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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATACTACGACTTGCCATAAATTATTTCACCCCAAAAGATCTCATACCAGTGGATAAAGTTGCCCACACGTGTATACCCATGATCACTCTTCTCCAATCAATATGTGATTTTGTACGCACTCCTACAATCCTCTCCTCCACCAAGTACCACTTTGAGCTTACCCTCGAACAAATCTATTTCACTCCCACCACGAGAGCTTGCTCTAAATTTCAAACACCTTCCCTTCACCTTCGGTCACTTGCTCACCCGAGCACAAGCATAGACCACACGTATACTTATCACCAGACTAGAACACAAACAAGACTCACAAAGTTTCTTTGTTCAAATTTGAAGATTTCACTCACACAGTTGGACCTAGACCAAGGCTCGGCTACCAATTATTAG mRNA sequence ATGATACTACGACTTGCCATAAATTATTTCACCCCAAAAGATCTCATACCAGTGGATAAAGTTGCCCACACGTGTATACCCATGATCACTCTTCTCCAATCAATATGTGATTTTGTACGCACTCCTACAATCCTCTCCTCCACCAAGTACCACTTTGAGCTTACCCTCGAACAAATCTATTTCACTCCCACCACGAGAGCTTGCTCTAAATTTCAAACACCTTCCCTTCACCTTCGGTCACTTGCTCACCCGAGCACAAGCATAGACCACACGTATACTTATCACCAGACTAGAACACAAACAAGACTCACAAAGTTTCTTTGTTCAAATTTGAAGATTTCACTCACACAGTTGGACCTAGACCAAGGCTCGGCTACCAATTATTAG Coding sequence (CDS) ATGATACTACGACTTGCCATAAATTATTTCACCCCAAAAGATCTCATACCAGTGGATAAAGTTGCCCACACGTGTATACCCATGATCACTCTTCTCCAATCAATATGTGATTTTGTACGCACTCCTACAATCCTCTCCTCCACCAAGTACCACTTTGAGCTTACCCTCGAACAAATCTATTTCACTCCCACCACGAGAGCTTGCTCTAAATTTCAAACACCTTCCCTTCACCTTCGGTCACTTGCTCACCCGAGCACAAGCATAGACCACACGTATACTTATCACCAGACTAGAACACAAACAAGACTCACAAAGTTTCTTTGTTCAAATTTGAAGATTTCACTCACACAGTTGGACCTAGACCAAGGCTCGGCTACCAATTATTAG Protein sequence MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIYFTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDLDQGSATNY*
Homology
BLAST of CsaV3_3G039510.1 vs. NCBI nr
Match: KGN59371.1 (hypothetical protein Csa_001525 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query: 1 MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY 60
MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY
Sbjct: 1 MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY 60
Query: 61 FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL 120
FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL
Sbjct: 61 FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL 120
Query: 121 DQGSATNY 129
DQGSATNY
Sbjct: 121 DQGSATNY 128
BLAST of CsaV3_3G039510.1 vs. ExPASy TrEMBL
Match: A0A0A0LH50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814380 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query: 1 MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY 60
MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY
Sbjct: 1 MILRLAINYFTPKDLIPVDKVAHTCIPMITLLQSICDFVRTPTILSSTKYHFELTLEQIY 60
Query: 61 FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL 120
FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL
Sbjct: 61 FTPTTRACSKFQTPSLHLRSLAHPSTSIDHTYTYHQTRTQTRLTKFLCSNLKISLTQLDL 120
Query: 121 DQGSATNY 129
DQGSATNY
Sbjct: 121 DQGSATNY 128
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN59371.1 | 2.4e-65 | 100.00 | hypothetical protein Csa_001525 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LH50 | 1.2e-65 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814380 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G039510.1.exon1 | CsaV3_3G039510.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G039510.1.cds1 | CsaV3_3G039510.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G039510.1 | CsaV3_3G039510.1-protein | polypeptide |
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