    +D +LS  A     L  L 
Sbjct: 61  SYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLA 120

Query: 121 VPRS-EITNSTVEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVM----- 180
           +  S  +T++++ ++A +  ++  LD+S+C  I    L  IG++C NL  L+R +     
Sbjct: 121 IRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSS 180

Query: 181 -----CPFEAIDRSSQ--DDEAIAIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYL 240
                 P E +D   Q  D EA AI   M  ++ LEI +  ++ + +  I E CP+LEYL
Sbjct: 181 RHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYL 240

Query: 241 DVQGCWHVILDERFKKFSKVKLIGPLEEFSETIRWDG-YSDSSSYLVWEFVADELDDQ 275
           D+ GC H+   +     S++K +  +++    +   G  + +  Y  W    +  D Q
Sbjct: 241 DLFGCVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQ 296

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17
Identity = 69/242 (28.51%), Postives = 115/242 (47.52%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS- 60
           M+D   R W EL       I   L   E+L    +VCK W      P  W++IDI + + 
Sbjct: 173 MKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRND 232

Query: 61  LLRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRS-EITN 120
                  + +M +  + RS G L ++ I     +  +  IA     L +L + R   IT+
Sbjct: 233 RAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITD 292

Query: 121 STVEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDE 180
             V +   K+  + +L++S+C   G  +L  IG+ C NL  L+    P      S  DD 
Sbjct: 293 EGVAKAVSKVPLLEYLEVSYCLFSG-ESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDN 352

Query: 181 AIAIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKK--FSK 239
           A AIA +M +++ L++    +  + +  IL+ CP LE+LD++ C+++ L    KK  F +
Sbjct: 353 AKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFER 412

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.6e-16
Identity = 69/224 (30.80%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 7   RRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSLLRDPVS 66
           R W EL P+    I   L   E+L    RVCKSWR     P  W++IDI     L + V 
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 67  VITMLQLLISR----SSGYLHKLCISSLPNDSSLSLIAKHGKALHTLR-VPRSEITNSTV 126
           +  +++ L  R    S G L ++ I  L N S L+ IA     L  L  V  + + +  V
Sbjct: 79  LFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGV 138

Query: 127 EQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAIA 186
            + A KL  +  LD+++  +I    L+ +G+ C NL  L ++ C     D    D  A+A
Sbjct: 139 VEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTL-KLNC---TGDVKCCDKVALA 198

Query: 187 IASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHV 226
           IA TM  ++ L++    ++   +  ILE CP L+ L +  C ++
Sbjct: 199 IAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNI 238

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL
Match: A0A0A0L0J6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G096100 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.5e-172
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST
Sbjct: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI
Sbjct: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI
Sbjct: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE 300
           GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE
Sbjct: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVYPDWLE 300

Query: 301 ESS 304
           ESS
Sbjct: 301 ESS 303

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL
Match: A0A1S4E0L3 (F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 283/307 (92.18%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQE+LVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRD VSV TMLQLLISRSSGYL KLCISSLPNDSSLSLIAK+GK LHTLRVPRSEITNST
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVAD+LSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTM K+K+LEIAYLL+NTESVLKILENCP+LEYLDVQGCW+VILDERFKKFSKVKLI
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSE IRWDG SDSSSYL+W+FVADELDDQFDMLEFLGEDYTSVDD     EEHVY
Sbjct: 241 GPLEEFSEMIRWDGCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFEEHVY 300

Query: 301 PDWLEES 303
           PDW EES
Sbjct: 301 PDWPEES 307

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL
Match: A0A5D3CAA0 (F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1300G00100 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 283/307 (92.18%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQE+LVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRD VSV TMLQLLISRSSGYL KLCISSLPNDSSLSLIAK+GK LHTLRVPRSEITNST
Sbjct: 61  LRDAVSVNTMLQLLISRSSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVAD+LSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVADRLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTM K+K+LEIAYLL+NTESVLKILENCP+LEYLDVQGCW+VILDERFKKFSKVKLI
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSE IRWDG SDSSSYL+W+FVADELDDQFDMLEFLGEDYTSVDD     EEHVY
Sbjct: 241 GPLEEFSEMIRWDGCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFEEHVY 300

