CsaV3_4G006440.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G006440.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	high mobility group B protein 6
Location	chr4: 4306307 .. 4309079 (+)
Sequence length	1503
RNA-Seq Expression	CsaV3_4G006440.1
Synteny	CsaV3_4G006440.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACAAACAAATCCGACCGTTCATCTTCTTTCCCTCCTTTATAAAACCCTCTCTCTTCCCTTCATTTCTTTTCACATCACAACTTCAGAGTTCAAACCTCTCTTTCTTCTTTCTTTCATTTCTCATTTTCTCTCCAATGGCCGATTCCACCACTCTTCAACCTCCCGTTACCGGTGCACCTGCCGGACCCACAAAGAAACCAAGAAACAGCCGGAAGGCTTTGAAGGACAAAAACTCTTCACCGGAGGTACCACAATCTCAATCCATGGTTCCGAAAGTTACAGCACCATCGGAAGGAGAGATCCTCTCTCAGAATCAAACTTCTGCTAAGAAACCGAAATCCAAAGCCGCAGCAAAGAAGCAGCCGGCGAACCAATCCTTTGATAAAGATTTGCAGGAAATGCAGGATATGCTTCAGCAGTTGAAGCTCGATAAGGAGAAGACTGAGGAGCTGTTGAAAGAGAAAGATGAGATGCTTAAACAGAAGGATGAAGAGCTTAAAACGAGGGATAAAGAACAGGAAAAACTCCAGATCGAATTGAAGAAATTGCAGAAGTTAAAGGAGTTCAAACCTACTATGGTTCGTTTCTTAATCTCGTGTCTTTTTCTTTATGGTTTTCACTACTTACTGAGTAGAAAGGAACATGAATTGTTGCAATTCTGTTTGATATAGATGGAAGATCTGTTTAGGGTTTTTCATTTCAGATTGATGAAATTCTTTTCATTCTTAATCAGAACTTTCCTATGATTCAAATTTTCAAAGACAAAGAACAAGATAAGAAAGAGAAAAAGAAATGCGCGGAAAAGAAGAGGCCGGCACCCCCTTACATCTTATGGTGCAAAGATCAGTGGAACGAGGTAGATTAAAAAACTGCTGATAGTTCTTGATTACGATGAAGATTAATATTAAATTGTTAAATAACAACTTCTGAAATTCACATTTGTGGCTTTGTGTCCTCCGATGCAGATCAAGAAGGAGAATCCAGAGGCAGATTTCAAGGAAACCTCAAACATTTTGGGGGCTAAATGGAAGACTATTTCAGCAGAGGAGAAGAAGCCATATGAGGAGAAGTACCAAGCTGAAAAAGAAACCTATTTGCGAATCACTTCTAAAGAGAAGCGTGAGAGTGAGGCCATGAAGTTGTTAGAAGAAGAGCAGAAGCAGAAGACGGCTATGGAGCTGCTTGAGCAATACCTTCAATTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAAAAGAAGTAAGAACCATATTTGCTCTGTGTTAGCTTAAAAACACTTGGGAAATTTTCTAGTGCATTACTAATGTTCGATAAAATGCCCTTTAGGAAAGAGAAAGATCCATTGAAGCCAAAACAGCCCATGTCTGCATTCTTTCTCTTCTCAAATGAGAGGCGTGCATCTCTTGTTGCTGAAAACAAGAATGTTGTTGAGGTTGTTAGATTAACAGCTTTTCGAATTGGGATTTCTCTGTGTTTGTCAATGGTAGAATTAATTTGCTTTTGTAGTCTAATTTTGTCCACTGTTTTCCTCATTCAGCTAGCAAAGATAGCAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAAAGGTCCTTACGAAGAGGTGAGGATTCATTGAAGAAAACACTCCAAAAATGAAATATTATTCACCAAATTTTCATTCAAGATCAATATTCAATACTAACTCTTGAACGTATGCAGATGGCAAAGAAGAACAAGGAAAAATACATGCAGGAAATGGAAATTTACGAGCAGAAAAAGGAGGAGGAAGCAGCAATTCTGAAGAAAGAAGAGGAAGAGCAAATGAAGGTTCAGAAACATGAGGCTTTACTATTGCTAAAAAAGAAAGAAAAAACCGAGACTATTATAAAGAAATCGAAGGAGGAGCGCCAGAAGAAGAAGAAGGAAGGGAAAAATCCTGTCGATCCTAACAAGCCTAAGAAGCCTGCATCCTCCTACATCTTGTTCAGGTTCAACAATAACAAAACACCCCTTCATTAACCAGAAGAAATGGAATTGGAGAATTTCATTTACTTAACTTGATTATTGTGTTATTTACAGTAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAAGCCTGGAGTTAGCAACTCTACAGTGAATGCACTGATATCAGTGAAATGGAAGGTTTGATGGACTTTTGATTCAAATATTTCTTCTGAGAAAAATTTCATTTCTGGGTTATGTTTCTGATAAATGATTGGTTCCGTTCTTGTGATTTGGTTTTGGGGTTAATAGGAACTAAGTGAAGAGGAGAGAAAAATATGGAATGACAAAGCTGCAGAAGCCATGGAAGGTTACAAGAAGGAAGTTGAGGAGTACAACAAAAGTGTTGCTGAAATGAAAGGTGATGATGATGATCAAGAGAAGAGTTAGTAGATTAGTTTTTCTTCGCTGTTCAAGTGTTGTTTGAACAGTCCTTAACAATGACTGCTTTTGATTAGTCGCTGCTAATCTTGGTTCTCTTTTCCCGAATGTATCGCTTAAATTCTAATGAGAAACCTCTGATTCTATAACCCAGTGGTCAATATATATATATTTGGAATACACTCAGAGGGATTAAATTTACTTCAAAACTTATCTCAATTAGCCTAATTTAATTCTTTTTTAAGCGAAGTGTTCGATCTTAGGACTGTTGGAGCATATTTTTACCATTTACACATTAACTTTACGAATAAAAAGAAAAGCACTAAATCATTATTTATTTCTCCTTTTTGGGATAAATTTGTTCGTTTATGTAAATGATTATTTC

mRNA sequence

ATGGCCGATTCCACCACTCTTCAACCTCCCGTTACCGGTGCACCTGCCGGACCCACAAAGAAACCAAGAAACAGCCGGAAGGCTTTGAAGGACAAAAACTCTTCACCGGAGGTACCACAATCTCAATCCATGGTTCCGAAAGTTACAGCACCATCGGAAGGAGAGATCCTCTCTCAGAATCAAACTTCTGCTAAGAAACCGAAATCCAAAGCCGCAGCAAAGAAGCAGCCGGCGAACCAATCCTTTGATAAAGATTTGCAGGAAATGCAGGATATGCTTCAGCAGTTGAAGCTCGATAAGGAGAAGACTGAGGAGCTGTTGAAAGAGAAAGATGAGATGCTTAAACAGAAGGATGAAGAGCTTAAAACGAGGGATAAAGAACAGGAAAAACTCCAGATCGAATTGAAGAAATTGCAGAAGTTAAAGGAGTTCAAACCTACTATGAACTTTCCTATGATTCAAATTTTCAAAGACAAAGAACAAGATAAGAAAGAGAAAAAGAAATGCGCGGAAAAGAAGAGGCCGGCACCCCCTTACATCTTATGGTGCAAAGATCAGTGGAACGAGATCAAGAAGGAGAATCCAGAGGCAGATTTCAAGGAAACCTCAAACATTTTGGGGGCTAAATGGAAGACTATTTCAGCAGAGGAGAAGAAGCCATATGAGGAGAAGTACCAAGCTGAAAAAGAAACCTATTTGCGAATCACTTCTAAAGAGAAGCGTGAGAGTGAGGCCATGAAGTTGTTAGAAGAAGAGCAGAAGCAGAAGACGGCTATGGAGCTGCTTGAGCAATACCTTCAATTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAAAAGAAGAAAGAGAAAGATCCATTGAAGCCAAAACAGCCCATGTCTGCATTCTTTCTCTTCTCAAATGAGAGGCGTGCATCTCTTGTTGCTGAAAACAAGAATGTTGTTGAGCTAGCAAAGATAGCAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAAAGGTCCTTACGAAGAGATGGCAAAGAAGAACAAGGAAAAATACATGCAGGAAATGGAAATTTACGAGCAGAAAAAGGAGGAGGAAGCAGCAATTCTGAAGAAAGAAGAGGAAGAGCAAATGAAGGTTCAGAAACATGAGGCTTTACTATTGCTAAAAAAGAAAGAAAAAACCGAGACTATTATAAAGAAATCGAAGGAGGAGCGCCAGAAGAAGAAGAAGGAAGGGAAAAATCCTGTCGATCCTAACAAGCCTAAGAAGCCTGCATCCTCCTACATCTTGTTCAGTAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAAGCCTGGAGTTAGCAACTCTACAGTGAATGCACTGATATCAGTGAAATGGAAGGAACTAAGTGAAGAGGAGAGAAAAATATGGAATGACAAAGCTGCAGAAGCCATGGAAGGTTACAAGAAGGAAGTTGAGGAGTACAACAAAAGTGTTGCTGAAATGAAAGGTGATGATGATGATCAAGAGAAGAGTTAG

Coding sequence (CDS)

ATGGCCGATTCCACCACTCTTCAACCTCCCGTTACCGGTGCACCTGCCGGACCCACAAAGAAACCAAGAAACAGCCGGAAGGCTTTGAAGGACAAAAACTCTTCACCGGAGGTACCACAATCTCAATCCATGGTTCCGAAAGTTACAGCACCATCGGAAGGAGAGATCCTCTCTCAGAATCAAACTTCTGCTAAGAAACCGAAATCCAAAGCCGCAGCAAAGAAGCAGCCGGCGAACCAATCCTTTGATAAAGATTTGCAGGAAATGCAGGATATGCTTCAGCAGTTGAAGCTCGATAAGGAGAAGACTGAGGAGCTGTTGAAAGAGAAAGATGAGATGCTTAAACAGAAGGATGAAGAGCTTAAAACGAGGGATAAAGAACAGGAAAAACTCCAGATCGAATTGAAGAAATTGCAGAAGTTAAAGGAGTTCAAACCTACTATGAACTTTCCTATGATTCAAATTTTCAAAGACAAAGAACAAGATAAGAAAGAGAAAAAGAAATGCGCGGAAAAGAAGAGGCCGGCACCCCCTTACATCTTATGGTGCAAAGATCAGTGGAACGAGATCAAGAAGGAGAATCCAGAGGCAGATTTCAAGGAAACCTCAAACATTTTGGGGGCTAAATGGAAGACTATTTCAGCAGAGGAGAAGAAGCCATATGAGGAGAAGTACCAAGCTGAAAAAGAAACCTATTTGCGAATCACTTCTAAAGAGAAGCGTGAGAGTGAGGCCATGAAGTTGTTAGAAGAAGAGCAGAAGCAGAAGACGGCTATGGAGCTGCTTGAGCAATACCTTCAATTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAAAAGAAGAAAGAGAAAGATCCATTGAAGCCAAAACAGCCCATGTCTGCATTCTTTCTCTTCTCAAATGAGAGGCGTGCATCTCTTGTTGCTGAAAACAAGAATGTTGTTGAGCTAGCAAAGATAGCAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAAAGGTCCTTACGAAGAGATGGCAAAGAAGAACAAGGAAAAATACATGCAGGAAATGGAAATTTACGAGCAGAAAAAGGAGGAGGAAGCAGCAATTCTGAAGAAAGAAGAGGAAGAGCAAATGAAGGTTCAGAAACATGAGGCTTTACTATTGCTAAAAAAGAAAGAAAAAACCGAGACTATTATAAAGAAATCGAAGGAGGAGCGCCAGAAGAAGAAGAAGGAAGGGAAAAATCCTGTCGATCCTAACAAGCCTAAGAAGCCTGCATCCTCCTACATCTTGTTCAGTAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAAGCCTGGAGTTAGCAACTCTACAGTGAATGCACTGATATCAGTGAAATGGAAGGAACTAAGTGAAGAGGAGAGAAAAATATGGAATGACAAAGCTGCAGAAGCCATGGAAGGTTACAAGAAGGAAGTTGAGGAGTACAACAAAAGTGTTGCTGAAATGAAAGGTGATGATGATGATCAAGAGAAGAGTTAG

Protein sequence

MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYILWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKSVAEMKGDDDDQEKS*

Homology

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BLAST of CsaV3_4G006440.1 vs. NCBI nr
Match: XP_004149754.1 (high mobility group B protein 6 [Cucumis sativus] >KGN53391.1 hypothetical protein Csa_014761 [Cucumis sativus])

HSP 1 Score: 892.9 bits (2306), Expect = 1.3e-255
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN
Sbjct: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE
Sbjct: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQEKS 501
           EEYNKSVAEMKGDDDDQEKS
Sbjct: 481 EEYNKSVAEMKGDDDDQEKS 500

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BLAST of CsaV3_4G006440.1 vs. NCBI nr
Match: XP_008451961.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo])

HSP 1 Score: 850.5 bits (2196), Expect = 7.3e-243
Identity = 478/498 (95.98%), Postives = 488/498 (97.99%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTT++ PV+GAPA PTKKPRNSRKALKDKNSSPEVPQSQSMV KVT PSEGEILSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           Q+SAKKPKSKAAAKKQPA QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQI KDKEQDKKEKKKCAEKKRPA PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTI AEEKKPYEEKYQAEKETYLRITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKN+VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQE 499
           EEYNKSVAEMKGDD +++
Sbjct: 481 EEYNKSVAEMKGDDHEEK 498

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BLAST of CsaV3_4G006440.1 vs. NCBI nr
Match: KAA0044887.1 (high mobility group B protein 6 [Cucumis melo var. makuwa] >TYK16584.1 high mobility group B protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 813.9 bits (2101), Expect = 7.6e-232
Identity = 462/498 (92.77%), Postives = 472/498 (94.78%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTT++ PV+GAPA PTKKPRNSRKALKDKNSSPEVPQSQSMV KVT PSEGEILSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           Q+SAKKPKSKAAAKKQPA QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQI KDKEQDKKEKKKCAEKKRPA PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTI AEEKKPYEEKYQAEKETYLRITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQ                KEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQ----------------KEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKN+VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQE 499
           EEYNKSVAEMKGDD +++
Sbjct: 481 EEYNKSVAEMKGDDHEEK 482

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BLAST of CsaV3_4G006440.1 vs. NCBI nr
Match: XP_038882160.1 (high mobility group B protein 6-like [Benincasa hispida])

HSP 1 Score: 789.6 bits (2038), Expect = 1.5e-224
Identity = 444/494 (89.88%), Postives = 469/494 (94.94%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADS T + P+TGAPAGPTKKPRNSRK LKDKNSS +V QS+SMV KVT  SEGEILSQN
Sbjct: 1   MADSATAELPITGAPAGPTKKPRNSRKPLKDKNSSKKVTQSESMVTKVTQQSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           ++SAKKPKSKAAAKKQPA QSFDKDL EMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  KSSAKKPKSKAAAKKQPAKQSFDKDLHEMQDMLQQLRLDKEKTEELLKAKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKT+DKEQEKLQIELKKLQKLKEFKPTMNFPMIQI KDKEQDKKEKKK AEKKRPAPPYI
Sbjct: 121 LKTKDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKYAEKKRPAPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEA+FKE SNILGAKWK++SAEEKKPYEE+YQAEKE+YL ITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVSAEEKKPYEERYQAEKESYLLITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFKEE EKENKKKKK+KDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEETEKENKKKKKQKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASL+ ENKNV+E+AKIAGEEWKNMTEEQ+GPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLLDENKNVLEVAKIAGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEALLLLKKKEKTETI+KK+KEE QKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIMKKTKEELQKKKKEGKKAVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSV EE+PGV+N TVNA+ISVKWKELSE ERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVTEERPGVNNFTVNAMISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAEMKGDD 495
           EEYNKSVAEMKGDD
Sbjct: 481 EEYNKSVAEMKGDD 494

[Close]

BLAST of CsaV3_4G006440.1 vs. NCBI nr
Match: XP_022136932.1 (high mobility group B protein 13 [Momordica charantia])

HSP 1 Score: 749.6 bits (1934), Expect = 1.8e-212
Identity = 426/499 (85.37%), Postives = 460/499 (92.18%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADS T + P+ G PAG TKKPRNSRKALKDKNSSPE PQSQSMV KVT  S  E LSQN
Sbjct: 1   MADSATAEIPINGEPAGRTKKPRNSRKALKDKNSSPEEPQSQSMVTKVTQSSVEESLSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
            +S KK KSKAA KKQ A  SFDK+LQEMQDMLQQL+LDKEKTEELLK KDE+LKQKDEE
Sbjct: 61  LSSPKKSKSKAAPKKQQAKPSFDKELQEMQDMLQQLRLDKEKTEELLKAKDEILKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKL IELKKLQKLKEFKPTMNFPM+QI+KDKEQ+KKEKKKC EKKRP+PPYI
Sbjct: 121 LKTRDKEQEKLHIELKKLQKLKEFKPTMNFPMVQIYKDKEQEKKEKKKCPEKKRPSPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEA+FKE SNILGAKWKTI+A+EKKPYE +YQAEKE +L+ITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKTITADEKKPYEGRYQAEKEAFLQITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFK EAEKEN KKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKGEAEKEN-KKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRA+L+AENKN++E+AK+AGEEWKNMTEEQ+ PYEEMAKKN++KY QEMEIY+QKKEEE
Sbjct: 301 ERRATLLAENKNILEVAKLAGEEWKNMTEEQRVPYEEMAKKNRDKYTQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEAL+LLKKKEK ETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKLQKHEALMLLKKKEKNETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARK+VMEE+PGV+NSTVNALISVKWKELSE ERKIWND+AAEAMEGYKKEV
Sbjct: 421 SSYILFSKEARKTVMEERPGVNNSTVNALISVKWKELSEGERKIWNDRAAEAMEGYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQEK 500
           EEYNK+VAEMK   D  EK
Sbjct: 481 EEYNKTVAEMKNAADADEK 498

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot
Match: Q9SUP7 (High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 6.0e-139
Identity = 297/482 (61.62%), Postives = 373/482 (77.39%), Query Frame = 0


Query: 12  TGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKA 71
           T A   PTKKPRNSRKALK KN   E P S   V                      K K+
Sbjct: 3   TNADPAPTKKPRNSRKALKQKNELVETPPSPVSV----------------------KGKS 62

Query: 72  AAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKL 131
           A       +SF++DL EMQ ML+++K++K+KTEELLKEKDE+L++K+EEL+TRD EQEKL
Sbjct: 63  A-------KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKL 122

Query: 132 QIELKKLQKLKEFKPTMNFPMIQI----FKDKEQDKKEKKKCAEKKRPAPPYILWCKDQW 191
           ++ELKKLQK+KEFKP M F   Q      + ++ +KK+KK C E KRP+  Y+LWCKDQW
Sbjct: 123 KVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQW 182

Query: 192 NEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMK 251
            E+KKENPEADFKETSNILGAKWK++SAE+KKPYEE+YQ EKE YL++ +KEKRE EAMK
Sbjct: 183 TEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMK 242

Query: 252 LLEEEQKQKTAMELLEQYLQFKEEAEKENKKK-KKEKDPLKPKQPMSAFFLFSNERRASL 311
           LLE++QKQ+TAMELL+QYL F +EAE++NKKK KKEKDPLKPK P+SAF +++NERRA+L
Sbjct: 243 LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAAL 302

Query: 312 VAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKK 371
             ENK+VVE+AKI GEEWKN+++++K PYE++AKKNKE Y+Q ME Y++ KEEEA   KK
Sbjct: 303 REENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKK 362

Query: 372 EEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILF 431
           EEEE +K+ K EAL +LKKKEKT+ +IKK   E+  KKK+ +N VDPNKPKKPASSY LF
Sbjct: 363 EEEELLKLHKQEALQMLKKKEKTDNLIKK---EKATKKKKNEN-VDPNKPKKPASSYFLF 422

Query: 432 SKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKS 489
           SK+ RK + EE+PG +N+TV ALIS+KWKELSEEE++++N KAA+ ME YKKEVE YNK 
Sbjct: 423 SKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKK 451

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot
Match: Q9T012 (High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.8e-136
Identity = 297/471 (63.06%), Postives = 360/471 (76.43%), Query Frame = 0


Query: 20  KKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKAAAKKQPAN 79
           KK RNSRKALK KN                     EI+  +  S K  ++K         
Sbjct: 12  KKSRNSRKALKQKN---------------------EIVESSPVSDKGKETK--------- 71

Query: 80  QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQ 139
            SF+KDL EMQ ML+++K++KEKTE+LLKEKDE+L++K       + EQEKL+ ELKKLQ
Sbjct: 72  -SFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKK-------EVEQEKLKTELKKLQ 131

Query: 140 KLKEFKPTMNFPMIQIFKDKEQDKKEKKK---CAEKKRPAPPYILWCKDQWNEIKKENPE 199
           K+KEFKP M F   Q     E++KK KKK   CAE KRP+ PYILWCKD WNE+KK+NPE
Sbjct: 132 KMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPE 191

Query: 200 ADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMKLLEEEQKQK 259
           ADFKETSNILGAKWK ISAEEKKPYEEKYQA+KE YL++ +KEKRE EAMKLL++EQKQK
Sbjct: 192 ADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMKLLDDEQKQK 251

Query: 260 TAMELLEQYLQFKEEAEKENKKK-KKEKDPLKPKQPMSAFFLFSNERRASLVAENKNVVE 319
           TAMELL+QYL F +EAE +NKKK KK KDPLKPKQP+SA+ +++NERRA+L  ENK+V+E
Sbjct: 252 TAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKGENKSVIE 311

Query: 320 LAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQ 379
           +AK+AGEEWKN++EE+K PY++MAKKNKE Y+QEME Y++ KEEEA   KKEEEE MK+ 
Sbjct: 312 VAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLH 371

Query: 380 KHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILFSKEARKSVM 439
           K EAL LLKKKEKT+ IIKK+KE  + KKK     VDPNKPKKP SSY LF K+ARKSV+
Sbjct: 372 KQEALQLLKKKEKTDNIIKKTKETAKNKKK--NENVDPNKPKKPTSSYFLFCKDARKSVL 431

Query: 440 EEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKS 487
           EE PG++NSTV A IS+KW EL EEE++++N KAAE ME YKKEVEEYNK+
Sbjct: 432 EEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNKT 442

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot
Match: P40618 (High mobility group protein B3 OS=Gallus gallus OX=9031 GN=HMGB3 PE=2 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-10
Identity = 63/232 (27.16%), Postives = 94/232 (40.52%), Query Frame = 0


Query: 284 DPLKPKQPMSAFFLFSNERRASLVAENK----NVVELAKIAGEEWKNMTEEQKGPYEEMA 343
           DP KPK  MSA+  F    R     +N     N  E +K   E WK M+ ++K  ++EMA
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMA 64

Query: 344 KKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEE 403
           K +K +Y +EM+ Y                                              
Sbjct: 65  KADKVRYDREMKDY---------------------------------------------- 124

Query: 404 RQKKKKEGKNPVDPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSE 463
                K GK   DPN PK+P S + LF  E R  +    PG+S   V   +   W  LS+
Sbjct: 125 --GPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSD 184

Query: 464 EERKIWNDKAAEAMEGYKKEVEEYNK------------SVAEMKGDDDDQEK 500
            E++ +N+KAA+  E Y+K+V +Y                A  K +++D+E+
Sbjct: 185 GEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEE 188

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot
Match: P40673 (High mobility group protein B2 OS=Bos taurus OX=9913 GN=HMGB2 PE=1 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-09
Identity = 57/187 (30.48%), Postives = 92/187 (49.20%), Query Frame = 0


Query: 179 YILWCKDQWNEIKKENPEA--DFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRIT 238
           ++  C++   E KK++P++  +F E S     +WKT+SA+EK  +E+  +++K  Y R  
Sbjct: 19  FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDR-- 78

Query: 239 SKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFF 298
                                         + K     +  KK K+KDP  PK+P SAFF
Sbjct: 79  ------------------------------EMKNYVPPKGDKKGKKKDPNAPKRPPSAFF 138

Query: 299 LFSNERRASLVAENK--NVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYE 358
           LF +E R  + +E+   ++ + AK  GE W   + + K PYE+ A K KEKY +++  Y 
Sbjct: 139 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 170

Query: 359 QKKEEEA 362
            K + EA
Sbjct: 199 AKGKSEA 170

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot
Match: P26583 (High mobility group protein B2 OS=Homo sapiens OX=9606 GN=HMGB2 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-09
Identity = 57/187 (30.48%), Postives = 92/187 (49.20%), Query Frame = 0


Query: 179 YILWCKDQWNEIKKENPEA--DFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRIT 238
           ++  C++   E KK++P++  +F E S     +WKT+SA+EK  +E+  +++K  Y R  
Sbjct: 19  FVQTCRE---EHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDR-- 78

Query: 239 SKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFF 298
                                         + K     +  KK K+KDP  PK+P SAFF
Sbjct: 79  ------------------------------EMKNYVPPKGDKKGKKKDPNAPKRPPSAFF 138

Query: 299 LFSNERRASLVAENK--NVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYE 358
           LF +E R  + +E+   ++ + AK  GE W   + + K PYE+ A K KEKY +++  Y 
Sbjct: 139 LFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 170

Query: 359 QKKEEEA 362
            K + EA
Sbjct: 199 AKGKSEA 170

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL
Match: A0A0A0KZT4 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 6.2e-256
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN
Sbjct: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE
Sbjct: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQEKS 501
           EEYNKSVAEMKGDDDDQEKS
Sbjct: 481 EEYNKSVAEMKGDDDDQEKS 500

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL
Match: A0A1S3BS50 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 3.5e-243
Identity = 478/498 (95.98%), Postives = 488/498 (97.99%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTT++ PV+GAPA PTKKPRNSRKALKDKNSSPEVPQSQSMV KVT PSEGEILSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           Q+SAKKPKSKAAAKKQPA QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQI KDKEQDKKEKKKCAEKKRPA PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTI AEEKKPYEEKYQAEKETYLRITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKN+VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQE 499
           EEYNKSVAEMKGDD +++
Sbjct: 481 EEYNKSVAEMKGDDHEEK 498

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL
Match: A0A5D3D035 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004060 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.7e-232
Identity = 462/498 (92.77%), Postives = 472/498 (94.78%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADSTT++ PV+GAPA PTKKPRNSRKALKDKNSSPEVPQSQSMV KVT PSEGEILSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           Q+SAKKPKSKAAAKKQPA QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQI KDKEQDKKEKKKCAEKKRPA PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEADFKETSNILGAKWKTI AEEKKPYEEKYQAEKETYLRITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQ                KEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQ----------------KEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRASLVAENKN+VELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQE 499
           EEYNKSVAEMKGDD +++
Sbjct: 481 EEYNKSVAEMKGDDHEEK 482

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL
Match: A0A6J1C6T7 (high mobility group B protein 13 OS=Momordica charantia OX=3673 GN=LOC111008505 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 8.5e-213
Identity = 426/499 (85.37%), Postives = 460/499 (92.18%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MADS T + P+ G PAG TKKPRNSRKALKDKNSSPE PQSQSMV KVT  S  E LSQN
Sbjct: 1   MADSATAEIPINGEPAGRTKKPRNSRKALKDKNSSPEEPQSQSMVTKVTQSSVEESLSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
            +S KK KSKAA KKQ A  SFDK+LQEMQDMLQQL+LDKEKTEELLK KDE+LKQKDEE
Sbjct: 61  LSSPKKSKSKAAPKKQQAKPSFDKELQEMQDMLQQLRLDKEKTEELLKAKDEILKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKL IELKKLQKLKEFKPTMNFPM+QI+KDKEQ+KKEKKKC EKKRP+PPYI
Sbjct: 121 LKTRDKEQEKLHIELKKLQKLKEFKPTMNFPMVQIYKDKEQEKKEKKKCPEKKRPSPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEA+FKE SNILGAKWKTI+A+EKKPYE +YQAEKE +L+ITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKTITADEKKPYEGRYQAEKEAFLQITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RESEAMKLLEEEQKQKTAMELLEQYLQFK EAEKEN KKKKEKDPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKGEAEKEN-KKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERRA+L+AENKN++E+AK+AGEEWKNMTEEQ+ PYEEMAKKN++KY QEMEIY+QKKEEE
Sbjct: 301 ERRATLLAENKNILEVAKLAGEEWKNMTEEQRVPYEEMAKKNRDKYTQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEAL+LLKKKEK ETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKLQKHEALMLLKKKEKNETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARK+VMEE+PGV+NSTVNALISVKWKELSE ERKIWND+AAEAMEGYKKEV
Sbjct: 421 SSYILFSKEARKTVMEERPGVNNSTVNALISVKWKELSEGERKIWNDRAAEAMEGYKKEV 480

Query: 481 EEYNKSVAEMKGDDDDQEK 500
           EEYNK+VAEMK   D  EK
Sbjct: 481 EEYNKTVAEMKNAADADEK 498

[Close]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL
Match: A0A6J1FQ69 (high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111447782 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.9e-212
Identity = 429/498 (86.14%), Postives = 458/498 (91.97%), Query Frame = 0


Query: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60
           MA S T +  VTG P G TKKPRNSRKALKDKNSSPE  +SQSMV KVT PSE E LSQN
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEENLSQN 60

Query: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120
           Q     PK KAA KKQPA QSFDKDLQEMQDMLQQL+LDKEKTEELLKEKDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180
           LKTRDKEQEKLQIELKKLQKLKEFKP MNFPMIQI KDKEQ+KKEKKKC+EKKRP+PPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240
           LWCKDQWNEIKKENPEA+FKE SNILGAKWK+++AEEKKPYEE+YQAEKE YL+ITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300
           RE+EAMKLLEEEQKQKTAMELL+QYLQFKEEAEK+NKKKKKE+DPLKPKQPMSAFFLFSN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360
           ERR SL AENKNV+E+AKI G EWKNMTEEQ+GPYEEMAKK KEKYMQEME Y+QKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGGEWKNMTEEQRGPYEEMAKKKKEKYMQEMETYKQKKEEE 360

Query: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420
           AA LKKEEEEQMK+QKHEALLLLKKKEKTETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480
           SSYILFSKEARK VMEEKPGV+NSTVNALISVKWKELSE ERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKVVMEEKPGVNNSTVNALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKSVAE-MKGDDDDQ 498
           EEYNK+VAE  KG+++++
Sbjct: 481 EEYNKTVAETTKGEEEEK 491

[Close]

BLAST of CsaV3_4G006440.1 vs. TAIR 10
Match: AT4G23800.1 (HMG (high mobility group) box protein )

HSP 1 Score: 495.7 bits (1275), Expect = 4.3e-140
Identity = 297/482 (61.62%), Postives = 373/482 (77.39%), Query Frame = 0


Query: 12  TGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKA 71
           T A   PTKKPRNSRKALK KN   E P S   V                      K K+
Sbjct: 3   TNADPAPTKKPRNSRKALKQKNELVETPPSPVSV----------------------KGKS 62

Query: 72  AAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKL 131
           A       +SF++DL EMQ ML+++K++K+KTEELLKEKDE+L++K+EEL+TRD EQEKL
Sbjct: 63  A-------KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKL 122

Query: 132 QIELKKLQKLKEFKPTMNFPMIQI----FKDKEQDKKEKKKCAEKKRPAPPYILWCKDQW 191
           ++ELKKLQK+KEFKP M F   Q      + ++ +KK+KK C E KRP+  Y+LWCKDQW
Sbjct: 123 KVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQW 182

Query: 192 NEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMK 251
            E+KKENPEADFKETSNILGAKWK++SAE+KKPYEE+YQ EKE YL++ +KEKRE EAMK
Sbjct: 183 TEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMK 242

Query: 252 LLEEEQKQKTAMELLEQYLQFKEEAEKENKKK-KKEKDPLKPKQPMSAFFLFSNERRASL 311
           LLE++QKQ+TAMELL+QYL F +EAE++NKKK KKEKDPLKPK P+SAF +++NERRA+L
Sbjct: 243 LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAAL 302

Query: 312 VAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKK 371
             ENK+VVE+AKI GEEWKN+++++K PYE++AKKNKE Y+Q ME Y++ KEEEA   KK
Sbjct: 303 REENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKK 362

Query: 372 EEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILF 431
           EEEE +K+ K EAL +LKKKEKT+ +IKK   E+  KKK+ +N VDPNKPKKPASSY LF
Sbjct: 363 EEEELLKLHKQEALQMLKKKEKTDNLIKK---EKATKKKKNEN-VDPNKPKKPASSYFLF 422

Query: 432 SKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKS 489
           SK+ RK + EE+PG +N+TV ALIS+KWKELSEEE++++N KAA+ ME YKKEVE YNK 
Sbjct: 423 SKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKK 451

[Close]

BLAST of CsaV3_4G006440.1 vs. TAIR 10
Match: AT4G23800.2 (HMG (high mobility group) box protein )

HSP 1 Score: 493.8 bits (1270), Expect = 1.6e-139
Identity = 294/482 (61.00%), Postives = 367/482 (76.14%), Query Frame = 0


Query: 12  TGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKA 71
           T A   PTKKPRNSRKALK KN   E P S   V                      K K+
Sbjct: 3   TNADPAPTKKPRNSRKALKQKNELVETPPSPVSV----------------------KGKS 62

Query: 72  AAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKL 131
           A       +SF++DL EMQ ML+++K++K+KTEELLKEKDE+L++K+EEL+TRD EQEKL
Sbjct: 63  A-------KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKL 122

Query: 132 QIELKKLQKLKEFKPTMNFPMIQI----FKDKEQDKKEKKKCAEKKRPAPPYILWCKDQW 191
           ++ELKKLQK+KEFKP M F   Q      + ++ +KK+KK C E KRP+  Y+LWCKDQW
Sbjct: 123 KVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQW 182

Query: 192 NEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMK 251
            E+KKENPEADFKETSNILGAKWK++SAE+KKPYEE+YQ EKE YL++ +KEKRE EAMK
Sbjct: 183 TEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMK 242

Query: 252 LLEEEQKQKTAMELLEQYLQFKEEAEKENKKK-KKEKDPLKPKQPMSAFFLFSNERRASL 311
           LLE++QKQ+TAMELL+QYL F +EAE++NKKK KKEKDPLKPK P+SAF +++NERRA+L
Sbjct: 243 LLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAAL 302

Query: 312 VAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKK 371
             ENK+VVE+AKI GEEWKN+++++K PYE++AKKNKE Y+Q ME Y++ KEEEA   KK
Sbjct: 303 REENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKK 362

Query: 372 EEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILF 431
           EEEE +K+ K EAL +LKKKEKT+ +IKK K E           VDPNKPKKPASSY LF
Sbjct: 363 EEEELLKLHKQEALQMLKKKEKTDNLIKKKKNEN----------VDPNKPKKPASSYFLF 422

Query: 432 SKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKS 489
           SK+ RK + EE+PG +N+TV ALIS+KWKELSEEE++++N KAA+ ME YKKEVE YNK 
Sbjct: 423 SKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKK 445

[Close]

BLAST of CsaV3_4G006440.1 vs. TAIR 10
Match: AT4G11080.1 (HMG (high mobility group) box protein )

HSP 1 Score: 486.9 bits (1252), Expect = 2.0e-137
Identity = 297/471 (63.06%), Postives = 360/471 (76.43%), Query Frame = 0


Query: 20  KKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQNQTSAKKPKSKAAAKKQPAN 79
           KK RNSRKALK KN                     EI+  +  S K  ++K         
Sbjct: 12  KKSRNSRKALKQKN---------------------EIVESSPVSDKGKETK--------- 71

Query: 80  QSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKLQIELKKLQ 139
            SF+KDL EMQ ML+++K++KEKTE+LLKEKDE+L++K       + EQEKL+ ELKKLQ
Sbjct: 72  -SFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKK-------EVEQEKLKTELKKLQ 131

Query: 140 KLKEFKPTMNFPMIQIFKDKEQDKKEKKK---CAEKKRPAPPYILWCKDQWNEIKKENPE 199
           K+KEFKP M F   Q     E++KK KKK   CAE KRP+ PYILWCKD WNE+KK+NPE
Sbjct: 132 KMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPE 191

Query: 200 ADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMKLLEEEQKQK 259
           ADFKETSNILGAKWK ISAEEKKPYEEKYQA+KE YL++ +KEKRE EAMKLL++EQKQK
Sbjct: 192 ADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMKLLDDEQKQK 251

Query: 260 TAMELLEQYLQFKEEAEKENKKK-KKEKDPLKPKQPMSAFFLFSNERRASLVAENKNVVE 319
           TAMELL+QYL F +EAE +NKKK KK KDPLKPKQP+SA+ +++NERRA+L  ENK+V+E
Sbjct: 252 TAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAALKGENKSVIE 311

Query: 320 LAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEEAAILKKEEEEQMKVQ 379
           +AK+AGEEWKN++EE+K PY++MAKKNKE Y+QEME Y++ KEEEA   KKEEEE MK+ 
Sbjct: 312 VAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLH 371

Query: 380 KHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPASSYILFSKEARKSVM 439
           K EAL LLKKKEKT+ IIKK+KE  + KKK     VDPNKPKKP SSY LF K+ARKSV+
Sbjct: 372 KQEALQLLKKKEKTDNIIKKTKETAKNKKK--NENVDPNKPKKPTSSYFLFCKDARKSVL 431

Query: 440 EEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEVEEYNKS 487
           EE PG++NSTV A IS+KW EL EEE++++N KAAE ME YKKEVEEYNK+
Sbjct: 432 EEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNKT 442

[Close]

BLAST of CsaV3_4G006440.1 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 238 KEKRESEAMKLLEEEQ--KQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAF 297
           K K   EA+K +++ +  K+K   E        K    +  K+KK +KDP KPK+  SAF
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAF 68

Query: 298 FLFSNERRASLVAENKNVVELA---KIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEI 357
           F+F  + R +   EN NV  ++   K  G++WK+M++ +K PYEE A K K +Y ++M+ 
Sbjct: 69  FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 128

Query: 358 YEQKKEEEAAILKKEEEE 371
           Y +  EE +   +K   E
Sbjct: 129 YNKNLEEGSDESEKSRSE 138

[Close]

BLAST of CsaV3_4G006440.1 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 238 KEKRESEAMKLLEEEQ--KQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAF 297
           K K   EA+K +++ +  K+K   E        K    +  K+KK +KDP KPK+  SAF
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAF 68

Query: 298 FLFSNERRASLVAENKNVVELA---KIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEI 357
           F+F  + R +   EN NV  ++   K  G++WK+M++ +K PYEE A K K +Y ++M+ 
Sbjct: 69  FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 128

Query: 358 YEQKKEEEAAILKKEEEE 371
           Y +  EE +   +K   E
Sbjct: 129 YNKNLEEGSDESEKSRSE 138

The following BLAST results are available for this feature:

BLAST of CsaV3_4G006440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149754.1	1.3e-255	100.00	high mobility group B protein 6 [Cucumis sativus] >KGN53391.1 hypothetical prote...	[more]
XP_008451961.1	7.3e-243	95.98	PREDICTED: high mobility group B protein 6 [Cucumis melo]	[more]
KAA0044887.1	7.6e-232	92.77	high mobility group B protein 6 [Cucumis melo var. makuwa] >TYK16584.1 high mobi...	[more]
XP_038882160.1	1.5e-224	89.88	high mobility group B protein 6-like [Benincasa hispida]	[more]
XP_022136932.1	1.8e-212	85.37	high mobility group B protein 13 [Momordica charantia]	[more]

BLAST of CsaV3_4G006440.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUP7	6.0e-139	61.62	High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV...	[more]
Q9T012	2.8e-136	63.06	High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 ...	[more]
P40618	1.8e-10	27.16	High mobility group protein B3 OS=Gallus gallus OX=9031 GN=HMGB3 PE=2 SV=3	[more]
P40673	2.0e-09	30.48	High mobility group protein B2 OS=Bos taurus OX=9913 GN=HMGB2 PE=1 SV=3	[more]
P26583	2.0e-09	30.48	High mobility group protein B2 OS=Homo sapiens OX=9606 GN=HMGB2 PE=1 SV=2	[more]

BLAST of CsaV3_4G006440.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZT4	6.2e-256	100.00	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1	[more]
A0A1S3BS50	3.5e-243	95.98	high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=...	[more]
A0A5D3D035	3.7e-232	92.77	High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1C6T7	8.5e-213	85.37	high mobility group B protein 13 OS=Momordica charantia OX=3673 GN=LOC111008505 ...	[more]
A0A6J1FQ69	1.9e-212	86.14	high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]

BLAST of CsaV3_4G006440.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23800.1	4.3e-140	61.62	HMG (high mobility group) box protein	[more]
AT4G23800.2	1.6e-139	61.00	HMG (high mobility group) box protein	[more]
AT4G11080.1	2.0e-137	63.06	HMG (high mobility group) box protein	[more]
AT3G51880.1	2.1e-06	34.78	high mobility group B1	[more]
AT3G51880.3	2.1e-06	34.78	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 386..406
None	No IPR available	COILS	Coil	Coil	coord: 336..370
None	No IPR available	COILS	Coil	Coil	coord: 79..141
None	No IPR available	COILS	Coil	Coil	coord: 466..493
None	No IPR available	COILS	Coil	Coil	coord: 258..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..425
None	No IPR available	PANTHER	PTHR46912:SF1	HIGH MOBILITY GROUP B PROTEIN 13	coord: 17..491
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 291..351 e-value: 9.99937E-14 score: 63.8009
None	No IPR available	CDD	cd00084	HMG-box	coord: 416..481 e-value: 5.04096E-13 score: 61.8659
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 174..234 e-value: 6.1501E-13 score: 61.8749
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 287..355 e-value: 3.0E-24 score: 96.6 coord: 171..241 e-value: 1.1E-15 score: 68.1 coord: 415..485 e-value: 7.6E-20 score: 81.9
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 173..234 e-value: 1.4E-16 score: 60.7 coord: 288..353 e-value: 1.6E-18 score: 66.9 coord: 416..484 e-value: 4.8E-17 score: 62.1
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 288..354 score: 19.388302
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 172..240 score: 16.356768
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 416..484 score: 17.741734
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 395..497 e-value: 7.1E-24 score: 86.0 coord: 271..367 e-value: 2.1E-24 score: 87.7
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 174..233 e-value: 2.0E-18 score: 68.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 411..490
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 160..234
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 275..361
IPR044601	3xHMG-box protein HMGB6/HMGB13	PANTHER	PTHR46912	HIGH MOBILITY GROUP B PROTEIN 13	coord: 17..491

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G006440	CsaV3_4G006440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006440.1.exon1	CsaV3_4G006440.1.exon1	exon
CsaV3_4G006440.1.exon2	CsaV3_4G006440.1.exon2	exon
CsaV3_4G006440.1.exon3	CsaV3_4G006440.1.exon3	exon
CsaV3_4G006440.1.exon4	CsaV3_4G006440.1.exon4	exon
CsaV3_4G006440.1.exon5	CsaV3_4G006440.1.exon5	exon
CsaV3_4G006440.1.exon6	CsaV3_4G006440.1.exon6	exon
CsaV3_4G006440.1.exon7	CsaV3_4G006440.1.exon7	exon
CsaV3_4G006440.1.exon8	CsaV3_4G006440.1.exon8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006440.1.cds1	CsaV3_4G006440.1.cds1	CDS
CsaV3_4G006440.1.cds2	CsaV3_4G006440.1.cds2	CDS
CsaV3_4G006440.1.cds3	CsaV3_4G006440.1.cds3	CDS
CsaV3_4G006440.1.cds4	CsaV3_4G006440.1.cds4	CDS
CsaV3_4G006440.1.cds5	CsaV3_4G006440.1.cds5	CDS
CsaV3_4G006440.1.cds6	CsaV3_4G006440.1.cds6	CDS
CsaV3_4G006440.1.cds7	CsaV3_4G006440.1.cds7	CDS
CsaV3_4G006440.1.cds8	CsaV3_4G006440.1.cds8	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006440.1	CsaV3_4G006440.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding