CsaV3_3G045730.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G045730.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	SAUR-like auxin-responsive protein family
Location	chr3: 37406365 .. 37412398 (-)
Sequence length	303
RNA-Seq Expression	CsaV3_3G045730.1
Synteny	CsaV3_3G045730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCACAAAGACCACCAAAAGCCCACAAACGGCGGTGCTGAAACACCTACTGAAACGCTGCTCCAGCTTAGGCAGAAATAAGCCCCATTACGACCAACCTGGTCTCCCTTTCGACGTCCCCAAAGGCCATTTTGTTGTCTACGTTGGTCAACACCGAACCAGACACATTGTCCCCATCAAATTTCTCGACCATCCTCCTTTCCAAATCTTGCTCCAACAAGCCGCTGAAGAATTTGGGTTCGATCATGACAGAGGCCTCACTATTCCTTGCGATGAACAAGTCTTTCTAGCCTTAACTTCTTCCCTTCTTACTCAACTTTAAATTCAGACATATATATATATATGTATAACTTAGTAGTTAGTGTTTCTTCTTTTTTTTTTTTTTTTGGTTCTTCTGGCTTAAAATGATGAAGCTGCTGCACTTGCTTCTCTGCCATATAATACTTTGAAAGGAAGAAGGAAAAGCCACGACTCCCAATGTAACAAAAAAAGAATTTGGGGAAATGAAAAATTTGACTAATGACAGTAAAAGAGTGGAAATGTGGTTGCTTGTTTGTTTGATATTGTGAATGTGATTTTGTTTGTCTTTTAATCCACTAATTTAGTCACTGATTTTAAGGGTTTTGTCTACTCTGTTTTGGTTTTAAATTTCCCATTTTTAGCGTTCACGGTTTGGGGTTTCTCGATTCACTCAAACCGTTTTTAGCCGTTAAAACTGTTAGAAAAATATGGAATCCAAAACGCAATGGAATGTTCTGTAAACGCTCTTTGCCCTTTTACCTTTTCCCCTTTTCTCTTTATTATTAATTATTATATGCATATTATTAGGATTTAGGGTGTTGAGATGAGATGAGGTGATCTTATATTATGGTAATAATTTAAAGTAATTAAAGTAGAAGATGAAACATGAAAAGGACAATTTTTGGAAGAGCAGCAGACTGAGTATAGAGGAGAGGAAAGGAGATGAGAGAAGAGGACTCCGCAGTGTCAAATAAAAAGAAAAAAGAAACCCTCAGGATTCGAGGAAGGCATGTGAGTAGGGGCCACAAGCTCAGTAGAAATTTGTGAGCATCGGAGGGTTGGGAATAAAGGATGAGTATAGGTGTAGTGAAGGGGTAAGGCATAGGTGGACATCCACACTTTTCCCTCATTCAATTTGGAAATCACTTCTTCTTTTTTTTTTAGGTCCACTTCAACAAATACAAAACCTCCCCTTTCTTCATTTCTACACTCAGTTCCAAAATTCATTCCTAAATTCAAATCCTATTTATTGTATAGTTTGTGCTTATCATTTTTACAACTATTACTATTACACCTTTAAGATTCAATTTTAACATCCAACCATTGAAATCTATCATACTTTTTTAGTGTATGAAATGTAAATTTGTGGTGTATTCATATTTTTTTATATTATGCATTATAGACCTAATTTTTTAAACTATCTACAAAAAAAAAACTAAAAATTCCTTTATTAAGAACTCAACTTTTATAATTGAAAATTTAGAGATTTAATTGCAACTAACACTATTTTCAGTGGTGATATTTGCAACTTGTTCCGTATTTCTATTAAAAATTGGGTATAAGCTTAAGACAAACATCTACACATGTACATATTGATGAACTAATGATCTATATTAATGGGTAATATTTTAGTTAAAAAAGGTTACCATGCAACAACAACTTATGATTAAATATTTAAGTAAACGACGTGAAAATAGATGTAATGGGAGATTTATGAATGACTTTGGTTTTGTTATTGTTGTTGTTATGCATAGATTTATTGATTAGGACATTTATGCGTTTGTCTTTAAATACTAACTATTTAATTATAAAAATAGTTTAATAGGTCAATGGCAATAGTGTTAAATGGAAAGTTAGATAGAGAGGAAAACATCTGACGCAAAATAATTTAAGACTTTCTAAATGTAAACACTTATAATTGACCCTATTTTTAGAATATTGAGGACTCTTTTTAACTAACTATCTCTCATCCCTTCATCCCTTCATCTCTTCATCCCTTCATAATGTTAAATTACATAACTTATAGTTATAATGTTCTTTTTCAAAAATCTAATGGTAGAAAATGATTCATTGGGGTATATTATAAAATTATCATTGCATTTTTTTTTCTAAATCTCTATAACATGGCAAATTCTCTTTTTTTTTTTTTTTTTGTCATTTAGAGAAATGCTACATTTAACATTGATTATTAAATCAATTCTCTTATTCTCAATTTCACCAAGGTTATTTAATTTTGAGGATATCATATGATATTTCATTTTAAAATCAAATTGATTTTCTATTCTAAATTTTATAAGTGTATTTGGCAAATTATTTTAATTGTTTTGTAGGTCGAGTTTTCTTCTCCAAAATATAAATTAATAAGAGACATTTTCAAATATAACAAAATTGCACAACTAATCTACGATTGAACATACTAATTCTAAAATTTTACTATCTTTTAAAAATATTTTTCAATCGTTTTCAAATTTACAATAACTCTCTCATTAATAACTAGTAGCACTCAAAGTTAGTTTGGAAATTTTCCAAACAAATTATGTTGATATCATAATTTTTTTATATAAATATTCTTATAATTCTCTTAATTTTTTAATTCTTGGTTACACCAATTTCCTTTAACAACCAAAATAAATAAGTAAATAGTTAAAAACATAAAATTCTATAACATTTTACAAAATAAAGTATTCTCTTGAAACATAAAAAAAATAGTCAAATAAAAAAAGTATTCGACTAATTATTAACAAATACCATTACTGTCGTTCAATTTTGTTAAAATATATATGTCTAAAATTATTTGTGTTATATTTATTATCATTCTTCTTATTATAGTTTATATACTTTTAATTAAAATCAATTTTAATCATTTATTTATTTTAGATAAACGAGTTGCAAATAGACAACACAAGTCTTCAAAATGAGCATATATTTGTACTATAAATTTCGAATACATCGTTTATAATTTTTCTTTTTTTTTTCTTCTTTTATGTTATTAGTATTTCTAAAAATTTTAGTAAAATCCAAACACTTACAATATATGTTATATATTATAGTTTTAATTTATATTATAAATTAGTATGAAATTATAATATAGTTGAACTTTATGCAATTGAAAAGGTTAGTTTTCAAATTGAATATAAAACCTTCTATAAATATGAATAGATGTTTTCACAATGAAAAATATTAATGGATGTATGGTTTAGGGTTTGAGTTTTAATAAAAAAAATGTCGTAATTGGATTTCTGATGCCTAACAAAAAATTTCAATAATAAACTACTACTCTAATAGAATTATTATAACACTAAGAAACTATACACAATGATTAATTCTCTTTTAGTTTAGTTTAAGTGAATCTTAAATTATTGCTCATAAATTTAAATATCAAAATAGAATCTAAACAAAAACAAACTTAAAATATAATTTAAATTTTTATAATATATATTTTGGTTTTTGGTTTTCTCTTCCTAAAAAAGAAAAAAGTTGATATCTTTTCAAGATATTGCTGTCTAAACTTATAAACCATTAACCTAAATTTAAAATATAAATAACTAAAAGAGAACCTTGAAAAAGAAAATTATTAAAATTTTTTAAAAAAAAAGTTGAATATTTTTTGTTTTTGAAATAAATAATTATACAATTATAGATTTTCTTTATACCAAATAGATTACCAAAAATCAAAATAATCTCGAAATAAATATACTTTACAAAAATTAACAAAATATCATTCTTTATTGGACTTTATCTTCCATTAATTAATATTAATAATTTAATAGGCAATGAAAATTTTCTAATATTAGTAATTTTTCATTTAGAATCATTGCCCTATTTTAAACTTATTGTTATTTTTAAATCCCATATTGATAAAATTGTTATCAATATATTAAATAATGATATATAATAGCAAACATCAAATTAAAAAACTAACAAAAATAAACCTATCAATAGTGTCTCTTAATTAACTCTTTTTTCTTTTCCTAATTAGCAAAAGGTTTCTTTTTCATTTTCCAAAATTCCTAATTAACATTTTAAAAACACATTTCTCTAATACTATCTTAACTATATTACTAATTAATCTAAAAGATTTTGCTTCAAGTTTTTCATCCCTCACTCCTCTTGTTGTGTGCTAACTTTTTTTCAACAAATGTTTTTTGTTCTTTTATTTTATTTAATTCCTTTCTCTCTTTTTCTTCTTCTTCTAGATTTCGTCATTATTGCCTGTTAAATCAGATTTAAAACTACTAAATATAATAAAATTTTCATAGATTATTCTTTTAGGAGATCTTTGGTTATATGGAAAAAGTATTTTGTACCCATCCCTATATTATGGTAATAGAATATGTATATATTTGCATTATCTATAAACACATTAATCATTTATAAAAAATACGTGCAACTATTCCATGAATAACTTAGCATGAGTTTGCATTATCAATTTCAACAAGGTAAAAATAACTCAATTGTTAATTTAAATACTTTTTTTAAAAAAAAAATATTTTGTAGATTTATTTGTGATATCAATGTATCTTATATGGACACATCCATCATCATGTAAAATTGAAATTTTAATATCCAAATTGCATGGATTATTTAAATTCTTGTTTTGGATTTATTTTTTTCTTCTTATTTAAATCATTGGCCTTTCCAATCTCTCAATGTTACTTCGACATTCATGCAAGAGATTTCCTTTGTTCTCTTCCCGAGATTCTCTCTCTCTCTAAACATATTAGTCTCCTATTTTCAAATTTCTAATTTCATATATGTTCAAATTTATCTCATTTTTTATGTATATTCATAGCAAGCACTCATGTGCATTAACTTAGACATCTTATATATTATATTATATTATATTATATTATATGCATGAACTCAAAGTTGAAATTAATGATTTTTTTTGTTTATAAGATTCCAAGACAACGTGTAGAACATTGTATAACTTCCTTTCTCGTTAAATTAAAAATTACCTCAATAATTTGTTATTTATTTTAAAAAATAATCTTACAGTATTTGATCGTCCTATACTTTTTGTATATATTTCAAATTCTTAAGACTCTTTTCATGAAATTAGTTGAAACATTGGTGTGGTCGTGACATAGAAAAACACGGCCATGATGTCTAGGTTTCAATTTCTTTTACGGATCCCTATACCACTTCATGTTCTAATTTTCATTTTATATTTCAAGGATAGGAGTTTCATAATTTCTCAGTCCCCATTTAAATAATGCATTTGAATTAATATAATTAACTAATAAATGAATGAGATGTTATTGAGTAGATAACAAATAGGAGTGATAAGAAAGGCAATTGAAGTCGTAATGATTGATTCAGTATTAGTGTTAATAATCCTGAAATGAATGCATTTTGTTTTAACATGATTGCATCCCCTTTTAAGAATAAACAGATTATATTTAAGAGAAAAATTGGAAGGAATATGGGGGAAAAAAGAGAAAGCTGAAAAAGAAATAGATTAAATTTGAGAATAGAATAAAAAGGGAAAAGAATAAGATTTGAAAAGATGTAGAAAGGAGAGAGTAGTTAAGATTATGAGTATATGAAGCTTTATTTAATTATTAATATATAGTTCAGTGAACAAACATAGAATATACATATTGTTCTTTCAATCTAATAAAATAGGAAAAAGAATATAAAAGAAAGAAAAGAAGAAGAACAAATGGGATTTTCATCAACAACAGACCAGCGCTCGTGATTGCATCAAATCAAGTAGTTCCCATGTCACTTTATGGATTTACTACTAATTTAATTCTTTGTTTTTTAAACTTATGGGCTTAAATTTAAACAAAACAAAACAACATCTTCTCCATCTCTACTCTACTAATCCAACTTTTTAATAATATCTCACACTCTAAATTCAACTTTATTACACTTATGAAAACAATCACCAAATTTAATGAATTTGGTCTTTTCATTCTTATGTTATATTATTTGATCAAAGGATGAGAAGAAGACATCAGTTGGCCCTCACAAAGGTTTTTGAATATGGCTTTATTAAATGA

mRNA sequence

ATGGCGATCACAAAGACCACCAAAAGCCCACAAACGGCGGTGCTGAAACACCTACTGAAACGCTGCTCCAGCTTAGGCAGAAATAAGCCCCATTACGACCAACCTGGTCTCCCTTTCGACGTCCCCAAAGGCCATTTTGTTGTCTACGTTGGTCAACACCGAACCAGACACATTGTCCCCATCAAATTTCTCGACCATCCTCCTTTCCAAATCTTGCTCCAACAAGCCGCTGAAGAATTTGGGATGAGAAGAAGACATCAGTTGGCCCTCACAAAGGTTTTTGAATATGGCTTTATTAAATGA

Coding sequence (CDS)

ATGGCGATCACAAAGACCACCAAAAGCCCACAAACGGCGGTGCTGAAACACCTACTGAAACGCTGCTCCAGCTTAGGCAGAAATAAGCCCCATTACGACCAACCTGGTCTCCCTTTCGACGTCCCCAAAGGCCATTTTGTTGTCTACGTTGGTCAACACCGAACCAGACACATTGTCCCCATCAAATTTCTCGACCATCCTCCTTTCCAAATCTTGCTCCAACAAGCCGCTGAAGAATTTGGGATGAGAAGAAGACATCAGTTGGCCCTCACAAAGGTTTTTGAATATGGCTTTATTAAATGA

Protein sequence

MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVPIKFLDHPPFQILLQQAAEEFGMRRRHQLALTKVFEYGFIK*

Homology

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BLAST of CsaV3_3G045730.1 vs. NCBI nr
Match: KAE8651341.1 (hypothetical protein Csa_001672 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 2.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
           MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1   MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61  IKFLDHPPFQILLQQAAEEFGMRRRHQLALTKVFEYGFIK 101
           IKFLDHPPFQILLQQAAEEFGMRRRHQLALTKVFEYGFIK
Sbjct: 61  IKFLDHPPFQILLQQAAEEFGMRRRHQLALTKVFEYGFIK 100

[Close]

BLAST of CsaV3_3G045730.1 vs. NCBI nr
Match: XP_004136391.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 8.0e-40
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 81

[Close]

BLAST of CsaV3_3G045730.1 vs. NCBI nr
Match: XP_008466496.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0063273.1 auxin-induced protein 15A [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 6.8e-39
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAITKTTKSPQTAVLKHLLKRCSSLGRNK HYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKTHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 81

[Close]

BLAST of CsaV3_3G045730.1 vs. NCBI nr
Match: XP_038899566.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29
Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAI K +K PQTAVLK LLKRCSSLGR K  YD+ GLP DVPKGHFVVYVGQ RTRHIVP
Sbjct: 1  MAIRKASKMPQTAVLKQLLKRCSSLGR-KAQYDEAGLPLDVPKGHFVVYVGQDRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 80

[Close]

BLAST of CsaV3_3G045730.1 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-27
Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAI K+TK PQTAVLK +LKRCSSLG+ +  YD+ GLP DVPKGHFVVYVG++R+RHIVP
Sbjct: 1  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          I +L+HP FQILLQQAA+EFG    H + LT
Sbjct: 61 ITYLNHPQFQILLQQAADEFGF--DHDMGLT 89

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.2e-23
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 5  KTTKSPQTAVLKHLLKRCSSLG-RNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVPIKF 64
          KT+K  QTA+LK +LKRCSSLG +N   YD+  LP DVPKGHF VYVG++R+R+IVPI F
Sbjct: 6  KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 65 LDHPPFQILLQQAAEEFGMRRRHQLALT 92
          L HP FQ LLQ+A EEFG    H + LT
Sbjct: 66 LTHPEFQSLLQRAEEEFGF--DHDMGLT 91

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-19
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 3  ITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVPIK 62
          I K+ K  Q   +K ++K+CSS G+N    D  GLP DVPKGHFVVYVG+ R R+IVPI 
Sbjct: 4  IRKSHKQTQALAIKKIIKKCSSFGKNN---DDSGLPNDVPKGHFVVYVGERRNRYIVPIS 63

Query: 63 FLDHPPFQILLQQAAEEFG 82
           LDHP FQ LLQ++ EEFG
Sbjct: 64 CLDHPTFQDLLQRSEEEFG 79

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1  MAITKTTK--SPQTAVLKHLLKRCSSLGR----NKPHYDQ-PGLPFDVPKGHFVVYVGQH 60
          MAI +++K  S Q A +K ++KRCSSL +    N  +Y+Q   LP DVPKGHF VYVG +
Sbjct: 1  MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61 RTRHIVPIKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          R+R+IVPI +L H  FQ LL+ A EEFG    H + LT
Sbjct: 61 RSRYIVPISWLHHSEFQTLLRLAEEEFGF--DHDMGLT 96

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-07
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 40 DVPKGHFVVYVGQHRTRHIVPIKFLDHPPFQILLQQAAEEFG 82
          +VPKG+ VVYVG    R ++P+ +L+ P FQ LL QA EEFG
Sbjct: 24 EVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFG 65

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 40 DVPKGHFVVYVGQHRTRHIVPIKFLDHPPFQILLQQAAEEFG 82
          D PKG+  VYVG+   R ++P+ +L+ P FQ LL QA EEFG
Sbjct: 16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFG 57

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL
Match: A0A0A0LH47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872040 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.9e-40
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 81

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL
Match: A0A5A7V5B1 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G00960 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAITKTTKSPQTAVLKHLLKRCSSLGRNK HYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKTHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 81

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL
Match: A0A1S3CRD7 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103503888 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAITKTTKSPQTAVLKHLLKRCSSLGRNK HYDQPGLPFDVPKGHFVVYVGQHRTRHIVP
Sbjct: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKTHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFG 82
          IKFLDHPPFQILLQQAAEEFG
Sbjct: 61 IKFLDHPPFQILLQQAAEEFG 81

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.6e-28
Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAI K+TK PQTAVLK +LKRCSSLG+ +  YD+ GLP DVPKGHFVVYVG++R+RHIVP
Sbjct: 1  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          I +L+HP FQILLQQAA+EFG    H + LT
Sbjct: 61 ITYLNHPQFQILLQQAADEFGF--DHDMGLT 89

[Close]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.6e-28
Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MAI K+TK PQTAVLK +LKRCSSLG+ +  YD+ GLP DVPKGHFVVYVG++R+RHIVP
Sbjct: 1  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          I +L+HP FQILLQQAA+EFG    H + LT
Sbjct: 61 ITYLNHPQFQILLQQAADEFGF--DHDMGLT 89

[Close]

BLAST of CsaV3_3G045730.1 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 5.4e-26
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MA+ +++K  QTA+LK +LKRCSSLG+ K  YD+ GLP DVPKGHF VYVG+ RTR+IVP
Sbjct: 1  MAVKRSSKLTQTAMLKQILKRCSSLGK-KQCYDEEGLPLDVPKGHFPVYVGEKRTRYIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFGMR 84
          I FL HP F ILLQQA EEFG R
Sbjct: 61 ISFLTHPEFLILLQQAEEEFGFR 82

[Close]

BLAST of CsaV3_3G045730.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.9e-25
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVP 60
          MA+ +++K  QTA+LK +LKRCSSL +N+  YD+ GLP DVPKGHF VYVG+ R+R+IVP
Sbjct: 1  MAVKRSSKLTQTAMLKQILKRCSSLAKNQ-CYDEDGLPVDVPKGHFPVYVGEKRSRYIVP 60

Query: 61 IKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          I FL HP F+ LLQQA EEFG    H + LT
Sbjct: 61 ISFLTHPKFKSLLQQAEEEFGF--NHDMGLT 88

[Close]

BLAST of CsaV3_3G045730.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 6.6e-24
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 5  KTTKSPQTAVLKHLLKRCSSLG-RNKPHYDQPGLPFDVPKGHFVVYVGQHRTRHIVPIKF 64
          KT+K  QTA+LK +LKRCSSLG +N   YD+  LP DVPKGHF VYVG++R+R+IVPI F
Sbjct: 6  KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 65 LDHPPFQILLQQAAEEFGMRRRHQLALT 92
          L HP FQ LLQ+A EEFG    H + LT
Sbjct: 66 LTHPEFQSLLQRAEEEFGF--DHDMGLT 91

[Close]

BLAST of CsaV3_3G045730.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 5.6e-23
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGRNKPHY---DQPGLPFDVPKGHFVVYVGQHRTRH 60
          MA+ K  K  QTA++K +LKRCSSLG+ + +    D+ G P +VPKGHFVVYVG++R R+
Sbjct: 1  MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 61 IVPIKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          +VPI FL  P FQ+LLQQA EEFG    H + LT
Sbjct: 61 VVPISFLTRPEFQLLLQQAEEEFGF--DHDMGLT 92

[Close]

BLAST of CsaV3_3G045730.1 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1  MAITKTTKSPQTAVLKHLLKRCSSLGR------NKPH-YDQPGLPFDVPKGHFVVYVGQH 60
          MAI   +K  QT ++K +LKRCSSLG+      N  H +D   LP DVPKGHFVVYVG +
Sbjct: 1  MAIINRSKLTQTTMIKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGN 60

Query: 61 RTRHIVPIKFLDHPPFQILLQQAAEEFGMRRRHQLALT 92
          R R+++PI FL  P FQ+LLQQA EEFG    H + LT
Sbjct: 61 RVRYVLPISFLTRPEFQLLLQQAEEEFGF--DHNMGLT 96

The following BLAST results are available for this feature:

BLAST of CsaV3_3G045730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651341.1	2.7e-51	100.00	hypothetical protein Csa_001672 [Cucumis sativus]	[more]
XP_004136391.1	8.0e-40	100.00	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
XP_008466496.1	6.8e-39	98.77	PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0063273.1 auxin-induced ...	[more]
XP_038899566.1	1.7e-29	85.19	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_022941161.1	1.6e-27	69.23	auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-...	[more]

BLAST of CsaV3_3G045730.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	9.2e-23	62.50	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	2.8e-19	58.23	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9SL45	1.1e-15	51.02	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P33080	7.1e-07	54.76	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	1.2e-06	52.38	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CsaV3_3G045730.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH47	3.9e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872040 PE=3 SV=1	[more]
A0A5A7V5B1	3.3e-39	98.77	Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CRD7	3.3e-39	98.77	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103503888 PE=3 SV=1	[more]
A0A6J1J0M7	7.6e-28	69.23	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219...	[more]
A0A6J1FKC5	7.6e-28	69.23	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114465...	[more]

BLAST of CsaV3_3G045730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38860.1	5.4e-26	67.47	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	5.9e-25	60.44	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	6.6e-24	62.50	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	5.6e-23	55.32	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	1.4e-21	54.08	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 36..90 e-value: 1.5E-16 score: 60.3
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 6..91
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..91

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G045730	CsaV3_3G045730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G045730.1.exon2	CsaV3_3G045730.1.exon2	exon
CsaV3_3G045730.1.exon1	CsaV3_3G045730.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G045730.1.cds2	CsaV3_3G045730.1.cds2	CDS
CsaV3_3G045730.1.cds1	CsaV3_3G045730.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G045730.1	CsaV3_3G045730.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin