
CsaV3_3G041470.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAATAGTTACGTAAATTTCTCTCCCTATAATTCCTTGGCATTTCCTTATCAGAAATAAAAGAAATAGGAAGACAATAGGAAATTCACATTTTTGTTGCAAAAAGGCAAAGTGGCTAATTCTTATCTTTTAACAAAAATACCCCCAACAAATTTATTTATATGAAAATGAAAACCCAAAACAATATTCAAACCCTAAAACGAAAAAATAACATTTAATAGTATTTATTTTAATTTTTCGATTGGTCCCCAGCCACACTACACACTATACCGATTAATTTCGTTGCCTATAAGATATTTCCTTCCCTTCCCTTCCTTCAAAAATAAAACCATCTTACCAAAAATATTCAAACAAATAAATCACTCCCAATTTTTCAAATTCCCTAAAAAAAAAATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGGTATGGATTTCTAGTTAATTTTGTTCTTGGTTGAATTTGAAGCGATTGGTTTGTGATCGGAGGAATTTTTGTGGTGGTTTAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTCATCTTCTTCTTCCTCCTCTGTTTTTCTCCCCAATTTTTATGCCAATTTACCATATTATCCTTTCGCTTTTTCATTTGTTATTTTTATGTTTTCTACAGATATTTTCTATTTTGAGAAAAGCCGTGCCAAATATTTAATTCACTTTTTTGCCTTTTTTTTTCTTCTTTTTTTAAGTTTTGATATTTAGTTTAAGAGTGGAAACCTATACTTAAAAAAGTTTCGAAATATTACATTTGTACCATTTAATTTTTTTATCATGTTATTTATTTTTAATTCTTTATTTTAAATTTAGTTTTCATTTACTCCCTACATTTCAATATTTAGTTTCAATTTTTGTTTGTTAATAGCACTGCTTGTTTTGTTATTCATACTTCAATAATTAAGTTCAAATGATTCTATCATAATTTTTTTACTTATAATTAATTAATTAATTTTTAGATATTAAAATTGATGTTGAGTATTTAAACCATATAAAATTCAAAAATCATGCTACATTTTCATGACTTAAAATACAGGAATTAAAAAGTTCCTTTTTTTTTTCTAAATGTAAAAAGAAAAAAAAAAGTTTTTCTTTCTTTCTTTTCAACATTAAAAGCATGCTTAGATATTGGTGGTTGAGTTGATAAGTGTACTGAGAATAGATGTGTATTAGGTAATATAATAAAAATGTCCAATAAAAAGACAAAACAATGTCTCCTTTCTTTTAACATTTAGAAAACAAAATCAAATTTATCATTATTTTTTTCAAGTTTACTAAATTAAAAATAGTAGAATTCTTATTTTAACTTTGGTACAAAATATTTGAACAATTATACACCGACAAATAATCACCCTGAATCTAGAGCTTTGGATTTCTAGTGCACTCTCTCATTTTCGAAAAATAAAATAAAATTATCAACATATTCTCTCTCTCTTTTTTTTTTTTCTTTTCAGAATACATACTCTTTTTTGCTCTATTTCACTCTTTTTTAAAAAATTTAAAAATTAAGAATATATACTCTTTTTCTTTTTCTTTTTTAGATTATATACTATCTTAATCTCTCTTTTTTTTCTGAAACTGTATTAAAAATTAAGATTATATATACTCTCTTACTTTTTTTTTTATTTAAGAATTATAATCTCTTACTTAAGAATTAAGAAAAAGGAACCCCCAATCAAATCAACAGTGATGGTGATATATATTATAAATGTCTATTTTATTGGACGGGCGGAAATTAATTATAATTTTTTTAAAATTGGAAATTTAGTGGTAATGATGTATGAGCTGCGCCACTTCATCAAAAAGAACAGTAAAAAATTATAAAAAAAGGGATGGAAAAGTGCAATTTATGCCACCTGAGAAGTGACGTGGATGAAGTGTACGGAAGATATTTCGATAAGTGTCCCCACCAGTTTGGCAGATATTATATATAAAAAGACTATTGGCAGATACTTTCTAAGGAAAGCAGCCTTAATTGCTTTTTAATTCACCAAAAGTCATCTTAATTGAGAATATGCTTTTCCATCTTTTCCAGTTTAGACCTTTCAAACCTTTTTTCTTTTTAACTCTTTTTCTATTTTATTTTCATATATATTTTTTACATGACTTAGTAATAATTGATGTATACTCTTATGGTTCGTGAATTGAATTTTATGCGGTTGATGCAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTGTAAGAGCATCTTATTGTTGTTTACCTCTTACTCACAATCTTCTCTTAATTTCCTTTCGCTAAGGTTCACTGCTTTTTTATATGTAATTTTTGGCAGATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGTAAGCAAAGCAATTATAATTGTTTCTTTTTTTGGCTTTTTGTTCTTAGCTGGAAGTTTTGTGGGTATCTGGAAAAATCTTAAACAAGATTTTGTTTTGATTGAATTCCAAATTTGGACCCTATAGTTTGGAGAAAATTTGTTTATTTATGAGATTTTATCAAACTATAAAGCTGGGGTTAACTATGTGTAGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGACATCCAATCGATGGGATCATGCAGCTGGAACTTCAAGTCATACCAAAATCAACTAGTTCAATTATTGTATAAATTAATGTGTAGCTCCTATAATAAAAGTTGTAGTTTAAGTTGTAGCTTTAGAAAAACTTAAGGTAAGGTTAGCTTTAATTGTCTTGCAATTTATTTGTTTTTTTAGTTTCGAGAGAAGAATGAATCTGAAATAGAGATTCATTTTTCTTTTTATTACTCTTGTTATTTTACAAGTGTGAGTTTTGATCTGATTTTTTTTACAATAATCAATCATAAAATTGGTTCTTCTTTTC ATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGA ATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGA MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATEKHTHSLSLH* Homology
BLAST of CsaV3_3G041470.1 vs. NCBI nr
Match: APT69294.1 (LSi6 [Cucumis sativus var. sativus] >KGN59571.1 hypothetical protein Csa_000858 [Cucumis sativus]) HSP 1 Score: 506.9 bits (1304), Expect = 1.0e-139 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. NCBI nr
Match: NP_001292702.1 (aquaporin NIP2-1-like [Cucumis sativus] >ACU29604.1 Si transport-like protein 2 [Cucumis sativus]) HSP 1 Score: 505.4 bits (1300), Expect = 3.0e-139 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. NCBI nr
Match: NP_001380719.1 (aquaporin NIP2-2 [Cucumis melo]) HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132 Identity = 246/261 (94.25%), Postives = 256/261 (98.08%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. NCBI nr
Match: XP_038906096.1 (aquaporin NIP2-2-like [Benincasa hispida]) HSP 1 Score: 420.2 bits (1079), Expect = 1.3e-113 Identity = 219/256 (85.55%), Postives = 234/256 (91.41%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. NCBI nr
Match: XP_023528272.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.5 bits (1046), Expect = 8.6e-110 Identity = 208/253 (82.21%), Postives = 230/253 (90.91%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 284.3 bits (726), Expect = 1.4e-75 Identity = 140/244 (57.38%), Postives = 189/244 (77.46%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.3e-73 Identity = 134/218 (61.47%), Postives = 179/218 (82.11%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.0e-73 Identity = 136/223 (60.99%), Postives = 178/223 (79.82%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.3e-72 Identity = 131/221 (59.28%), Postives = 175/221 (79.19%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.6e-72 Identity = 135/232 (58.19%), Postives = 180/232 (77.59%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy TrEMBL
Match: A0A1L7B7J9 (LSi6 OS=Cucumis sativus var. sativus OX=869827 GN=LSi6 PE=2 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.0e-140 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy TrEMBL
Match: A0A0A0LHR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G826650 PE=3 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.0e-140 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy TrEMBL
Match: G8XUV4 (Si transport-like protein 2 OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy TrEMBL
Match: A0A1S3B8P6 (aquaporin NIP2-1-like OS=Cucumis melo OX=3656 GN=LOC103487003 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 246/261 (94.25%), Postives = 256/261 (98.08%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. ExPASy TrEMBL
Match: A0A6J1J0H5 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111482345 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.5e-109 Identity = 206/253 (81.42%), Postives = 229/253 (90.51%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 224.2 bits (570), Expect = 1.2e-58 Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 222.6 bits (566), Expect = 3.6e-58 Identity = 117/223 (52.47%), Postives = 151/223 (67.71%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 211.8 bits (538), Expect = 6.4e-55 Identity = 109/224 (48.66%), Postives = 152/224 (67.86%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 203.4 bits (516), Expect = 2.3e-52 Identity = 109/242 (45.04%), Postives = 157/242 (64.88%), Query Frame = 0
BLAST of CsaV3_3G041470.1 vs. TAIR 10
Match: AT1G80760.1 (NOD26-like intrinsic protein 6;1 ) HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51 Identity = 99/223 (44.39%), Postives = 146/223 (65.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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