CsaV3_4G005380.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G005380.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein RTE1-HOMOLOG
Location	chr4: 3567897 .. 3571088 (+)
Sequence length	693
RNA-Seq Expression	CsaV3_4G005380.1
Synteny	CsaV3_4G005380.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTAGAAGCTCAGCAATTGCTGCATTAAATGAAAAAATGCAGATTAAATAGGACAAAAATGAGATGAATCAAAACACTCCAATACACAGCCATAATTATAGTAATAAGAGGGGGAGAATAAAATTTTAGAGAGCCGAACAGATTCAAGATATTGATCAGCCTTTGAAGAATCAAAATTTTCGAGTAAATAAAAGCATTACCGCCAAACGCCCATTTGTGAGAAGTGGCATTGGAATGAAGAAATTTCGGATGAATTCGGGCATGCTCCAAATCTCCTGTATTGGTTTCATGATCAACCTCGGAATCAAATAAATGAATACAAACATTAAACGTAGAACAAAGTATAACCATCATCAGGAAGAGGGTTTCCAGTAAGGCCGAAATCTAAATTTCCGGCTTTCCAAAAACTGCGACAATCAATGGTTTTTTTATCCGACGATGATACAATCGGCGTAGAACTGCCTCGTTGCTCTTGGAGTCTCGTCACAGATTTCGTTTTTTTGTTTGACATTGTGTTAGCTGCAGTTTCCTCATCGTCGCTGCTTGTTAAAACCACCACATCAGGAGGCGTGCTTCCCGTCTTCCGCGGCATCAGAACTTCGCCGGAGTTTCCCCCGATCAGAAACTACTTAGAAATACGTTCTGAATTCTGAACTTCGTCTCAGTTCTTTTAAAAAAAGCGCAAAAGTCAAAAACGGCGTCGTTTCGGTTCTCTTGGATTTAACATATACCAAAATCAATTTTAACAACCCCCCGGTCTCAACTTTGGAAACCGATCAAATTGATCGGTGATCAGGGAAGTTGCTTCACACGATCTTTCTTGGATTCTTCACCAAAATTATTCTGATTGGTAACTTCAACTTTCTTTCACACTTCTCTTCAGAAATTTGTTTATTTGTACTTCAAATTCTTCGTGTAACTTGTTTGTTTTACCTGTTTGATTTGTGTTCTATGCACTTGGTATTTGACTATCCCTAAAGTTGAGGAGATTTGGGAACTTCATCTCGTTATTTGATTGTAGGTAGCCGAGGGGTTTCCTCTTAACCTATTTTCTCAATTATGTTTTCTGAATCGAGATGAGCATACGGGTCAATGGGTGCTTGCAATTCCAGCCTATGGCTGCTTCTCTAATAAATACTGGAAGTTACTACTCAACTTCATACAATGTCTTTCCCTCTTCTTTCTTCCTTCGCCCTTTGCATGAATTCGTTTGAAAGTTTGGTTGAACAGCCTAATTTCGTTCTTCAAGATGAAATTTTGGCCTCTGTTTAAACTTTTTCTAATACATTCTCGCTATCTGCGGTCATCCTCCCAAAACGGTTATAAGATTTGCTGAGATTATGAAATTGACGTAAGGAAATTGGGATCGTTTAAGGTTAGGTCAATTTTTTTGTTGAAGCTCTGTTAAATTAAGGGTATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTACAAGCTAATTTCCACAATTGAACTAAAGATCAATCCCTTACAATCATTTTTTACCCAACTGATTTCATCATATATTAGTGATATAATATTAGATCTGGCCTTATTTTTGGATCAATTCGTGATTTAACATAGTATACATAGTCCAAAAGGTTCTGTGTTCAAACCCTATTTTCTCTAATCTTGATTTTCACATGTTGGATCTCTTACATATTTCAAGCTCTACAAGTGAGTGAGGAGTGTTAGTAATATAATATTAAATTTGTTTGACCCATTAGCTCAAGATTTTTTGTTTAATTGGTGATTTAACAATGTACTCGACTTGCAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTAACACATTGGATTCTGGTAGTTAAGTGAAGGTCAATTGCTTTTCTTCGTTGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCATATGGCGTATTATATACCATGTAGGTAGGAGGCAAATCATTTGATGTAACTCACGACCGTGAATTCTGGCAGCTTGTTTAGGCCATTAATGAATAGAGTTCATGAAATGCTAACTAGATAAGTGATTATGATAAATCAAAATATCTAAATAAAATCGTTTGTACAATTTTAAATCAGAACTTTTATCTTGTCTGTTGAATGTACTATTTAGTTTTAAAGGCAAGTCTGAATGAAATTATCATTGCAAAAGTAAGCAGAGTATTGTTTGCTCCCTTTTGCCCCTTAGATAAATAACATTTTTTTCTGGTCATTAAACGAAATCACATTGTTACATCAGGATCTCCTCCTAGCATGAAGTCAAATAGATAAAAGCGTGTGCTCCCCTCTAAAATGGAAGGGGAGGTAGCTGCAGATTCAACTTAGTGCCCTAGAAGGAACAAATCACCCCCACACAAAACACAAATTACTTTTTTTTTCCCTAATGAACACTGTTGTATAAAAGCTGCTGAACCATTTGAAACCAATTTCCTTTTGCTGTACAGGTAACCAGGATGAAGACTGAACCCTACTGTTCTTGTTTGTTCTATTCCTTTCTTTTATCCTTCCTTTACTTGTTTACTCTTGCTAGTGC

mRNA sequence

ATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Coding sequence (CDS)

ATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL*

Homology

[Close]

BLAST of CsaV3_4G005380.1 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 4.7e-128
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD
Sbjct: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237

[Close]

BLAST of CsaV3_4G005380.1 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 4.7e-128
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CsaV3_4G005380.1 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 460.7 bits (1184), Expect = 7.5e-126
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CsaV3_4G005380.1 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 5.0e-122
Identity = 218/226 (96.46%), Postives = 221/226 (97.79%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MESS DPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCIS HRSEEELREVDH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR GGWNVVNLAALIFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVF+IGLA+G TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of CsaV3_4G005380.1 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 437.6 bits (1124), Expect = 6.8e-119
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-76
Identity = 140/235 (59.57%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEE----------ELREVDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.7e-59
Identity = 112/210 (53.33%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----SAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D      TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 146
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-31
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 146
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.3e-128
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-126
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.3e-119
Identity = 211/226 (93.36%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL
Match: A0A5D3CZH3 (Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005200 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.6e-118
Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 16  MIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC 75
           MIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC
Sbjct: 1   MIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC 60

Query: 76  VDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYN 135
           VDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDDALRRSTQEFQHR+YN
Sbjct: 61  VDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYN 120

Query: 136 LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL 195
           LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL
Sbjct: 121 LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL 180

Query: 196 ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 ALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 215

[Close]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M SS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD+ REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 184
           STQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPF VVFSIG+A+  TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

[Close]

BLAST of CsaV3_4G005380.1 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 140/235 (59.57%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEE----------ELREVDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of CsaV3_4G005380.1 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 140/235 (59.57%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEE----------ELREVDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of CsaV3_4G005380.1 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 140/235 (59.57%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEE----------ELREVDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of CsaV3_4G005380.1 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-60
Identity = 112/210 (53.33%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----SAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D      TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

The following BLAST results are available for this feature:

BLAST of CsaV3_4G005380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	4.7e-128	100.00	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	4.7e-128	100.00	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
XP_008452120.1	7.5e-126	98.26	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei...	[more]
XP_038884143.1	5.0e-122	96.46	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_022136620.1	6.8e-119	93.36	protein RTE1-HOMOLOG [Momordica charantia]	[more]

BLAST of CsaV3_4G005380.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	1.9e-76	59.57	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	3.7e-59	53.33	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9H0R3	2.5e-31	40.12	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]
Q8BVA2	5.6e-31	39.53	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]

BLAST of CsaV3_4G005380.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	2.3e-128	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A1S4DZL7	3.6e-126	98.26	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1C4G0	3.3e-119	93.36	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A5D3CZH3	1.6e-118	98.60	Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A6J1FW19	1.7e-115	90.71	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]

BLAST of CsaV3_4G005380.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	1.4e-77	59.57	RTE1-homolog	[more]
AT3G51040.2	1.4e-77	59.57	RTE1-homolog	[more]
AT3G51040.3	1.4e-77	59.57	RTE1-homolog	[more]
AT2G26070.1	2.6e-60	53.33	Protein of unknown function (DUF778)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 100..174 e-value: 3.1E-19 score: 70.1 coord: 43..94 e-value: 8.5E-21 score: 75.2
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 3..230
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 3..230

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G005380	CsaV3_4G005380	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G005380.1.exon1	CsaV3_4G005380.1.exon1	exon
CsaV3_4G005380.1.exon2	CsaV3_4G005380.1.exon2	exon
CsaV3_4G005380.1.exon3	CsaV3_4G005380.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G005380.1.cds2	CsaV3_4G005380.1.cds2	CDS
CsaV3_4G005380.1.cds3	CsaV3_4G005380.1.cds3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G005380.1	CsaV3_4G005380.1-protein	polypeptide