Query: 301 PDWLEES 303
           PDW EES
Sbjct: 301 PDWPEES 307

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL
Match: A0A5A7TVA4 (F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00840 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.6e-158
Identity = 280/307 (91.21%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDCGSRRWDELFPDALGLIFKNLSLQE+LVVIPRVCKSWRETVLGPYCWQEIDIMDWSL
Sbjct: 1   MEDCGSRRWDELFPDALGLIFKNLSLQEILVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRD VSV TMLQLLISR+SGYL KLCISSLPNDSSLSLIAK+GK LHTLRVPRSEITNST
Sbjct: 61  LRDAVSVNTMLQLLISRTSGYLRKLCISSLPNDSSLSLIAKYGKVLHTLRVPRSEITNST 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVAD+LSAVT LDLSFCKNIGAPALEA+GKHCVNLIGLRRVMCPFEAIDRSSQDDEA+
Sbjct: 121 VEQVADRLSAVTSLDLSFCKNIGAPALEAVGKHCVNLIGLRRVMCPFEAIDRSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           AIASTM K+K+LEIAYLL+NTESVLKILENCP+LEYLDVQGCW+VILDERFKKFSKVKLI
Sbjct: 181 AIASTMRKLKRLEIAYLLVNTESVLKILENCPELEYLDVQGCWNVILDERFKKFSKVKLI 240

Query: 241 GPLEEFSETIRWDGYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDD-----EEHVY 300
           GPLEEFSE IRWDG SDSSSYL+W+FVADELDDQFDMLEFLGEDYTSVDD     EEHVY
Sbjct: 241 GPLEEFSEMIRWDGCSDSSSYLIWDFVADELDDQFDMLEFLGEDYTSVDDEEYAFEEHVY 300

Query: 301 PDWLEES 303
           PDW EES
Sbjct: 301 PDWPEES 307

[Close]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL
Match: A0A6J1EMK2 (F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 239/302 (79.14%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 1   MEDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWSL 60
           MEDC +R WDELFPDALGLIF+NLSLQE+LVVIPRVCKSWR+TVLGPYCWQEIDI+DWSL
Sbjct: 1   MEDCDNRHWDELFPDALGLIFRNLSLQEILVVIPRVCKSWRKTVLGPYCWQEIDILDWSL 60

Query: 61  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 120
           LRDP ++  MLQ+LISR SG L KLC+S LPNDS LSLIA+HG ALHTLR+PRSEITNS 
Sbjct: 61  LRDPDTINRMLQMLISRRSGSLCKLCVSCLPNDSCLSLIAEHGTALHTLRLPRSEITNSI 120

Query: 121 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 180
           VEQVA++ SAVTFLDLSFCKNIGA ALEAIGKHC NL GLRRVMCPFEA+D+SSQDDEA+
Sbjct: 121 VEQVAERFSAVTFLDLSFCKNIGASALEAIGKHCANLTGLRRVMCPFEALDKSSQDDEAL 180

Query: 181 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERFKKFSKVKLI 240
           A+ASTMHK+K LEIAYLLINTESVL+ILENCP LEYLDVQGCW+VI DE FKKFS+VKL+
Sbjct: 181 AVASTMHKLKHLEIAYLLINTESVLRILENCPDLEYLDVQGCWNVIPDETFKKFSRVKLV 240

Query: 241 GPLEEFSETIRWD-----GYSDSSSYLVWEFVADELDDQFDMLEFLGEDYTSVDDEEHVY 298
           GPLEE SE+ RWD      YS SS YL W+FVADELDD+F+MLEF GEDY SVDD +H Y
Sbjct: 241 GPLEEISESNRWDDFDCSNYSSSSGYLAWDFVADELDDEFEMLEFFGEDYRSVDDMDHAY 300

[Close]

BLAST of CsaV3_4G008910.1 vs. TAIR 10
Match: AT4G08980.1 (F-BOX WITH WD-40 2 )

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-74
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

[Close]

BLAST of CsaV3_4G008910.1 vs. TAIR 10
Match: AT4G08980.3 (F-BOX WITH WD-40 2 )

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-74
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

[Close]

BLAST of CsaV3_4G008910.1 vs. TAIR 10
Match: AT4G08980.2 (F-BOX WITH WD-40 2 )

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-74
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

[Close]

BLAST of CsaV3_4G008910.1 vs. TAIR 10
Match: AT4G08980.4 (F-BOX WITH WD-40 2 )

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-74
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

[Close]

BLAST of CsaV3_4G008910.1 vs. TAIR 10
Match: AT4G08980.5 (F-BOX WITH WD-40 2 )

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-74
Identity = 155/312 (49.68%), Postives = 200/312 (64.10%), Query Frame = 0


Query: 2   EDCGSRRWDELFPDALGLIFKNLSLQELLVVIPRVCKSWRETVLGPYCWQEIDIMDWS-L 61
           EDC  R WDEL PDALGLIF +L LQE+L V+PRVCK+W   V GPYCWQEIDI  WS  
Sbjct: 3   EDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNR 62

Query: 62  LRDPVSVITMLQLLISRSSGYLHKLCISSLPNDSSLSLIAKHGKALHTLRVPRSEITNST 121
                 +  ML++LI RS+G L KL ++ L NDS  S IA+H  +L TL+VPRS +TNS 
Sbjct: 63  FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSG 122

Query: 122 VEQVADKLSAVTFLDLSFCKNIGAPALEAIGKHCVNLIGLRRVMCPFEAIDRSSQDDEAI 181
           V  VA+KLS++TFLDLS+C  IG  A++AIGKHC +L    R M P +     S DDEA 
Sbjct: 123 VVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAY 182

Query: 182 AIASTMHKVKQLEIAYLLINTESVLKILENCPQLEYLDVQGCWHVILDERF--KKFSKVK 241
           AIA+TM K+K+LEIAY  ++TE VLKIL  C  LE+L+++GCW V LD +F  +KF  +K
Sbjct: 183 AIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMK 242

Query: 242 LIGP-LEEFSETIR-W-----DGYSDSSSYLVWEFVADELDDQFDMLEF-------LGED 297
           ++GP +  F + I  W     D +SD S YL WEF  D +  +F   EF          +
Sbjct: 243 VLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHGWDDNFYAE 302

The following BLAST results are available for this feature:

BLAST of CsaV3_4G008910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137189.1	3.1e-172	100.00	F-box protein FBW2 [Cucumis sativus] >XP_011653353.1 F-box protein FBW2 [Cucumis...	[more]
XP_008455631.1	3.0e-159	92.18	PREDICTED: F-box protein FBW2-like [Cucumis melo] >XP_008455634.1 PREDICTED: F-b...	[more]
KAA0045315.1	7.5e-158	91.21	F-box protein FBW2-like [Cucumis melo var. makuwa]	[more]
XP_038906234.1	1.6e-152	87.62	F-box protein FBW2-like [Benincasa hispida] >XP_038906235.1 F-box protein FBW2-l...	[more]
XP_023553120.1	4.7e-136	79.14	F-box protein FBW2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_4G008910.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPE4	7.7e-73	49.68	F-box protein FBW2 OS=Arabidopsis thaliana OX=3702 GN=FBW2 PE=1 SV=1	[more]
Q9M0U9	4.4e-20	29.87	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9FDX1	5.8e-20	28.52	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9S9V9	2.1e-17	28.51	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9S9V8	6.6e-16	30.80	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]

BLAST of CsaV3_4G008910.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0J6	1.5e-172	100.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G096100 PE=4 ...	[more]
A0A1S4E0L3	1.5e-159	92.18	F-box protein FBW2-like OS=Cucumis melo OX=3656 GN=LOC103495755 PE=4 SV=1	[more]
A0A5D3CAA0	1.5e-159	92.18	F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TVA4	3.6e-158	91.21	F-box protein FBW2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1EMK2	2.3e-136	79.14	F-box protein FBW2-like OS=Cucurbita moschata OX=3662 GN=LOC111435957 PE=4 SV=1	[more]

BLAST of CsaV3_4G008910.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08980.1	5.5e-74	49.68	F-BOX WITH WD-40 2	[more]
AT4G08980.3	5.5e-74	49.68	F-BOX WITH WD-40 2	[more]
AT4G08980.2	5.5e-74	49.68	F-BOX WITH WD-40 2	[more]
AT4G08980.4	5.5e-74	49.68	F-BOX WITH WD-40 2	[more]
AT4G08980.5	5.5e-74	49.68	F-BOX WITH WD-40 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 2..246 e-value: 6.2E-27 score: 96.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 9..53 e-value: 1.4E-5 score: 24.8
None	No IPR available	PANTHER	PTHR16134:SF111	F-BOX PROTEIN FBW2	coord: 5..278
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 5..278
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 33..223

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G008910	CsaV3_4G008910	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G008910.1.exon3	CsaV3_4G008910.1.exon3	exon
CsaV3_4G008910.1.exon2	CsaV3_4G008910.1.exon2	exon
CsaV3_4G008910.1.exon1	CsaV3_4G008910.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G008910.1.cds3	CsaV3_4G008910.1.cds3	CDS
CsaV3_4G008910.1.cds2	CsaV3_4G008910.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G008910.1	CsaV3_4G008910.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding