CsaV3_3G039270.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G039270.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr3: 32254521 .. 32256317 (+)
Sequence length	1797
RNA-Seq Expression	CsaV3_3G039270.1
Synteny	CsaV3_3G039270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

mRNA sequence

ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

Coding sequence (CDS)

ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

Protein sequence

MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW*

Homology

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BLAST of CsaV3_3G039270.1 vs. NCBI nr
Match: XP_004136748.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis sativus] >KGN59347.1 hypothetical protein Csa_001112 [Cucumis sativus])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

[Close]

BLAST of CsaV3_3G039270.1 vs. NCBI nr
Match: XP_008443125.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis melo] >KAA0043690.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25442.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 580/598 (96.99%), Postives = 592/598 (99.00%), Query Frame = 0


Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           +VSH+LINLYSK QLPL SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  VVSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFL R +VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           T LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TLLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS+LYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA+FVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           +LEM+S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 VLEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

[Close]

BLAST of CsaV3_3G039270.1 vs. NCBI nr
Match: KAG6580831.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 549/597 (91.96%), Postives = 578/597 (96.82%), Query Frame = 0


Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLAKGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVEKGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

[Close]

BLAST of CsaV3_3G039270.1 vs. NCBI nr
Match: KAG7017586.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1126.7 bits (2913), Expect = 0.0e+00
Identity = 548/597 (91.79%), Postives = 578/597 (96.82%), Query Frame = 0


Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQT+PL
Sbjct: 88  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLAKGLQLHAHIVKFGLQTVPL 147

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 148 VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 207

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 208 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 267

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 268 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 327

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 328 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 387

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 388 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVEKGREYFNLMRDYGIEP 447

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 448 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 507

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 508 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 567

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 568 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 627

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 628 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 684

[Close]

BLAST of CsaV3_3G039270.1 vs. NCBI nr
Match: XP_022934208.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moschata])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 547/597 (91.62%), Postives = 578/597 (96.82%), Query Frame = 0


Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLAKGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVE+GREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVERGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAA+KFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAMKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 3.7e-244
Identity = 405/586 (69.11%), Postives = 489/586 (83.45%), Query Frame = 0


Query: 16  LNQNSFE---QNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 75
           LN ++F     NY QIC+LLLS  R+RS  +GLQLH +++K GL  IPLV++NLIN YSK
Sbjct: 3   LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62

Query: 76  TQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 135
           +QLP  S + F+++P+KSSTTWSS+IS FAQNE P ++L+F ++M+   +RPDDH+ PSA
Sbjct: 63  SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122

Query: 136 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 195
           TK+C  L R D+G+SVHCL++KTGY  DVFVGSSLVDMYAKCGEI  AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182

Query: 196 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 255
           V+WSGM+YGYAQ+ +  EAL LFK+AL E++ VND++FSSVI VC++ST LELG+ IHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242

Query: 256 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 315
            +K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302

Query: 316 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 375
             LF+ M   GMKPNFI+FL+VL ACSHAGLV++GR YF  M++  IEP  +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362

Query: 376 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLH 435
           LGRAG+LQEA+ VI  MP+ PTESVWGALLT C +HK+TE+AAF AD++ E+   SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422

Query: 436 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 495
           + LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K  EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482

Query: 496 EKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVM 555
           EKL EL EEMEKAGY+ADTS+VLR VDG+EKN+TIRYHSERLAIAFGLITFP  RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542

Query: 556 KNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           KNLRVCGDCH AIKFMS C  RV+IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.5e-141
Identity = 252/595 (42.35%), Postives = 371/595 (62.35%), Query Frame = 0


Query: 4   STSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVS 63
           S    ++ S N L  +    + R    LL   T  + L QG  +HAHIL+   +   ++ 
Sbjct: 39  SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98

Query: 64  HNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVR 123
           + L+N+Y+K      + +VF++ P++   TW+++IS ++Q++ P  AL FF +ML  G  
Sbjct: 99  NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158

Query: 124 PDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHL 183
           P++    S  KA    RR   G  +H   VK G+  +V VGS+L+D+Y + G + DA+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218

Query: 184 FDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFL 243
           FD +  RN VSW+ +I G+A+     +AL LF+  L +    + F+++S+   CSS+ FL
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278

Query: 244 ELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIAC 303
           E GK +H   +K      +F G+ L+ +Y+K G I  A ++FD +  R++  WNS+L A 
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338

Query: 304 AQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPET 363
           AQH   +     FEEM  VG++PN ISFLSVL ACSH+GL+++G  Y+ LM+  GI PE 
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398

Query: 364 EHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
            HY ++VDLLGRAG L  A+  I++MP+ PT ++W ALL  CR+HK+TE+ A+ A+ + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458

Query: 424 MDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDR 483
           +D    G HV+L N YA+ GR+ +AAR+RK +++ GVKKE   SWVE  N +H F A D 
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518

Query: 484 SHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITF 543
            H +  EI  K EE+  ++++ GYV DTS V+  VD +E+   ++YHSE++A+AF L+  
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578

Query: 544 PPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           PPG  I + KN+RVCGDCH AIK  SK  GR +IVRD NRFH F+DG CSC DYW
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.9e-131
Identity = 231/525 (44.00%), Postives = 343/525 (65.33%), Query Frame = 0


Query: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140
           Q+FDE+P +   TW++++S + QN     A + F +M      P+ +         G+++
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQ 330

Query: 141 --RSDVGKSVH----CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVS 200
             R ++ K +     C  V T         ++++  YA+CG+I +A++LFD+MP+R+ VS
Sbjct: 331 GERMEMAKELFDVMPCRNVST--------WNTMITGYAQCGKISEAKNLFDKMPKRDPVS 390

Query: 201 WSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCL 260
           W+ MI GY+Q     EAL LF Q   E   +N  +FSS +  C+    LELGK +HG  +
Sbjct: 391 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 450

Query: 261 KMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFG 320
           K  +++  FVG+AL+ +Y KCG IE A  +F E+  +++  WN+M+   ++H   +    
Sbjct: 451 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 510

Query: 321 LFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLL 380
            FE M   G+KP+  + ++VL ACSH GLV+KGR+YF ++ +DYG+ P ++HYA +VDLL
Sbjct: 511 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 570

Query: 381 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 440
           GRAG L++A +++K MP  P  ++WG LL   R+H +TE+A   AD+I  M+  +SG++V
Sbjct: 571 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 630

Query: 441 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYE 500
           LLSN YA++GR+ +  ++R  +RD+GVKK  G SW+E  NK HTF+ GD  H +  EI+ 
Sbjct: 631 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 690

Query: 501 KLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMK 560
            LEEL+  M+KAGYV+ TS VL  V+ EEK   +RYHSERLA+A+G++    GRPIRV+K
Sbjct: 691 FLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIK 750

Query: 561 NLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           NLRVC DCH AIK+M++  GR++I+RDNNRFH F+DG CSCGDYW
Sbjct: 751 NLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 469.2 bits (1206), Expect = 7.2e-131
Identity = 235/576 (40.80%), Postives = 348/576 (60.42%), Query Frame = 0


Query: 24  NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
           N   +  +L    R+ ++ +    H  I++  L+    + + LIN YSK      + QVF
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 84  DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143
           D   ++S  +W+++I  + +N     AL  F  M N+G +  +    S   ACG    + 
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203
             K +HCL+VKT    +++VG++L+D+YAKCG I DA  +F+ M +++ V+WS M+ GY 
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239

Query: 204 QLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSF 263
           Q  +  EAL L+++A    ++ N FT SSVI  CS+   L  GK +H +  K  F S+ F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299

Query: 264 VGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVG 323
           V S+ + +Y+KCG +  +Y +F E+  +NL LWN+++   A+HA  + V  LFE+M   G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359

Query: 324 MKPNFISFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEA 383
           M PN ++F S+L  C H GLVE+GR +F LMR  YG+ P   HY+ +VD+LGRAG L EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419

Query: 384 VSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAA 443
             +IK +P  PT S+WG+LL  CR++K+ E+A   A+++ E++  ++G HVLLSN YAA 
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479

Query: 444 GRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEM 503
            ++EE A+ RK+LRD  VKK  G SW++  +KVHTF+ G+  H +  EI   L+ L  + 
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539

Query: 504 EKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCH 563
            K GY       L  V+  +K E +  HSE+LA+ FGL+  P   P+R+MKNLR+C DCH
Sbjct: 540 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 599

Query: 564 AAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
             +K  S    R +IVRD NRFH F DG CSCGD+W
Sbjct: 600 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.6e-128
Identity = 248/608 (40.79%), Postives = 355/608 (58.39%), Query Frame = 0


Query: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK----------------- 89
           ++L S T    LR G  +H  I++ G+       + L+N+Y+K                 
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 90  ---------------TQLPLFSL----QVFDETPKKSSTTWSSVISAFAQNEAPLLALQF 149
                          T +  F +    +VF+  P+K   +++++I+ +AQ+     AL+ 
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 150 FRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVFVGSSLVDMY 209
            R M    ++PD     S      F    DV  GK +H   ++ G   DV++GSSLVDMY
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPI--FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 289

Query: 210 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 269
           AK   I D+  +F  +  R+ +SW+ ++ GY Q     EAL LF+Q +   V      FS
Sbjct: 290 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 349

Query: 270 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 329
           SVI  C+    L LGK +HG  L+  F S+ F+ SAL+ +YSKCG I+ A ++FD +   
Sbjct: 350 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 409

Query: 330 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 389
           +   W ++++  A H H      LFEEM   G+KPN ++F++VL ACSH GLV++   YF
Sbjct: 410 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 469

Query: 390 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 449
            S+ + YG+  E EHYA++ DLLGRAGKL+EA + I +M + PT SVW  LL+ C +HK+
Sbjct: 470 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 529

Query: 450 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 509
            E+A  VA++I  +DS + G +VL+ N YA+ GR++E A++R  +R +G++K+   SW+E
Sbjct: 530 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 589

Query: 510 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 569
             NK H F +GDRSH    +I E L+ + E+MEK GYVADTS VL  VD E K E +  H
Sbjct: 590 MKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 649

Query: 570 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 599
           SERLA+AFG+I   PG  IRV KN+R+C DCH AIKF+SK   R +IVRDN+RFH F  G
Sbjct: 650 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 709

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL
Match: A0A0A0LF65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812190 PE=3 SV=1)

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL
Match: A0A5D3DPH6 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005870 PE=3 SV=1)

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 580/598 (96.99%), Postives = 592/598 (99.00%), Query Frame = 0


Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           +VSH+LINLYSK QLPL SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  VVSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFL R +VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           T LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TLLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS+LYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA+FVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           +LEM+S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 VLEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL
Match: A0A1S3B830 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo OX=3656 GN=LOC103486811 PE=3 SV=1)

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 580/598 (96.99%), Postives = 592/598 (99.00%), Query Frame = 0


Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           +VSH+LINLYSK QLPL SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  VVSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFL R +VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           T LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TLLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS+LYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA+FVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           +LEM+S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 VLEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL
Match: A0A6J1F715 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita moschata OX=3662 GN=LOC111441450 PE=3 SV=1)

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 547/597 (91.62%), Postives = 578/597 (96.82%), Query Frame = 0


Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLAKGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVE+GREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVERGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAA+KFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAMKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

[Close]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL
Match: A0A6J1J5S6 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita maxima OX=3661 GN=LOC111481599 PE=3 SV=1)

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 544/597 (91.12%), Postives = 576/597 (96.48%), Query Frame = 0


Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLARGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL+FFRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEFFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESSEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCG+IEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGIIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG++GMKPNFISFLSVLYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSLGMKPNFISFLSVLYACSHAGLVEKGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRK+LRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKLLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEM +AGYVADTSFVLRAVDGEEK+ETIR+HSERLAI FGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMAEAGYVADTSFVLRAVDGEEKSETIRFHSERLAIVFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

[Close]

BLAST of CsaV3_3G039270.1 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 845.5 bits (2183), Expect = 2.6e-245
Identity = 405/586 (69.11%), Postives = 489/586 (83.45%), Query Frame = 0


Query: 16  LNQNSFE---QNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 75
           LN ++F     NY QIC+LLLS  R+RS  +GLQLH +++K GL  IPLV++NLIN YSK
Sbjct: 3   LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62

Query: 76  TQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 135
           +QLP  S + F+++P+KSSTTWSS+IS FAQNE P ++L+F ++M+   +RPDDH+ PSA
Sbjct: 63  SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122

Query: 136 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 195
           TK+C  L R D+G+SVHCL++KTGY  DVFVGSSLVDMYAKCGEI  AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182

Query: 196 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 255
           V+WSGM+YGYAQ+ +  EAL LFK+AL E++ VND++FSSVI VC++ST LELG+ IHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242

Query: 256 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 315
            +K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302

Query: 316 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 375
             LF+ M   GMKPNFI+FL+VL ACSHAGLV++GR YF  M++  IEP  +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362

Query: 376 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLH 435
           LGRAG+LQEA+ VI  MP+ PTESVWGALLT C +HK+TE+AAF AD++ E+   SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422

Query: 436 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 495
           + LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K  EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482

Query: 496 EKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVM 555
           EKL EL EEMEKAGY+ADTS+VLR VDG+EKN+TIRYHSERLAIAFGLITFP  RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542

Query: 556 KNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           KNLRVCGDCH AIKFMS C  RV+IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

[Close]

BLAST of CsaV3_3G039270.1 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-136
Identity = 245/586 (41.81%), Postives = 364/586 (62.12%), Query Frame = 0


Query: 4   STSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVS 63
           S    ++ S N L  +    + R    LL   T  + L QG  +HAHIL+   +   ++ 
Sbjct: 39  SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98

Query: 64  HNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVR 123
           + L+N+Y+K      + +VF++ P++   TW+++IS ++Q++ P  AL FF +ML  G  
Sbjct: 99  NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158

Query: 124 PDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHL 183
           P++    S  KA    RR   G  +H   VK G+  +V VGS+L+D+Y + G + DA+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218

Query: 184 FDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFL 243
           FD +  RN VSW+ +I G+A+     +AL LF+  L +    + F+++S+   CSS+ FL
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278

Query: 244 ELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIAC 303
           E GK +H   +K      +F G+ L+ +Y+K G I  A ++FD +  R++  WNS+L A 
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338

Query: 304 AQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPET 363
           AQH   +     FEEM  VG++PN ISFLSVL ACSH+GL+++G  Y+ LM+  GI PE 
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398

Query: 364 EHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
            HY ++VDLLGRAG L  A+  I++MP+ PT ++W ALL  CR+HK+TE+ A+ A+ + E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458

Query: 424 MDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDR 483
           +D    G HV+L N YA+ GR+ +AAR+RK +++ GVKKE   SWVE  N +H F A D 
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518

Query: 484 SHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITF 543
            H +  EI  K EE+  ++++ GYV DTS V+  VD +E+   ++YHSE++A+AF L+  
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578

Query: 544 PPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFED 590
           PPG  I + KN+RVCGDCH AIK  SK  GR +IVRD NRFH F+D
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624

[Close]

BLAST of CsaV3_3G039270.1 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-132
Identity = 231/525 (44.00%), Postives = 343/525 (65.33%), Query Frame = 0


Query: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140
           Q+FDE+P +   TW++++S + QN     A + F +M      P+ +         G+++
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQ 330

Query: 141 --RSDVGKSVH----CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVS 200
             R ++ K +     C  V T         ++++  YA+CG+I +A++LFD+MP+R+ VS
Sbjct: 331 GERMEMAKELFDVMPCRNVST--------WNTMITGYAQCGKISEAKNLFDKMPKRDPVS 390

Query: 201 WSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCL 260
           W+ MI GY+Q     EAL LF Q   E   +N  +FSS +  C+    LELGK +HG  +
Sbjct: 391 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 450

Query: 261 KMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFG 320
           K  +++  FVG+AL+ +Y KCG IE A  +F E+  +++  WN+M+   ++H   +    
Sbjct: 451 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 510

Query: 321 LFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLL 380
            FE M   G+KP+  + ++VL ACSH GLV+KGR+YF ++ +DYG+ P ++HYA +VDLL
Sbjct: 511 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 570

Query: 381 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 440
           GRAG L++A +++K MP  P  ++WG LL   R+H +TE+A   AD+I  M+  +SG++V
Sbjct: 571 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 630

Query: 441 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYE 500
           LLSN YA++GR+ +  ++R  +RD+GVKK  G SW+E  NK HTF+ GD  H +  EI+ 
Sbjct: 631 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 690

Query: 501 KLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMK 560
            LEEL+  M+KAGYV+ TS VL  V+ EEK   +RYHSERLA+A+G++    GRPIRV+K
Sbjct: 691 FLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIK 750

Query: 561 NLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           NLRVC DCH AIK+M++  GR++I+RDNNRFH F+DG CSCGDYW
Sbjct: 751 NLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of CsaV3_3G039270.1 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 469.2 bits (1206), Expect = 5.1e-132
Identity = 235/576 (40.80%), Postives = 348/576 (60.42%), Query Frame = 0


Query: 24  NYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVF 83
           N   +  +L    R+ ++ +    H  I++  L+    + + LIN YSK      + QVF
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 84  DETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD 143
           D   ++S  +W+++I  + +N     AL  F  M N+G +  +    S   ACG    + 
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203
             K +HCL+VKT    +++VG++L+D+YAKCG I DA  +F+ M +++ V+WS M+ GY 
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239

Query: 204 QLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSF 263
           Q  +  EAL L+++A    ++ N FT SSVI  CS+   L  GK +H +  K  F S+ F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299

Query: 264 VGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVG 323
           V S+ + +Y+KCG +  +Y +F E+  +NL LWN+++   A+HA  + V  LFE+M   G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359

Query: 324 MKPNFISFLSVLYACSHAGLVEKGREYFSLMR-DYGIEPETEHYASLVDLLGRAGKLQEA 383
           M PN ++F S+L  C H GLVE+GR +F LMR  YG+ P   HY+ +VD+LGRAG L EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419

Query: 384 VSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAA 443
             +IK +P  PT S+WG+LL  CR++K+ E+A   A+++ E++  ++G HVLLSN YAA 
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479

Query: 444 GRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEM 503
            ++EE A+ RK+LRD  VKK  G SW++  +KVHTF+ G+  H +  EI   L+ L  + 
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539

Query: 504 EKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCH 563
            K GY       L  V+  +K E +  HSE+LA+ FGL+  P   P+R+MKNLR+C DCH
Sbjct: 540 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 599

Query: 564 AAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
             +K  S    R +IVRD NRFH F DG CSCGD+W
Sbjct: 600 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635

[Close]

BLAST of CsaV3_3G039270.1 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-129
Identity = 248/608 (40.79%), Postives = 355/608 (58.39%), Query Frame = 0


Query: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK----------------- 89
           ++L S T    LR G  +H  I++ G+       + L+N+Y+K                 
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 90  ---------------TQLPLFSL----QVFDETPKKSSTTWSSVISAFAQNEAPLLALQF 149
                          T +  F +    +VF+  P+K   +++++I+ +AQ+     AL+ 
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 150 FRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVFVGSSLVDMY 209
            R M    ++PD     S      F    DV  GK +H   ++ G   DV++GSSLVDMY
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPI--FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 289

Query: 210 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 269
           AK   I D+  +F  +  R+ +SW+ ++ GY Q     EAL LF+Q +   V      FS
Sbjct: 290 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 349

Query: 270 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 329
           SVI  C+    L LGK +HG  L+  F S+ F+ SAL+ +YSKCG I+ A ++FD +   
Sbjct: 350 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 409

Query: 330 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 389
           +   W ++++  A H H      LFEEM   G+KPN ++F++VL ACSH GLV++   YF
Sbjct: 410 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 469

Query: 390 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 449
            S+ + YG+  E EHYA++ DLLGRAGKL+EA + I +M + PT SVW  LL+ C +HK+
Sbjct: 470 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 529

Query: 450 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 509
            E+A  VA++I  +DS + G +VL+ N YA+ GR++E A++R  +R +G++K+   SW+E
Sbjct: 530 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 589

Query: 510 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 569
             NK H F +GDRSH    +I E L+ + E+MEK GYVADTS VL  VD E K E +  H
Sbjct: 590 MKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 649

Query: 570 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 599
           SERLA+AFG+I   PG  IRV KN+R+C DCH AIKF+SK   R +IVRDN+RFH F  G
Sbjct: 650 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 709

The following BLAST results are available for this feature:

BLAST of CsaV3_3G039270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136748.1	0.0e+00	100.00	putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis sativus]...	[more]
XP_008443125.1	0.0e+00	96.99	PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucum...	[more]
KAG6580831.1	0.0e+00	91.96	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
KAG7017586.1	0.0e+00	91.79	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022934208.1	0.0e+00	91.62	putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moscha...	[more]

BLAST of CsaV3_3G039270.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTF4	3.7e-244	69.11	Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th...	[more]
Q9LIQ7	1.5e-141	42.35	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9SY02	1.9e-131	44.00	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9LZ19	7.2e-131	40.80	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q9LW63	2.6e-128	40.79	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]

BLAST of CsaV3_3G039270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF65	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812190 PE=3 SV=1	[more]
A0A5D3DPH6	0.0e+00	96.99	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3B830	0.0e+00	96.99	putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo O...	[more]
A0A6J1F715	0.0e+00	91.62	putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita mosc...	[more]
A0A6J1J5S6	0.0e+00	91.12	putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita maxi...	[more]

BLAST of CsaV3_3G039270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52630.1	2.6e-245	69.11	mitochondrial RNAediting factor 1	[more]
AT3G24000.1	1.2e-136	41.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	1.3e-132	44.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G04780.1	5.1e-132	40.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	1.8e-129	40.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 330..361 e-value: 2.9E-5 score: 21.9 coord: 166..193 e-value: 3.3E-4 score: 18.6 coord: 93..125 e-value: 3.6E-4 score: 18.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 93..122 e-value: 4.7E-4 score: 20.2 coord: 165..192 e-value: 6.9E-4 score: 19.7 coord: 437..460 e-value: 0.61 score: 10.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..194 score: 10.128299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 9.766576
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 9.580234
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 90..124 score: 10.775016
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 203..385 e-value: 4.1E-9 score: 36.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 6..140 e-value: 2.4E-12 score: 48.5 coord: 141..244 e-value: 7.2E-20 score: 73.1 coord: 245..341 e-value: 2.2E-15 score: 58.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 343..528 e-value: 2.2E-17 score: 65.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 171..450
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 465..588 e-value: 4.1E-37 score: 126.9
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 7..541
None	No IPR available	PANTHER	PTHR47925:SF14	BNAA10G28390D PROTEIN	coord: 7..541

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G039270	CsaV3_3G039270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G039270.1.exon1	CsaV3_3G039270.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G039270.1.cds1	CsaV3_3G039270.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G039270.1	CsaV3_3G039270.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding