CsaV3_3G041310.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041310.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Dof-type domain-containing protein
Location	chr3: 33707030 .. 33709807 (+)
Sequence length	1509
RNA-Seq Expression	CsaV3_3G041310.1
Synteny	CsaV3_3G041310.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGTATTGAAATTAGAAAGAATGTAAAAGTATTTGAACAGTATGATATTTGTAATTTTGTATTGTACATAATATAATAATAATAATAATAATAGGAAAAAGAAAAAGAAAAAGAAAAAAAAGGAAAAAAGGGAAAAAGCGGAGTTTGAGCGTTGTGGTAGTCCGGATGTAAAATTTCTCCACGCTGACACTTCACTCGTGTCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTTGGATTTCATTTCCAAAATGAAAATTTAAAATACCAAATTATTCACAATAAAAATTTAAAACAAAAACAAAAAAACAGGGCAGAAATGTCGGAGCCAAAAGATCCGGCGATCAAGCTCTTTGGCAAGACGATTCCTCTACCGGACCCTTCTCCGGCCACTCCTCACCTTCCTTCTTCTTTGCCTATTCTCTCACCCCCTCACCATACCACTCCCCTTCCTAATCATGACCACGATTCTTCTTCTTCAACCTTCGATGTCGATGCTGAAGATCTGGAACTCGATAAGGTATTCACTTTCCTTTGATCGCTTCTCTTTTTTCTTTTCACCTACCCATTTCCTTTATTGCCAGTATCTTTCTTCCCTTTTTATTCCTTCTATTCATTTTGTTGACTTCATACATCTTCATCTCTTCCTTCTACCAAATTTAGGTTTCTTCTTTCATTCTCTTCATTTCTGTTCCTTGGTGGGTCTTTTCTGATTCTGTTGATGACTATGTTCACTTTTCATTTTTGCACTCAGATTTACCAATTTGGAAAGCTTGTTATGTTTACTTAATTTAGTGATGCTGCTACTTTTTTGCTGTAATTTCCATAATTGAGTATGAAGGCTTTTTAGAAATGTTGTTTTCATTCTTTCAGAATTTGGGTTTGGGTTATTGAGTTTGTCAGGAGTTTCTACACATGTCTTTTTGAAACTTTAGCTTTGTTGCTTAAATTCAGTAATGTTGTTTTCATGTGTTCATAAAGGTTTTTGTTTTGTATTTGTGTTTTGGTGTATTAGGATGCTGTGAGCGAGAAATCAGTTGGGGCTAAGCTGGAAAATGGAGATGGAGGGTTGTCTGTCTCGACTGAAGAGTTCACGAATTCAGATACTTCTGTAGTGAGATCAGAAAATTCTAAAGTACTTTCTGGCGACGAAAGTAATCCATCTACTACTACAAAGACTGATGAACAGAACGAAACAAGTAATTCGCAAGAGAAGACTCTCAAGAAACCCGACAAGATACTTCCATGCCCTCGCTGTAATAGTATGGATACCAAGTTCTGTTACTATAATAATTACAATGTTAATCAACCGCGCCACTTCTGTAAGAACTGTCAAAGGTATTGGACTGCTGGAGGGACAATGAGGAACGTTCCTGTTGGTGCAGGACGTCGGAAGAACAAAAGCTCCGCTTCTCACCATCGTCAGATTATTGTTTCGGAAGCCCTTCAGCATGCTCGAACCGATGTTCCCAATGGTATCCATCATTCTACCCTCAAACCTAATGCAAATGTATTGGCATTTGGTTCAGATGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATCAAACAAGGCAGAATAGTACTAGAAATGGCTTTCAAAAACCTGAAGCTCCGAAAATTCCTGTGGCTTATGAGAATGGTGAAAACGATGATCAATCTCCGGAATCTGCTCCAACTCCATCATTTATTAATAATGAAGAAGGCAAAACTGGGCCACAAGATCAAGTTATTCATAATTGTCAAGGCTTTTTACCTCCTCACGTTCCATTCTTTCCTGGGACTCCTTGGCCTTACCCATGGAATTCACCACAATGGAGCTCTCCTGTTCCGCCTCCTACTTTCTATCCACCTGGCATTCCTATGCCGTTCTATCCGACCGCCCCATTTTGGGGTTGTACGGTTCCTGGCGCCTGGCCCATTCCATGGGTTTCCCAGCCGCCATCTCTAAGCCCTGTTCCCCAAAATCACGCTCCCAACTCGCCAACGTTGGGGAAACATTCAAGAGATGAGAATGTGACCAGGCAAAGTGATCTTGGGGAAGACGAGCAGCAGAAAGATACCAAAACTGAGAAATGTCTTTGGATACCTAAAACATTGAGGATCGATGACCCTGGCGAAGCAGCTAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAGACTGATTCAGTTAGTGAAGGGCTCTTCAAGGTTTTTCAGTCAAAGAAGATTGACGAAAAGAATCACAAAACGGAAGCCTCTCCAGTCTTGCAAGTTAATCCAGCTGCATTGTCCAGATCAATCAAATTTCACGAAAGCTCGTAAAAGGATACAACAATGCTTTTCCCCAAATGTGCCATCAAAGTTTTCACTGCACTCCATCTGGATAGTACAAACTTTAAACAAACTTACATCTGCCACAAGTTGATCCTTCTGTTTCAAATCTGTATAAAACCATTAGATCCATCCAAGGAAAAGAACAGTAGATCCCACAGCAGTTACCTTCTAGAAGAAAAGCCCTCGAGTTTCGGTAGCAGGAGGACGAAAATGACTTTGATTTTTATTGTGTACTTGTAGTGTTGAAGAAGTAGATGGCATTTTGTTTGTAGTTTGAAGTTTTGTCTTTCTTCTGAATCATGATGTACATATACATATATATATATATATATAAATGTATGGGATCCAGGAAGAGAGAGCTAGTACAGGAATGAGTGAGGTGTAGTAGCAGTACCAATAATAACTAAAAATGTGTACTTAAATAAAGTTTTAG

mRNA sequence

ATGTCGGAGCCAAAAGATCCGGCGATCAAGCTCTTTGGCAAGACGATTCCTCTACCGGACCCTTCTCCGGCCACTCCTCACCTTCCTTCTTCTTTGCCTATTCTCTCACCCCCTCACCATACCACTCCCCTTCCTAATCATGACCACGATTCTTCTTCTTCAACCTTCGATGTCGATGCTGAAGATCTGGAACTCGATAAGGATGCTGTGAGCGAGAAATCAGTTGGGGCTAAGCTGGAAAATGGAGATGGAGGGTTGTCTGTCTCGACTGAAGAGTTCACGAATTCAGATACTTCTGTAGTGAGATCAGAAAATTCTAAAGTACTTTCTGGCGACGAAAGTAATCCATCTACTACTACAAAGACTGATGAACAGAACGAAACAAGTAATTCGCAAGAGAAGACTCTCAAGAAACCCGACAAGATACTTCCATGCCCTCGCTGTAATAGTATGGATACCAAGTTCTGTTACTATAATAATTACAATGTTAATCAACCGCGCCACTTCTGTAAGAACTGTCAAAGGTATTGGACTGCTGGAGGGACAATGAGGAACGTTCCTGTTGGTGCAGGACGTCGGAAGAACAAAAGCTCCGCTTCTCACCATCGTCAGATTATTGTTTCGGAAGCCCTTCAGCATGCTCGAACCGATGTTCCCAATGGTATCCATCATTCTACCCTCAAACCTAATGCAAATGTATTGGCATTTGGTTCAGATGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATCAAACAAGGCAGAATAGTACTAGAAATGGCTTTCAAAAACCTGAAGCTCCGAAAATTCCTGTGGCTTATGAGAATGGTGAAAACGATGATCAATCTCCGGAATCTGCTCCAACTCCATCATTTATTAATAATGAAGAAGGCAAAACTGGGCCACAAGATCAAGTTATTCATAATTGTCAAGGCTTTTTACCTCCTCACGTTCCATTCTTTCCTGGGACTCCTTGGCCTTACCCATGGAATTCACCACAATGGAGCTCTCCTGTTCCGCCTCCTACTTTCTATCCACCTGGCATTCCTATGCCGTTCTATCCGACCGCCCCATTTTGGGGTTGTACGGTTCCTGGCGCCTGGCCCATTCCATGGGTTTCCCAGCCGCCATCTCTAAGCCCTGTTCCCCAAAATCACGCTCCCAACTCGCCAACGTTGGGGAAACATTCAAGAGATGAGAATGTGACCAGGCAAAGTGATCTTGGGGAAGACGAGCAGCAGAAAGATACCAAAACTGAGAAATGTCTTTGGATACCTAAAACATTGAGGATCGATGACCCTGGCGAAGCAGCTAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAGACTGATTCAGTTAGTGAAGGGCTCTTCAAGGTTTTTCAGTCAAAGAAGATTGACGAAAAGAATCACAAAACGGAAGCCTCTCCAGTCTTGCAAGTTAATCCAGCTGCATTGTCCAGATCAATCAAATTTCACGAAAGCTCGTAA

Coding sequence (CDS)

ATGTCGGAGCCAAAAGATCCGGCGATCAAGCTCTTTGGCAAGACGATTCCTCTACCGGACCCTTCTCCGGCCACTCCTCACCTTCCTTCTTCTTTGCCTATTCTCTCACCCCCTCACCATACCACTCCCCTTCCTAATCATGACCACGATTCTTCTTCTTCAACCTTCGATGTCGATGCTGAAGATCTGGAACTCGATAAGGATGCTGTGAGCGAGAAATCAGTTGGGGCTAAGCTGGAAAATGGAGATGGAGGGTTGTCTGTCTCGACTGAAGAGTTCACGAATTCAGATACTTCTGTAGTGAGATCAGAAAATTCTAAAGTACTTTCTGGCGACGAAAGTAATCCATCTACTACTACAAAGACTGATGAACAGAACGAAACAAGTAATTCGCAAGAGAAGACTCTCAAGAAACCCGACAAGATACTTCCATGCCCTCGCTGTAATAGTATGGATACCAAGTTCTGTTACTATAATAATTACAATGTTAATCAACCGCGCCACTTCTGTAAGAACTGTCAAAGGTATTGGACTGCTGGAGGGACAATGAGGAACGTTCCTGTTGGTGCAGGACGTCGGAAGAACAAAAGCTCCGCTTCTCACCATCGTCAGATTATTGTTTCGGAAGCCCTTCAGCATGCTCGAACCGATGTTCCCAATGGTATCCATCATTCTACCCTCAAACCTAATGCAAATGTATTGGCATTTGGTTCAGATGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATCAAACAAGGCAGAATAGTACTAGAAATGGCTTTCAAAAACCTGAAGCTCCGAAAATTCCTGTGGCTTATGAGAATGGTGAAAACGATGATCAATCTCCGGAATCTGCTCCAACTCCATCATTTATTAATAATGAAGAAGGCAAAACTGGGCCACAAGATCAAGTTATTCATAATTGTCAAGGCTTTTTACCTCCTCACGTTCCATTCTTTCCTGGGACTCCTTGGCCTTACCCATGGAATTCACCACAATGGAGCTCTCCTGTTCCGCCTCCTACTTTCTATCCACCTGGCATTCCTATGCCGTTCTATCCGACCGCCCCATTTTGGGGTTGTACGGTTCCTGGCGCCTGGCCCATTCCATGGGTTTCCCAGCCGCCATCTCTAAGCCCTGTTCCCCAAAATCACGCTCCCAACTCGCCAACGTTGGGGAAACATTCAAGAGATGAGAATGTGACCAGGCAAAGTGATCTTGGGGAAGACGAGCAGCAGAAAGATACCAAAACTGAGAAATGTCTTTGGATACCTAAAACATTGAGGATCGATGACCCTGGCGAAGCAGCTAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAGACTGATTCAGTTAGTGAAGGGCTCTTCAAGGTTTTTCAGTCAAAGAAGATTGACGAAAAGAATCACAAAACGGAAGCCTCTCCAGTCTTGCAAGTTAATCCAGCTGCATTGTCCAGATCAATCAAATTTCACGAAAGCTCGTAA

Protein sequence

MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDAEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS*

Homology

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BLAST of CsaV3_3G041310.1 vs. NCBI nr
Match: XP_004147502.1 (cyclic dof factor 2 [Cucumis sativus] >KGN59557.1 hypothetical protein Csa_001057 [Cucumis sativus])

HSP 1 Score: 1015.0 bits (2623), Expect = 2.2e-292
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60
           MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA
Sbjct: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60

Query: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120
           EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT
Sbjct: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120

Query: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180
           KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG
Sbjct: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180

Query: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240
           GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA
Sbjct: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240

Query: 241 PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE 300
           PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE
Sbjct: 241 PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE 300

Query: 301 GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA 360
           GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA
Sbjct: 301 GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA 360

Query: 361 PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT 420
           PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT
Sbjct: 361 PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT 420

Query: 421 KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE 480
           KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE
Sbjct: 421 KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE 480

Query: 481 ASPVLQVNPAALSRSIKFHESS 503
           ASPVLQVNPAALSRSIKFHESS
Sbjct: 481 ASPVLQVNPAALSRSIKFHESS 502

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BLAST of CsaV3_3G041310.1 vs. NCBI nr
Match: XP_008443398.1 (PREDICTED: cyclic dof factor 2 [Cucumis melo] >KAA0053774.1 cyclic dof factor 2 [Cucumis melo var. makuwa] >TYK25629.1 cyclic dof factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 931.0 bits (2405), Expect = 4.3e-267
Identity = 471/515 (91.46%), Postives = 483/515 (93.79%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLP-SSLPILSPPHHTTPLPNHDHDSSSST---- 60
           MSEPKDPAIKLFGKTIPLP+PSPATPHLP SSLPI +P  HTT + NHDHDSSSST    
Sbjct: 1   MSEPKDPAIKLFGKTIPLPEPSPATPHLPSSSLPIPTPADHTTAVANHDHDSSSSTLSPE 60

Query: 61  --FDVDAEDLELDKDAVSEKSVGAKLE------NGDGGLSVSTEEFTNSDTSVVRSENSK 120
              DVD EDLE+DKDA+SEKS G KLE      +GDGGLSVSTEEFTNSDTSVV++ENSK
Sbjct: 61  ANIDVDGEDLEVDKDAISEKSGGTKLEDRDGDGDGDGGLSVSTEEFTNSDTSVVKTENSK 120

Query: 121 VLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180
           VLSG+ESNPS+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR
Sbjct: 121 VLSGEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180

Query: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240
           HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL
Sbjct: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240

Query: 241 KPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSP 300
           KPN NVLAFGSDAPLCESMASILNIAD+TRQNSTRNGFQKPEA KIPVAYENGENDDQS 
Sbjct: 241 KPNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQ 300

Query: 301 ESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360
           ESAPTP FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF
Sbjct: 301 ESAPTP-FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360

Query: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTR 420
           YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPP LSPV QNHAPNSPTLGKHSRDENVT+
Sbjct: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPPLSPVAQNHAPNSPTLGKHSRDENVTK 420

Query: 421 QSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVF 480
           QSD GE EQQKD KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F
Sbjct: 421 QSDFGEHEQQKDNKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAF 480

Query: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS
Sbjct: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 514

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BLAST of CsaV3_3G041310.1 vs. NCBI nr
Match: XP_038905359.1 (cyclic dof factor 2 [Benincasa hispida])

HSP 1 Score: 874.4 bits (2258), Expect = 4.7e-250
Identity = 444/514 (86.38%), Postives = 463/514 (90.08%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSST----- 60
           MSEPKDPAIKLFGKTIPLP+ SPATP LPSSLPIL+     T   NHDHDSSSS+     
Sbjct: 1   MSEPKDPAIKLFGKTIPLPEASPATPQLPSSLPILTASDKNTAAVNHDHDSSSSSLSPEG 60

Query: 61  -FDVDAEDLELDKDAVSEKSVGAKLE----NGDGGLSVSTEEFTNSDTSVVRSENSKVLS 120
             D D EDLE+DK+ V EKS   KLE    +GDGGLS STEEFTNSDTS +RS+NSKVLS
Sbjct: 61  NIDGDGEDLEVDKETVREKSGETKLEDGDGDGDGGLSGSTEEFTNSDTSAMRSDNSKVLS 120

Query: 121 GDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFC 180
           G+ESNPS+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFC
Sbjct: 121 GEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFC 180

Query: 181 KNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKP- 240
           KNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDV NGIHHSTLKP 
Sbjct: 181 KNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVSNGIHHSTLKPN 240

Query: 241 -NANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPE 300
            N NVLAFGSDAPLCESMASILNIAD+TRQNSTRNGFQKPEA KIPVAYENGENDDQS E
Sbjct: 241 GNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQE 300

Query: 301 SAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFY 360
           SA TPSFI+NEEGKTGPQDQVIHNCQGFLPP +PFFPG PWPYPWNSPQWSSPVPPPTFY
Sbjct: 301 SAATPSFIDNEEGKTGPQDQVIHNCQGFLPPQIPFFPGAPWPYPWNSPQWSSPVPPPTFY 360

Query: 361 PPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQ 420
            PGIPMPFYPTAPFWGCTVPGAW +PWV+QPPSL+PV QNHAPNSPTLGKHSRDENVT+Q
Sbjct: 361 SPGIPMPFYPTAPFWGCTVPGAWTVPWVTQPPSLNPVAQNHAPNSPTLGKHSRDENVTKQ 420

Query: 421 SDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQ 480
           SD G DEQQKD K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTD VSEGLF+ FQ
Sbjct: 421 SDFGGDEQQKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDPVSEGLFQAFQ 480

Query: 481 SKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           SKK DEKN K EASPVLQVNPAALSRSIKFHESS
Sbjct: 481 SKKTDEKNRKAEASPVLQVNPAALSRSIKFHESS 514

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BLAST of CsaV3_3G041310.1 vs. NCBI nr
Match: XP_022156784.1 (cyclic dof factor 2 [Momordica charantia])

HSP 1 Score: 792.0 bits (2044), Expect = 3.1e-225
Identity = 406/510 (79.61%), Postives = 433/510 (84.90%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSL-PILSPPHHTTPLPNHDHDSSSSTF--- 60
           MSEPKDPAIKLFGKTI  P+ SPATP   SSL  ++S         +HDHDS SS     
Sbjct: 1   MSEPKDPAIKLFGKTIAPPEASPATPPPSSSLATLVSAADGNYAAVSHDHDSPSSRLSPE 60

Query: 61  ---DVDAEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDE 120
              D D EDLE +K+ +  KS G + E+GD  +SVSTEEFTNSDTS VRSENSKV SG+E
Sbjct: 61  GNTDGDGEDLEAEKEPMGGKSGGTEQEDGDRAMSVSTEEFTNSDTSAVRSENSKVPSGEE 120

Query: 121 SNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC 180
           SN S+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC
Sbjct: 121 SNLSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC 180

Query: 181 QRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANV 240
           QRYWTAGGTMRNVPVGAGRRKNK+SASH RQIIVSEALQH+R +V N IHHS LKPN NV
Sbjct: 181 QRYWTAGGTMRNVPVGAGRRKNKNSASHQRQIIVSEALQHSRNNVTNVIHHSALKPNGNV 240

Query: 241 LAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPV-AYENGENDDQSPESAPT 300
           LAFGSD PLCESMASILN+AD+TRQN TRNGF KPEA KIP    +NGENDDQS ESA T
Sbjct: 241 LAFGSDTPLCESMASILNLADKTRQNGTRNGFHKPEALKIPAPPNQNGENDDQSQESAAT 300

Query: 301 PSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGI 360
           PSFIN+EEGK GPQ+QVIHNCQGFLPP +PFFPG PWPYPWNSP+WSSPVPPPTFYPPG 
Sbjct: 301 PSFINSEEGKAGPQEQVIHNCQGFLPPQIPFFPGAPWPYPWNSPRWSSPVPPPTFYPPGF 360

Query: 361 PMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLG 420
           PMPFYPTAPFWGCTVPGAW IPW+ QPPSL+ V QNHAPNSPTLGKHSRDENV + SD G
Sbjct: 361 PMPFYPTAPFWGCTVPGAWTIPWLPQPPSLNLVAQNHAPNSPTLGKHSRDENVNKPSDSG 420

Query: 421 EDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKI 480
           EDEQQ + K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F   K 
Sbjct: 421 EDEQQNENKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFHQPKG 480

Query: 481 DEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           DEKNHK E SPVLQVNPAALSRSIKFHESS
Sbjct: 481 DEKNHKAEPSPVLQVNPAALSRSIKFHESS 510

[Close]

BLAST of CsaV3_3G041310.1 vs. NCBI nr
Match: KAG7022214.1 (Cyclic dof factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 706.1 bits (1821), Expect = 2.2e-199
Identity = 375/517 (72.53%), Postives = 413/517 (79.88%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTF---- 60
           MSE KDPAIKLFGKTIPLP+ SPA+P LPSSLPI      +T   NHD DS SST     
Sbjct: 1   MSELKDPAIKLFGKTIPLPEASPASP-LPSSLPI----DDSTATVNHDRDSPSSTVSPEA 60

Query: 61  ---------DVDAEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSK 120
                    D D EDLE DK+ +  KS G  +E+ DG          + D ++   E+SK
Sbjct: 61  NIDGDDDDDDDDGEDLEADKEIIGGKSNGTNMEDLDG----------DGDENLSNLESSK 120

Query: 121 VLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180
           V+ G+ESNPS+TTK DEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR
Sbjct: 121 VVCGEESNPSSTTKNDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180

Query: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240
           HFCKNCQRYWTAGGTMRNVPVGAGRRKNK+SASH+RQIIVSEA QHARTDV N + HS+L
Sbjct: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSL 240

Query: 241 KPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSP 300
           +PN NVLAFG D PLCESM SILNIADQTRQN +RNGF+KPEA KIPVAYENGE+D    
Sbjct: 241 RPNGNVLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQS 300

Query: 301 ESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFF-PGTPWPYPWNSPQWSSPV-PPP 360
           +         NEE K+G QDQVIH+CQGFL P +PFF PG PWPYPW+SPQWSSPV PPP
Sbjct: 301 QEC-----CANEEAKSGRQDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVPPPP 360

Query: 361 TFYPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENV 420
            FYPPGIP+PFYP APFWGCTVP  W +PW+ QPPSLSP+     PNSPTLGKHSRDENV
Sbjct: 361 NFYPPGIPVPFYPAAPFWGCTVPNPWTLPWLPQPPSLSPI----TPNSPTLGKHSRDENV 420

Query: 421 TRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK 480
           ++QSD  +  Q+KD K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK
Sbjct: 421 SKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK 480

Query: 481 VFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
            F+SKK DEKNHKTE+SPVLQVNPAALSRSIKFHESS
Sbjct: 481 AFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS 492

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 314.3 bits (804), Expect = 2.5e-84
Identity = 232/522 (44.44%), Postives = 277/522 (53.07%), Query Frame = 0


Query: 6   DPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDAEDLEL 65
           DPAIKLFGKTIPLP+         S    L+     T +P    DS +     D +D E+
Sbjct: 3   DPAIKLFGKTIPLPELG-VVDSSSSYTGFLT----ETQIPVRLSDSCTG----DDDDEEM 62

Query: 66  DKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSV----VRSENSKVLSGDE--SNPSTT 125
               +  +      + GDGG    T++    D+      +R+E++ V +     +  + T
Sbjct: 63  GDSGLGREEGD---DVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTET 122

Query: 126 TKTDEQNE----TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQR 185
           TK  + NE    T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQR
Sbjct: 123 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 182

Query: 186 YWTAGGTMRNVPVGAGRRKNKSSASH---HRQIIVSEALQH-ARTDV--PNGIHHSTLKP 245
           YWTAGGTMRNVPVGAGRRKNKS ASH   H  I  +EA+Q  ARTD+  PNG        
Sbjct: 183 YWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNG-------- 242

Query: 246 NANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKP-EAPKIPVAYENGENDDQSPE 305
            AN+L FGSD+ LCESMAS LN+ +++    T+   Q+P E  KI V             
Sbjct: 243 -ANLLTFGSDSVLCESMASGLNLVEKSLL-KTQTVLQEPNEGLKITVPLNQ--------- 302

Query: 306 SAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTP--WPYPWNSPQWSSPVPPPT 365
                   N E G   P             P VP FPG P  WPY WN   W+       
Sbjct: 303 -------TNEEAGTVSPL------------PKVPCFPGPPPTWPYAWNGVSWTI------ 362

Query: 366 FYPPGIPMPFYPTAPFWGC--TVPGAW-PIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDE 425
                  +PFYP   +W C    PGAW    W+ QP S    P    PNSPTLGKHSRDE
Sbjct: 363 -------LPFYPPPAYWSCPGVSPGAWNSFTWMPQPNS----PSGSNPNSPTLGKHSRDE 422

Query: 426 NVTRQS---DLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVS 485
           N        D  E   ++ +K E+CLW+PKTLRIDDP EAAKSSIW TLGIK D+     
Sbjct: 423 NAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTF 457

Query: 486 EGLFKVFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
                  + K    +       P LQ NPAALSRS  FHESS
Sbjct: 483 GAFRSSTKEKSSLSEGRLPGRRPELQANPAALSRSANFHESS 457

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 9.8e-81
Identity = 217/515 (42.14%), Postives = 267/515 (51.84%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60
           M E +DPAIKLFG  IP P                                S+ T + D 
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVF----------------------------ESAVTVEDDE 61

Query: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120
           ED     D  S + V  +L + +   + +   F NS    +  E +      ES     +
Sbjct: 62  EDDWSGGDDKSPEKVTPELSDKNNN-NCNDNSFNNSKPETLDKEEATSTDQIES-----S 121

Query: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180
            T E N+ +    KTLKKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAG
Sbjct: 122 DTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAG 181

Query: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240
           GTMRNVPVGAGRRKNKSS+SH+R I +SEAL+ AR D         L+ N  VL+FG +A
Sbjct: 182 GTMRNVPVGAGRRKNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEA 241

Query: 241 P---LCESMASILNI-ADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFI 300
               +   M  ++ +  DQ   N  RN F      ++    ENG  DD S  S+ T S  
Sbjct: 242 QQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQRLVARVENG--DDCSSGSSVTTSNN 301

Query: 301 NNEEGKTGPQDQVI---------HNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360
           ++ +        V+         +N  G+        PG PWPY WN       +PPP F
Sbjct: 302 HSVDESRAQSGSVVEAQMNNNNNNNMNGY-----ACIPGVPWPYTWN-----PAMPPPGF 361

Query: 361 Y-PPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHA-PNSPTLGKHSRDENV 420
           Y PPG PMPFYP            W IP +    S SP+ Q  +  NSPTLGKH RDE  
Sbjct: 362 YPPPGYPMPFYP-----------YWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGS 421

Query: 421 TRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK 480
           +++ +  E +Q+       C+ +PKTLRIDDP EAAKSSIW TLGIKN+       G+FK
Sbjct: 422 SKKDNETERKQKAG-----CVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAMCKAG-GMFK 446

Query: 481 VFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHE 501
            F  K     N K E SPVL  NPAALSRS  FHE
Sbjct: 482 GFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHE 446

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-55
Identity = 166/398 (41.71%), Postives = 197/398 (49.50%), Query Frame = 0


Query: 107 KVLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQP 166
           +V   +E      T TD+     + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQP
Sbjct: 23  EVADEEEEKNQNKTLTDQ-----SEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQP 82

Query: 167 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNK--SSASHHRQIIVSEALQHARTDVPNGIHH 226
           RHFCK CQRYWT+GGTMR+VP+GAGRRKNK  S  SH+  + +SE               
Sbjct: 83  RHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET-------------- 142

Query: 227 STLKPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDD 286
                N  VL+F              ++ D  + +S R G Q     K+    EN  ND+
Sbjct: 143 -----NGPVLSF--------------SLGDDQKVSSNRFGNQ-----KLVARIEN--NDE 202

Query: 287 QSPESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPP 346
           +S          N   G          NC          FPG  WPY WN          
Sbjct: 203 RSNN--------NTSNGL---------NC----------FPGVSWPYTWN---------- 262

Query: 347 PTFYPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDEN 406
           P FY      P YP            W +P +S P S SP        + TLGKHSRD  
Sbjct: 263 PAFY------PVYP-----------YWSMPVLSSPVSSSP--------TSTLGKHSRD-- 296

Query: 407 VTRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLF 466
                   EDE  K  +    + +PKTLRIDDP EAAKSSIW TLGIKN       E +F
Sbjct: 323 --------EDETVKQKQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIKN-------EVMF 296

Query: 467 KVFQSKKIDEKNHK--TEASPVLQVNPAALSRSIKFHE 501
             F SKK  + ++K  TE S VL  NPAALSRSI FHE
Sbjct: 383 NGFGSKKEVKLSNKEETETSLVLCANPAALSRSINFHE 296

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.8e-41
Identity = 173/507 (34.12%), Postives = 242/507 (47.73%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPN-HDHDSSSSTFDVD 60
           MS+ +D  IKLFG+TI          + PSS   LSP H  +  P+  D  SSSS+    
Sbjct: 1   MSKSRDTEIKLFGRTI--TSLLDVNCYDPSS---LSPVHDVSSDPSKEDSSSSSSSCSPT 60

Query: 61  AEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTT 120
              + +      ++S   K    D  +     E   + + +    +SK     +S  +TT
Sbjct: 61  IGPIRVPVKKSEQESNKFK----DPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTT 120

Query: 121 TKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTA 180
           T T   + TS  +   LKKPDK++PCPRC S +TKFCYYNNYNVNQPR+FC+NCQRYWTA
Sbjct: 121 TTT---STTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTA 180

Query: 181 GGTMRNVPVGAGRRKNKS--SASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFG 240
           GG+MRNVPVG+GRRKNK   S++H+        LQ    D  N         +  +L+FG
Sbjct: 181 GGSMRNVPVGSGRRKNKGWPSSNHY--------LQVTSEDCDN-------NNSGTILSFG 240

Query: 241 SDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFIN 300
           S      S +S+                            E G++  QS ++A   +   
Sbjct: 241 S------SESSVT---------------------------ETGKH--QSGDTAKISADSV 300

Query: 301 NEEGKTGPQDQVIHNCQGFLPPHVPFFP--GTPWPYPWNSPQWSSPVPPPTFYPPGIPMP 360
           ++E K         + QGFLPP V   P   +PWPY     QWS   P  +FY    P+P
Sbjct: 301 SQENK---------SYQGFLPPQV-MLPNNSSPWPY-----QWSPTGPNASFY----PVP 360

Query: 361 FYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDE 420
           FY     WGCTVP             + P  +     S  LGK SRD+   R +D     
Sbjct: 361 FY-----WGCTVP-------------IYPTSE----TSSCLGKRSRDQTEGRIND----- 396

Query: 421 QQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSK-KIDE 480
                 T +   + ++LR++   EA+KS++W+ L  K +K  +    LF  F +K   + 
Sbjct: 421 TNTTITTTRARLVSESLRMNI--EASKSAVWSKLPTKPEK-KTQGFSLFNGFDTKGNSNR 396

Query: 481 KNHKTEASPVLQVNPAALSRSIKFHES 502
            +  +E S  LQ NPAA+SR++ F ES
Sbjct: 481 SSLVSETSHSLQANPAAMSRAMNFRES 396

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot
Match: Q9LQX4 (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-29
Identity = 104/279 (37.28%), Postives = 142/279 (50.90%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60
           MS+ +D  +KLFG TI    P    P+  SS        H  P    D  SSSS+  +  
Sbjct: 1   MSQVRDTPVKLFGWTI---TPVSHDPYSSSS--------HVLP----DSSSSSSSSSLSL 60

Query: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120
               ++  +V++ +   KL +     S  T            SENS     D+ +   TT
Sbjct: 61  RPHMMNNQSVTD-NTSLKLSSNLNNESKET------------SENS-----DDQHSEITT 120

Query: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180
            T E+ +T+      LKKPDKILPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAG
Sbjct: 121 ITSEEEKTTE-----LKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAG 180

Query: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGS-- 240
           G+MR VPVG+GRRKNK   S       S+   H  ++  +  + S+ K    +L+F S  
Sbjct: 181 GSMRIVPVGSGRRKNKGWVS-------SDQYLHITSEDTDNYNSSSTK----ILSFESSD 230

Query: 241 ----DAPLCESMASILNIADQTRQNSTRNGFQKPEAPKI 274
               + P  +S    +N    +++ +   G   P+A  +
Sbjct: 241 SLVTERPKHQSNEVKINAEPVSQEPNNFQGLLPPQASPV 230

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL
Match: A0A0A0LG12 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G825020 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.1e-292
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60
           MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA
Sbjct: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60

Query: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120
           EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT
Sbjct: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120

Query: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180
           KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG
Sbjct: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180

Query: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240
           GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA
Sbjct: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240

Query: 241 PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE 300
           PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE
Sbjct: 241 PLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFINNEE 300

Query: 301 GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA 360
           GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA
Sbjct: 301 GKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTA 360

Query: 361 PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT 420
           PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT
Sbjct: 361 PFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDT 420

Query: 421 KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE 480
           KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE
Sbjct: 421 KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEKNHKTE 480

Query: 481 ASPVLQVNPAALSRSIKFHESS 503
           ASPVLQVNPAALSRSIKFHESS
Sbjct: 481 ASPVLQVNPAALSRSIKFHESS 502

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL
Match: A0A5A7UEW6 (Cyclic dof factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007890 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.1e-267
Identity = 471/515 (91.46%), Postives = 483/515 (93.79%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLP-SSLPILSPPHHTTPLPNHDHDSSSST---- 60
           MSEPKDPAIKLFGKTIPLP+PSPATPHLP SSLPI +P  HTT + NHDHDSSSST    
Sbjct: 1   MSEPKDPAIKLFGKTIPLPEPSPATPHLPSSSLPIPTPADHTTAVANHDHDSSSSTLSPE 60

Query: 61  --FDVDAEDLELDKDAVSEKSVGAKLE------NGDGGLSVSTEEFTNSDTSVVRSENSK 120
              DVD EDLE+DKDA+SEKS G KLE      +GDGGLSVSTEEFTNSDTSVV++ENSK
Sbjct: 61  ANIDVDGEDLEVDKDAISEKSGGTKLEDRDGDGDGDGGLSVSTEEFTNSDTSVVKTENSK 120

Query: 121 VLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180
           VLSG+ESNPS+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR
Sbjct: 121 VLSGEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180

Query: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240
           HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL
Sbjct: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240

Query: 241 KPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSP 300
           KPN NVLAFGSDAPLCESMASILNIAD+TRQNSTRNGFQKPEA KIPVAYENGENDDQS 
Sbjct: 241 KPNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQ 300

Query: 301 ESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360
           ESAPTP FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF
Sbjct: 301 ESAPTP-FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360

Query: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTR 420
           YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPP LSPV QNHAPNSPTLGKHSRDENVT+
Sbjct: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPPLSPVAQNHAPNSPTLGKHSRDENVTK 420

Query: 421 QSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVF 480
           QSD GE EQQKD KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F
Sbjct: 421 QSDFGEHEQQKDNKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAF 480

Query: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS
Sbjct: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 514

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL
Match: A0A1S3B7G1 (cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.1e-267
Identity = 471/515 (91.46%), Postives = 483/515 (93.79%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLP-SSLPILSPPHHTTPLPNHDHDSSSST---- 60
           MSEPKDPAIKLFGKTIPLP+PSPATPHLP SSLPI +P  HTT + NHDHDSSSST    
Sbjct: 1   MSEPKDPAIKLFGKTIPLPEPSPATPHLPSSSLPIPTPADHTTAVANHDHDSSSSTLSPE 60

Query: 61  --FDVDAEDLELDKDAVSEKSVGAKLE------NGDGGLSVSTEEFTNSDTSVVRSENSK 120
              DVD EDLE+DKDA+SEKS G KLE      +GDGGLSVSTEEFTNSDTSVV++ENSK
Sbjct: 61  ANIDVDGEDLEVDKDAISEKSGGTKLEDRDGDGDGDGGLSVSTEEFTNSDTSVVKTENSK 120

Query: 121 VLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180
           VLSG+ESNPS+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR
Sbjct: 121 VLSGEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180

Query: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240
           HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL
Sbjct: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240

Query: 241 KPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSP 300
           KPN NVLAFGSDAPLCESMASILNIAD+TRQNSTRNGFQKPEA KIPVAYENGENDDQS 
Sbjct: 241 KPNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQ 300

Query: 301 ESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360
           ESAPTP FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF
Sbjct: 301 ESAPTP-FINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360

Query: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTR 420
           YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPP LSPV QNHAPNSPTLGKHSRDENVT+
Sbjct: 361 YPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPPLSPVAQNHAPNSPTLGKHSRDENVTK 420

Query: 421 QSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVF 480
           QSD GE EQQKD KTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F
Sbjct: 421 QSDFGEHEQQKDNKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAF 480

Query: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS
Sbjct: 481 QSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 514

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL
Match: A0A6J1DUM3 (cyclic dof factor 2 OS=Momordica charantia OX=3673 GN=LOC111023617 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 1.5e-225
Identity = 406/510 (79.61%), Postives = 433/510 (84.90%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSL-PILSPPHHTTPLPNHDHDSSSSTF--- 60
           MSEPKDPAIKLFGKTI  P+ SPATP   SSL  ++S         +HDHDS SS     
Sbjct: 1   MSEPKDPAIKLFGKTIAPPEASPATPPPSSSLATLVSAADGNYAAVSHDHDSPSSRLSPE 60

Query: 61  ---DVDAEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDE 120
              D D EDLE +K+ +  KS G + E+GD  +SVSTEEFTNSDTS VRSENSKV SG+E
Sbjct: 61  GNTDGDGEDLEAEKEPMGGKSGGTEQEDGDRAMSVSTEEFTNSDTSAVRSENSKVPSGEE 120

Query: 121 SNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC 180
           SN S+TTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC
Sbjct: 121 SNLSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNC 180

Query: 181 QRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANV 240
           QRYWTAGGTMRNVPVGAGRRKNK+SASH RQIIVSEALQH+R +V N IHHS LKPN NV
Sbjct: 181 QRYWTAGGTMRNVPVGAGRRKNKNSASHQRQIIVSEALQHSRNNVTNVIHHSALKPNGNV 240

Query: 241 LAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPV-AYENGENDDQSPESAPT 300
           LAFGSD PLCESMASILN+AD+TRQN TRNGF KPEA KIP    +NGENDDQS ESA T
Sbjct: 241 LAFGSDTPLCESMASILNLADKTRQNGTRNGFHKPEALKIPAPPNQNGENDDQSQESAAT 300

Query: 301 PSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGI 360
           PSFIN+EEGK GPQ+QVIHNCQGFLPP +PFFPG PWPYPWNSP+WSSPVPPPTFYPPG 
Sbjct: 301 PSFINSEEGKAGPQEQVIHNCQGFLPPQIPFFPGAPWPYPWNSPRWSSPVPPPTFYPPGF 360

Query: 361 PMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLG 420
           PMPFYPTAPFWGCTVPGAW IPW+ QPPSL+ V QNHAPNSPTLGKHSRDENV + SD G
Sbjct: 361 PMPFYPTAPFWGCTVPGAWTIPWLPQPPSLNLVAQNHAPNSPTLGKHSRDENVNKPSDSG 420

Query: 421 EDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKI 480
           EDEQQ + K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F   K 
Sbjct: 421 EDEQQNENKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFHQPKG 480

Query: 481 DEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           DEKNHK E SPVLQVNPAALSRSIKFHESS
Sbjct: 481 DEKNHKAEPSPVLQVNPAALSRSIKFHESS 510

[Close]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL
Match: A0A6J1KZ32 (cyclic dof factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500061 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.4e-199
Identity = 378/518 (72.97%), Postives = 414/518 (79.92%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTF---- 60
           MSE KDPAIKLFGKTIPLP+ SPA+P LPSSLPI      +T   NHD DS SST     
Sbjct: 1   MSELKDPAIKLFGKTIPLPEASPASP-LPSSLPI----DDSTATVNHDRDSPSSTVSPDG 60

Query: 61  ---------DVDAEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSK 120
                    D D EDLE DK+ +  KS G  LE+ DG          + D ++   EN K
Sbjct: 61  NIDGDDDDDDDDGEDLEADKEIIGGKSNGTNLEDLDG----------DGDENLSNLENCK 120

Query: 121 VLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180
           V+ G+ESNPS+TTK DEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR
Sbjct: 121 VVCGEESNPSSTTKNDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPR 180

Query: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTL 240
           HFCKNCQRYWTAGGTMRNVPVGAGRRKNK+SASH+RQIIVSEA QHARTDV N + HS+L
Sbjct: 181 HFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSL 240

Query: 241 KPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGEND-DQS 300
           +PN NVLAF SD PLCESM SILNIADQTRQ  TRNGF+KPEA KIPVAYENGE+D  QS
Sbjct: 241 RPNGNVLAFSSDTPLCESMTSILNIADQTRQKGTRNGFKKPEALKIPVAYENGEHDHHQS 300

Query: 301 PESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFF-PGTPWPYPWNSPQWSSPV-PP 360
            ES        NEE K+G QDQVIH+CQGFL P +PFF PG PWPYPW+SPQWSSPV PP
Sbjct: 301 QESCA------NEEAKSGRQDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVPPP 360

Query: 361 PTFYPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDEN 420
           P FYPPGIP+PFYP APFWGC VP  W +PW+ QPPSLSP+     PNSPTLGKHSRDEN
Sbjct: 361 PNFYPPGIPVPFYPAAPFWGCNVPNPWTLPWLPQPPSLSPI----TPNSPTLGKHSRDEN 420

Query: 421 VTRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLF 480
           V++QSD  +  Q+KD K+E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLF
Sbjct: 421 VSKQSDSRDAAQEKDNKSERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLF 480

Query: 481 KVFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
           K F+SKK DEKNHKT++SPVLQVNPAALSRSIKFHESS
Sbjct: 481 KAFESKKGDEKNHKTKSSPVLQVNPAALSRSIKFHESS 492

[Close]

BLAST of CsaV3_3G041310.1 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-85
Identity = 232/522 (44.44%), Postives = 277/522 (53.07%), Query Frame = 0


Query: 6   DPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDAEDLEL 65
           DPAIKLFGKTIPLP+         S    L+     T +P    DS +     D +D E+
Sbjct: 3   DPAIKLFGKTIPLPELG-VVDSSSSYTGFLT----ETQIPVRLSDSCTG----DDDDEEM 62

Query: 66  DKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSV----VRSENSKVLSGDE--SNPSTT 125
               +  +      + GDGG    T++    D+      +R+E++ V +     +  + T
Sbjct: 63  GDSGLGREEGD---DVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTET 122

Query: 126 TKTDEQNE----TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQR 185
           TK  + NE    T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQR
Sbjct: 123 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 182

Query: 186 YWTAGGTMRNVPVGAGRRKNKSSASH---HRQIIVSEALQH-ARTDV--PNGIHHSTLKP 245
           YWTAGGTMRNVPVGAGRRKNKS ASH   H  I  +EA+Q  ARTD+  PNG        
Sbjct: 183 YWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNG-------- 242

Query: 246 NANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKP-EAPKIPVAYENGENDDQSPE 305
            AN+L FGSD+ LCESMAS LN+ +++    T+   Q+P E  KI V             
Sbjct: 243 -ANLLTFGSDSVLCESMASGLNLVEKSLL-KTQTVLQEPNEGLKITVPLNQ--------- 302

Query: 306 SAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTP--WPYPWNSPQWSSPVPPPT 365
                   N E G   P             P VP FPG P  WPY WN   W+       
Sbjct: 303 -------TNEEAGTVSPL------------PKVPCFPGPPPTWPYAWNGVSWTI------ 362

Query: 366 FYPPGIPMPFYPTAPFWGC--TVPGAW-PIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDE 425
                  +PFYP   +W C    PGAW    W+ QP S    P    PNSPTLGKHSRDE
Sbjct: 363 -------LPFYPPPAYWSCPGVSPGAWNSFTWMPQPNS----PSGSNPNSPTLGKHSRDE 422

Query: 426 NVTRQS---DLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVS 485
           N        D  E   ++ +K E+CLW+PKTLRIDDP EAAKSSIW TLGIK D+     
Sbjct: 423 NAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTF 457

Query: 486 EGLFKVFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
                  + K    +       P LQ NPAALSRS  FHESS
Sbjct: 483 GAFRSSTKEKSSLSEGRLPGRRPELQANPAALSRSANFHESS 457

[Close]

BLAST of CsaV3_3G041310.1 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-85
Identity = 232/522 (44.44%), Postives = 277/522 (53.07%), Query Frame = 0


Query: 6   DPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDAEDLEL 65
           DPAIKLFGKTIPLP+         S    L+     T +P    DS +     D +D E+
Sbjct: 3   DPAIKLFGKTIPLPELG-VVDSSSSYTGFLT----ETQIPVRLSDSCTG----DDDDEEM 62

Query: 66  DKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSV----VRSENSKVLSGDE--SNPSTT 125
               +  +      + GDGG    T++    D+      +R+E++ V +     +  + T
Sbjct: 63  GDSGLGREEGD---DVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTET 122

Query: 126 TKTDEQNE----TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQR 185
           TK  + NE    T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQR
Sbjct: 123 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 182

Query: 186 YWTAGGTMRNVPVGAGRRKNKSSASH---HRQIIVSEALQH-ARTDV--PNGIHHSTLKP 245
           YWTAGGTMRNVPVGAGRRKNKS ASH   H  I  +EA+Q  ARTD+  PNG        
Sbjct: 183 YWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNG-------- 242

Query: 246 NANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKP-EAPKIPVAYENGENDDQSPE 305
            AN+L FGSD+ LCESMAS LN+ +++    T+   Q+P E  KI V             
Sbjct: 243 -ANLLTFGSDSVLCESMASGLNLVEKSLL-KTQTVLQEPNEGLKITVPLNQ--------- 302

Query: 306 SAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTP--WPYPWNSPQWSSPVPPPT 365
                   N E G   P             P VP FPG P  WPY WN   W+       
Sbjct: 303 -------TNEEAGTVSPL------------PKVPCFPGPPPTWPYAWNGVSWTI------ 362

Query: 366 FYPPGIPMPFYPTAPFWGC--TVPGAW-PIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDE 425
                  +PFYP   +W C    PGAW    W+ QP S    P    PNSPTLGKHSRDE
Sbjct: 363 -------LPFYPPPAYWSCPGVSPGAWNSFTWMPQPNS----PSGSNPNSPTLGKHSRDE 422

Query: 426 NVTRQS---DLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVS 485
           N        D  E   ++ +K E+CLW+PKTLRIDDP EAAKSSIW TLGIK D+     
Sbjct: 423 NAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDENADTF 457

Query: 486 EGLFKVFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHESS 503
                  + K    +       P LQ NPAALSRS  FHESS
Sbjct: 483 GAFRSSTKEKSSLSEGRLPGRRPELQANPAALSRSANFHESS 457

[Close]

BLAST of CsaV3_3G041310.1 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 302.4 bits (773), Expect = 6.9e-82
Identity = 217/515 (42.14%), Postives = 267/515 (51.84%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPNHDHDSSSSTFDVDA 60
           M E +DPAIKLFG  IP P                                S+ T + D 
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVF----------------------------ESAVTVEDDE 61

Query: 61  EDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTTT 120
           ED     D  S + V  +L + +   + +   F NS    +  E +      ES     +
Sbjct: 62  EDDWSGGDDKSPEKVTPELSDKNNN-NCNDNSFNNSKPETLDKEEATSTDQIES-----S 121

Query: 121 KTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAG 180
            T E N+ +    KTLKKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAG
Sbjct: 122 DTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAG 181

Query: 181 GTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFGSDA 240
           GTMRNVPVGAGRRKNKSS+SH+R I +SEAL+ AR D         L+ N  VL+FG +A
Sbjct: 182 GTMRNVPVGAGRRKNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEA 241

Query: 241 P---LCESMASILNI-ADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFI 300
               +   M  ++ +  DQ   N  RN F      ++    ENG  DD S  S+ T S  
Sbjct: 242 QQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLADQRLVARVENG--DDCSSGSSVTTSNN 301

Query: 301 NNEEGKTGPQDQVI---------HNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTF 360
           ++ +        V+         +N  G+        PG PWPY WN       +PPP F
Sbjct: 302 HSVDESRAQSGSVVEAQMNNNNNNNMNGY-----ACIPGVPWPYTWN-----PAMPPPGF 361

Query: 361 Y-PPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHA-PNSPTLGKHSRDENV 420
           Y PPG PMPFYP            W IP +    S SP+ Q  +  NSPTLGKH RDE  
Sbjct: 362 YPPPGYPMPFYP-----------YWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGS 421

Query: 421 TRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK 480
           +++ +  E +Q+       C+ +PKTLRIDDP EAAKSSIW TLGIKN+       G+FK
Sbjct: 422 SKKDNETERKQKAG-----CVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAMCKAG-GMFK 446

Query: 481 VFQSKKIDEKNHKTEASPVLQVNPAALSRSIKFHE 501
            F  K     N K E SPVL  NPAALSRS  FHE
Sbjct: 482 GFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHE 446

[Close]

BLAST of CsaV3_3G041310.1 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-56
Identity = 166/398 (41.71%), Postives = 197/398 (49.50%), Query Frame = 0


Query: 107 KVLSGDESNPSTTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQP 166
           +V   +E      T TD+     + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQP
Sbjct: 23  EVADEEEEKNQNKTLTDQ-----SEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQP 82

Query: 167 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNK--SSASHHRQIIVSEALQHARTDVPNGIHH 226
           RHFCK CQRYWT+GGTMR+VP+GAGRRKNK  S  SH+  + +SE               
Sbjct: 83  RHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET-------------- 142

Query: 227 STLKPNANVLAFGSDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDD 286
                N  VL+F              ++ D  + +S R G Q     K+    EN  ND+
Sbjct: 143 -----NGPVLSF--------------SLGDDQKVSSNRFGNQ-----KLVARIEN--NDE 202

Query: 287 QSPESAPTPSFINNEEGKTGPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPP 346
           +S          N   G          NC          FPG  WPY WN          
Sbjct: 203 RSNN--------NTSNGL---------NC----------FPGVSWPYTWN---------- 262

Query: 347 PTFYPPGIPMPFYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDEN 406
           P FY      P YP            W +P +S P S SP        + TLGKHSRD  
Sbjct: 263 PAFY------PVYP-----------YWSMPVLSSPVSSSP--------TSTLGKHSRD-- 296

Query: 407 VTRQSDLGEDEQQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLF 466
                   EDE  K  +    + +PKTLRIDDP EAAKSSIW TLGIKN       E +F
Sbjct: 323 --------EDETVKQKQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIKN-------EVMF 296

Query: 467 KVFQSKKIDEKNHK--TEASPVLQVNPAALSRSIKFHE 501
             F SKK  + ++K  TE S VL  NPAALSRSI FHE
Sbjct: 383 NGFGSKKEVKLSNKEETETSLVLCANPAALSRSINFHE 296

[Close]

BLAST of CsaV3_3G041310.1 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-42
Identity = 173/507 (34.12%), Postives = 242/507 (47.73%), Query Frame = 0


Query: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPILSPPHHTTPLPN-HDHDSSSSTFDVD 60
           MS+ +D  IKLFG+TI          + PSS   LSP H  +  P+  D  SSSS+    
Sbjct: 1   MSKSRDTEIKLFGRTI--TSLLDVNCYDPSS---LSPVHDVSSDPSKEDSSSSSSSCSPT 60

Query: 61  AEDLELDKDAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPSTT 120
              + +      ++S   K    D  +     E   + + +    +SK     +S  +TT
Sbjct: 61  IGPIRVPVKKSEQESNKFK----DPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTT 120

Query: 121 TKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTA 180
           T T   + TS  +   LKKPDK++PCPRC S +TKFCYYNNYNVNQPR+FC+NCQRYWTA
Sbjct: 121 TTT---STTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTA 180

Query: 181 GGTMRNVPVGAGRRKNKS--SASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFG 240
           GG+MRNVPVG+GRRKNK   S++H+        LQ    D  N         +  +L+FG
Sbjct: 181 GGSMRNVPVGSGRRKNKGWPSSNHY--------LQVTSEDCDN-------NNSGTILSFG 240

Query: 241 SDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFIN 300
           S      S +S+                            E G++  QS ++A   +   
Sbjct: 241 S------SESSVT---------------------------ETGKH--QSGDTAKISADSV 300

Query: 301 NEEGKTGPQDQVIHNCQGFLPPHVPFFP--GTPWPYPWNSPQWSSPVPPPTFYPPGIPMP 360
           ++E K         + QGFLPP V   P   +PWPY     QWS   P  +FY    P+P
Sbjct: 301 SQENK---------SYQGFLPPQV-MLPNNSSPWPY-----QWSPTGPNASFY----PVP 360

Query: 361 FYPTAPFWGCTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDE 420
           FY     WGCTVP             + P  +     S  LGK SRD+   R +D     
Sbjct: 361 FY-----WGCTVP-------------IYPTSE----TSSCLGKRSRDQTEGRIND----- 396

Query: 421 QQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSK-KIDE 480
                 T +   + ++LR++   EA+KS++W+ L  K +K  +    LF  F +K   + 
Sbjct: 421 TNTTITTTRARLVSESLRMNI--EASKSAVWSKLPTKPEK-KTQGFSLFNGFDTKGNSNR 396

Query: 481 KNHKTEASPVLQVNPAALSRSIKFHES 502
            +  +E S  LQ NPAA+SR++ F ES
Sbjct: 481 SSLVSETSHSLQANPAAMSRAMNFRES 396

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147502.1	2.2e-292	100.00	cyclic dof factor 2 [Cucumis sativus] >KGN59557.1 hypothetical protein Csa_00105...	[more]
XP_008443398.1	4.3e-267	91.46	PREDICTED: cyclic dof factor 2 [Cucumis melo] >KAA0053774.1 cyclic dof factor 2 ...	[more]
XP_038905359.1	4.7e-250	86.38	cyclic dof factor 2 [Benincasa hispida]	[more]
XP_022156784.1	3.1e-225	79.61	cyclic dof factor 2 [Momordica charantia]	[more]
KAG7022214.1	2.2e-199	72.53	Cyclic dof factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_3G041310.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZL5	2.5e-84	44.44	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	9.8e-81	42.14	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q8W1E3	2.4e-55	41.71	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q9SEZ3	5.8e-41	34.12	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
Q9LQX4	2.3e-29	37.28	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of CsaV3_3G041310.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG12	1.1e-292	100.00	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G825020 PE...	[more]
A0A5A7UEW6	2.1e-267	91.46	Cyclic dof factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G...	[more]
A0A1S3B7G1	2.1e-267	91.46	cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1	[more]
A0A6J1DUM3	1.5e-225	79.61	cyclic dof factor 2 OS=Momordica charantia OX=3673 GN=LOC111023617 PE=4 SV=1	[more]
A0A6J1KZ32	2.4e-199	72.97	cyclic dof factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500061 PE=4 SV=1	[more]

BLAST of CsaV3_3G041310.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39660.1	1.8e-85	44.44	cycling DOF factor 2	[more]
AT5G39660.2	1.8e-85	44.44	cycling DOF factor 2	[more]
AT3G47500.1	6.9e-82	42.14	cycling DOF factor 3	[more]
AT5G62430.1	1.7e-56	41.71	cycling DOF factor 1	[more]
AT1G69570.1	4.1e-42	34.12	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 140..197 e-value: 2.1E-32 score: 111.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 145..181
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 143..197 score: 28.947138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..422
None	No IPR available	PANTHER	PTHR31089:SF45	DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN	coord: 1..501
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 1..501

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G041310	CsaV3_3G041310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G041310.1.exon1	CsaV3_3G041310.1.exon1	exon
CsaV3_3G041310.1.exon2	CsaV3_3G041310.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G041310.1.cds1	CsaV3_3G041310.1.cds1	CDS
CsaV3_3G041310.1.cds2	CsaV3_3G041310.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G041310.1	CsaV3_3G041310.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding