CsaV3_4G001110.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G001110.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	neuronal acetylcholine receptor subunit alpha-2-like
Location	chr4: 623383 .. 624033 (+)
Sequence length	492
RNA-Seq Expression	CsaV3_4G001110.1
Synteny	CsaV3_4G001110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACATCACATTCCTTCTTCAACAATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAACTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCCTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGATTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAATGGAACCATTGGGGAGTTAGCTGTACAAATCCAAATATTAGTTTCTTTTAGGACTTAATAATTGAGTTTAGAATGAGAAGTTATTTGAGGAGATTGGGTTGTAAAAATCGTTTGAATTTATGGATTAATGAAGAG

mRNA sequence

ATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAACTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCCTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGATTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA

Coding sequence (CDS)

ATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAACTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCCTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGATTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA

Protein sequence

MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE*

Homology

[Close]

BLAST of CsaV3_4G001110.1 vs. NCBI nr
Match: XP_011652950.1 (uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical protein Csa_014810 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60
           MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ
Sbjct: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60

Query: 61  FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE 120
           FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE
Sbjct: 61  FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE 120

Query: 121 EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
Sbjct: 121 EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 163

[Close]

BLAST of CsaV3_4G001110.1 vs. NCBI nr
Match: XP_008454304.1 (PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >KAA0044406.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa] >TYK29533.1 neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 7.3e-59
Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60
           MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQ
Sbjct: 1   MSISTKFFHVRKPWKIL---------RRTFPVDFRPLRRFIKRIVHTTPTPLPHHYAERQ 60

Query: 61  FSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEE 120
           FSFNDTPIFH     RR PSASA  +F IPRFSCINPKVEFERY+DCEWE    EEEEEE
Sbjct: 61  FSFNDTPIFH-----RRPPSASATTMFQIPRFSCINPKVEFERYDDCEWEEEEEEEEEEE 120

Query: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Sbjct: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDDDE 150

[Close]

BLAST of CsaV3_4G001110.1 vs. NCBI nr
Match: XP_038906165.1 (uncharacterized protein LOC120092045 [Benincasa hispida])

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-50
Identity = 125/179 (69.83%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 3   NNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILH----PTPTPLPPHYAE 62
           +NT+    R+ WK ILRQ K H+HRR FPVDFRPLRRFIKR++H    PTP P+ PHY E
Sbjct: 2   SNTKCCAARRVWK-ILRQRKFHTHRRPFPVDFRPLRRFIKRLVHSISTPTPIPVHPHYVE 61

Query: 63  RQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYE---------DCEWE 122
           RQFSFNDTPIFHLKFH R  PSASAALF  PRFSCINPKVEF+ YE         D  WE
Sbjct: 62  RQFSFNDTPIFHLKFH-RCPPSASAALFHFPRFSCINPKVEFD-YEFESRVVDDDDGGWE 121

Query: 123 RRNY-----EEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           R         EEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLR DEF D +E
Sbjct: 122 RWRLGGTCGYEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRLDEFFDDDE 177

[Close]

BLAST of CsaV3_4G001110.1 vs. NCBI nr
Match: XP_022934217.1 (uncharacterized protein LOC111441455 [Cucurbita moschata])

HSP 1 Score: 138.7 bits (348), Expect = 4.6e-29
Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 5   TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQF 64
           T++   R+A K  LR WK+H+H   RR+FPVDFR + RFIKR++HPTPTPL P+ AERQF
Sbjct: 4   TKWDAARRAMK-FLRHWKIHTHRRYRRSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQF 63

Query: 65  SFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEE 124
           SFND PI HLK H R  PS                         C++          E E
Sbjct: 64  SFNDNPIVHLKLHRRPPPS-----------------------PPCDY----------EAE 123

Query: 125 EEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Sbjct: 124 EEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE 131

[Close]

BLAST of CsaV3_4G001110.1 vs. NCBI nr
Match: KAG6581289.1 (hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018012.1 hypothetical protein SDJN02_19878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 4.6e-29
Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 5   TRFFHVRKAWKIILRQWKLHSHRR---AFPVDFRPLRRFIKRILHPTPTPLPPHYAERQF 64
           T++   R+A K  LR WK+H+HRR   +FPVDFR + RFIKR++HPTPTPL P+ AERQF
Sbjct: 4   TKWDAARRAMK-FLRHWKIHTHRRYRHSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQF 63

Query: 65  SFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEE 124
           SFND PI HLK H R  PS                         C++          E E
Sbjct: 64  SFNDNPIVHLKLHRRPPPS-----------------------PPCDY----------EAE 123

Query: 125 EEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Sbjct: 124 EEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE 131

[Close]

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL
Match: A0A0A0KYA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.8e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60
           MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ
Sbjct: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60

Query: 61  FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE 120
           FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE
Sbjct: 61  FSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEE 120

Query: 121 EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
Sbjct: 121 EEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 163

[Close]

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL
Match: A0A5D3E0E5 (Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001360 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.6e-59
Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60
           MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQ
Sbjct: 1   MSISTKFFHVRKPWKIL---------RRTFPVDFRPLRRFIKRIVHTTPTPLPHHYAERQ 60

Query: 61  FSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEE 120
           FSFNDTPIFH     RR PSASA  +F IPRFSCINPKVEFERY+DCEWE    EEEEEE
Sbjct: 61  FSFNDTPIFH-----RRPPSASATTMFQIPRFSCINPKVEFERYDDCEWEEEEEEEEEEE 120

Query: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Sbjct: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDDDE 150

[Close]

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL
Match: A0A1S3BZI3 (neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=LOC103494743 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.6e-59
Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 1   MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQ 60
           MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQ
Sbjct: 1   MSISTKFFHVRKPWKIL---------RRTFPVDFRPLRRFIKRIVHTTPTPLPHHYAERQ 60

Query: 61  FSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEE 120
           FSFNDTPIFH     RR PSASA  +F IPRFSCINPKVEFERY+DCEWE    EEEEEE
Sbjct: 61  FSFNDTPIFH-----RRPPSASATTMFQIPRFSCINPKVEFERYDDCEWEEEEEEEEEEE 120

Query: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Sbjct: 121 EEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDDDE 150

[Close]

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL
Match: A0A6J1F231 (uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC111441455 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.2e-29
Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 5   TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQF 64
           T++   R+A K  LR WK+H+H   RR+FPVDFR + RFIKR++HPTPTPL P+ AERQF
Sbjct: 4   TKWDAARRAMK-FLRHWKIHTHRRYRRSFPVDFRHVWRFIKRLIHPTPTPLRPYSAERQF 63

Query: 65  SFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEE 124
           SFND PI HLK H R  PS                         C++          E E
Sbjct: 64  SFNDNPIVHLKLHRRPPPS-----------------------PPCDY----------EAE 123

Query: 125 EEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE 164
           EEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Sbjct: 124 EEEEEEGIDSKAEKFIKMFYEEMRLQSQVSYLPLDWFSDADE 131

[Close]

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL
Match: A0A444XGX3 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095848 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.5e-14
Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 12  KAWKI----ILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPP---HYAERQFSFN 71
           +AWK+    +L   K    +R   ++ R + +++KR+ H T +       HY ER+ SF+
Sbjct: 13  RAWKLLRVSLLWARKGGVFKRRLAMELRLVPKYLKRLGHTTTSSSQSNQIHYFERELSFD 72

Query: 72  DTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE-RYEDCEWERRNYEEEEEEEEEE 131
            TPIFH+K +    P++S     +P   CINP V+F+  +ED   +  N+EEE +++ EE
Sbjct: 73  KTPIFHVKMY---RPNSSMRFLHLPHIPCINPHVDFDYDFEDDNADHNNHEEEWKDDGEE 132

Query: 132 EEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFD 157
           +EE GID +AE+FI  FYE+MK+Q Q+SYL+++
Sbjct: 133 QEE-GIDKRAEEFIAKFYEQMKLQRQISYLQYN 161

[Close]

BLAST of CsaV3_4G001110.1 vs. TAIR 10
Match: AT4G02170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 55  HYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYE 114
           +Y ERQ SF++TP+F++K      P++S    L+P   C  P V+F+   D E + ++Y 
Sbjct: 64  YYGERQLSFDETPLFNVK-KKMHCPTSSMRFLLLP---CFAPPVDFD--YDFEMDGQDYS 123

Query: 115 EEEE----EEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD 161
           +E +    +E   EEE G+D++AE+FI  FYE++K+Q QVSYL++ + +D
Sbjct: 124 DEVQSYGYDESCSEEEKGVDVRAEEFIAKFYEQIKLQRQVSYLKYKQHND 167

[Close]

BLAST of CsaV3_4G001110.1 vs. TAIR 10
Match: AT5G38700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 8.8e-10
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 56  YAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNY-- 115
           Y E+Q SF++TPIF++K H  R  S    L  I R +  +   E +  +D   + R+Y  
Sbjct: 67  YGEKQLSFDETPIFNVKMH--RPTSMRFLLPCIARPADFDYDFELDGTQDDTDDVRSYGY 126

Query: 116 ---------EEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD 161
                    +    +++EEEEE G+D++AE+FI  FYE+MK+Q Q+SYL++ E +D
Sbjct: 127 YDGSCNEKCDRSANDDQEEEEEKGVDVRAEEFIAKFYEQMKLQRQISYLQYKEHND 180

The following BLAST results are available for this feature:

BLAST of CsaV3_4G001110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652950.1	1.2e-85	100.00	uncharacterized protein LOC105435158 [Cucumis sativus] >KGN52841.1 hypothetical ...	[more]
XP_008454304.1	7.3e-59	78.66	PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo] >...	[more]
XP_038906165.1	2.8e-50	69.83	uncharacterized protein LOC120092045 [Benincasa hispida]	[more]
XP_022934217.1	4.6e-29	52.47	uncharacterized protein LOC111441455 [Cucurbita moschata]	[more]
KAG6581289.1	4.6e-29	52.47	hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_4G001110.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G001110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYA9	5.8e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002580 PE=4 SV=1	[more]
A0A5D3E0E5	3.6e-59	78.66	Neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3BZI3	3.6e-59	78.66	neuronal acetylcholine receptor subunit alpha-2-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1F231	2.2e-29	52.47	uncharacterized protein LOC111441455 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A444XGX3	3.5e-14	38.56	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095848 PE=4 SV=1	[more]

BLAST of CsaV3_4G001110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02170.1	2.1e-11	39.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G38700.1	8.8e-10	37.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..134
None	No IPR available	PANTHER	PTHR33265	AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED	coord: 9..160
None	No IPR available	PANTHER	PTHR33265:SF5	COTTON FIBER PROTEIN	coord: 9..160
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 127..157 e-value: 1.8E-10 score: 40.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G001110	CsaV3_4G001110	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G001110.1.exon1	CsaV3_4G001110.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G001110.1.cds1	CsaV3_4G001110.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G001110.1	CsaV3_4G001110.1-protein	polypeptide